RNA–Protein interactions for RNA: ENST00000490231.5

NUP58-213, Transcript of nucleoporin 58, humanhuman

TSL 4

Gene NUP58, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-213ENST00000490231 RAB3CQ96E17 227 aa11.94□□□□□ -0.5
NUP58-213ENST00000490231 THAP7Q9BT49 309 aaPredicted RBP11.94□□□□□ -0.5
NUP58-213ENST00000490231 ACOT13Q9NPJ3 140 aa11.94□□□□□ -0.5
NUP58-213ENST00000490231 COA4Q9NYJ1 87 aa11.94□□□□□ -0.5
NUP58-213ENST00000490231 SACSQ9NZJ4 4579 aa11.94□□□□□ -0.5
NUP58-213ENST00000490231 RGS10O43665 173 aa11.93□□□□□ -0.5
NUP58-213ENST00000490231 OR2A4O95047 310 aa11.93□□□□□ -0.5
NUP58-213ENST00000490231 CSN3P07498 182 aa11.93□□□□□ -0.5
NUP58-213ENST00000490231 FABP5Q01469 135 aa11.93□□□□□ -0.5
NUP58-213ENST00000490231 PLA2G7Q13093 441 aa11.93□□□□□ -0.5
NUP58-213ENST00000490231 HAGHQ16775 308 aa11.93□□□□□ -0.5
NUP58-213ENST00000490231 MRGPRG-AS1Q2M3A8 158 aa11.93□□□□□ -0.5
NUP58-213ENST00000490231 ZFAND6Q6FIF0 208 aa11.93□□□□□ -0.5
NUP58-213ENST00000490231 LCN12Q6JVE5 192 aa11.93□□□□□ -0.5
NUP58-213ENST00000490231 GTSCR1Q86UQ5 136 aa11.93□□□□□ -0.5
NUP58-213ENST00000490231 Q8N402 240 aa11.93□□□□□ -0.5
NUP58-213ENST00000490231 TEX45Q8NA69 505 aa11.93□□□□□ -0.5
NUP58-213ENST00000490231 DDB2Q92466 427 aa11.93□□□□□ -0.5
NUP58-213ENST00000490231 C5orf30Q96GV9 206 aa11.93□□□□□ -0.5
NUP58-213ENST00000490231 PHB2Q99623 299 aa11.93□□□□□ -0.5
NUP58-213ENST00000490231 CENPOQ9BU64 300 aa11.93□□□□□ -0.5
NUP58-213ENST00000490231 MSGN1A6NI15 193 aa11.92□□□□□ -0.5
NUP58-213ENST00000490231 MFNGO00587 321 aa11.92□□□□□ -0.5
NUP58-213ENST00000490231 TRBV12-3P01733 135 aa11.92□□□□□ -0.5
NUP58-213ENST00000490231 GADD45AP24522 165 aa11.92□□□□□ -0.5
NUP58-213ENST00000490231 UBE2KP61086 200 aa11.92□□□□□ -0.5
NUP58-213ENST00000490231 DEFA5Q01523 94 aa11.92□□□□□ -0.5
NUP58-213ENST00000490231 PRSS8Q16651 343 aa11.92□□□□□ -0.5
NUP58-213ENST00000490231 RPEL1Q2QD12 228 aa11.92□□□□□ -0.5
NUP58-213ENST00000490231 VMA21Q3ZAQ7 101 aa11.92□□□□□ -0.5
NUP58-213ENST00000490231 HES5Q5TA89 166 aa11.92□□□□□ -0.5
NUP58-213ENST00000490231 ADAD2Q8NCV1 583 aaKnown RBP11.92□□□□□ -0.5
NUP58-213ENST00000490231 OR10R2Q8NGX6 335 aa11.92□□□□□ -0.5
NUP58-213ENST00000490231 SNAPC3Q92966 411 aa11.92□□□□□ -0.5
NUP58-213ENST00000490231 ADTRPQ96IZ2 230 aa11.92□□□□□ -0.5
NUP58-213ENST00000490231 MGLLQ99685 303 aa11.92□□□□□ -0.5
NUP58-213ENST00000490231 GAR1Q9NY12 217 aaKnown RBP11.92□□□□□ -0.5
NUP58-213ENST00000490231 CSMD3Q7Z407 3707 aa11.91□□□□□ -0.5
NUP58-213ENST00000490231 LYSTQ99698 3801 aa11.91□□□□□ -0.5
NUP58-213ENST00000490231 RBMXL2O75526 392 aaKnown RBP11.91□□□□□ -0.5
NUP58-213ENST00000490231 IFNA6P05013 189 aa11.91□□□□□ -0.5
NUP58-213ENST00000490231 OR9G9P0C7N8 305 aa11.91□□□□□ -0.5
NUP58-213ENST00000490231 HIST1H1DP16402 221 aaKnown RBP11.91□□□□□ -0.5
NUP58-213ENST00000490231 DUTP33316 252 aaKnown RBP11.91□□□□□ -0.5
NUP58-213ENST00000490231 MECP2P51608 486 aaKnown RBP11.91□□□□□ -0.5
NUP58-213ENST00000490231 Q6ZS49 121 aa11.91□□□□□ -0.5
NUP58-213ENST00000490231 PRSS48Q7RTY5 328 aa11.91□□□□□ -0.5
NUP58-213ENST00000490231 OR2K2Q8NGT1 345 aa11.91□□□□□ -0.5
NUP58-213ENST00000490231 OSR1Q8TAX0 266 aaPredicted RBP11.91□□□□□ -0.5
NUP58-213ENST00000490231 GINS4Q9BRT9 223 aa11.91□□□□□ -0.5
NUP58-213ENST00000490231 TUBA4BQ9H853 241 aa11.91□□□□□ -0.5
NUP58-213ENST00000490231 PEMTQ9UBM1 199 aa11.91□□□□□ -0.5
NUP58-213ENST00000490231 ADAM30Q9UKF2 790 aa11.91□□□□□ -0.5
NUP58-213ENST00000490231 RBM7Q9Y580 266 aaKnown RBP11.91□□□□□ -0.5
NUP58-213ENST00000490231 A0A0B4J203 849 aa11.9□□□□□ -0.5
NUP58-213ENST00000490231 FAM223BA6NKX1 122 aa11.9□□□□□ -0.5
NUP58-213ENST00000490231 RAB27BO00194 218 aa11.9□□□□□ -0.5
NUP58-213ENST00000490231 PDCD5O14737 125 aa11.9□□□□□ -0.5
NUP58-213ENST00000490231 AIREO43918 545 aa11.9□□□□□ -0.5
NUP58-213ENST00000490231 GNB3P16520 340 aa11.9□□□□□ -0.5
NUP58-213ENST00000490231 RAB6AP20340 208 aa11.9□□□□□ -0.5
NUP58-213ENST00000490231 TNXAQ16473 311 aa11.9□□□□□ -0.5
NUP58-213ENST00000490231 FAM223AQ8IWN6 122 aa11.9□□□□□ -0.5
NUP58-213ENST00000490231 SRSF12Q8WXF0 261 aaKnown RBP11.9□□□□□ -0.5
NUP58-213ENST00000490231 MAFIPQ8WZ33 124 aa11.9□□□□□ -0.5
NUP58-213ENST00000490231 CCDC90BQ9GZT6 254 aa11.9□□□□□ -0.5
NUP58-213ENST00000490231 ZNF230Q9UIE0 474 aaPredicted RBP11.9□□□□□ -0.5
NUP58-213ENST00000490231 STARD9Q9P2P6 4700 aa11.89□□□□□ -0.51
NUP58-213ENST00000490231 TRBV9A0A0B4J1U6 114 aa11.89□□□□□ -0.51
NUP58-213ENST00000490231 TRAV1-2A0A0B4J238 106 aa11.89□□□□□ -0.51
NUP58-213ENST00000490231 IFITM5A6NNB3 132 aa11.89□□□□□ -0.51
NUP58-213ENST00000490231 LINC00473A8K010 186 aa11.89□□□□□ -0.51
NUP58-213ENST00000490231 ANKRD65E5RJM6 399 aa11.89□□□□□ -0.51
NUP58-213ENST00000490231 CREBL2O60519 120 aaPredicted RBP11.89□□□□□ -0.51
NUP58-213ENST00000490231 CRYZL1O95825 349 aa11.89□□□□□ -0.51
NUP58-213ENST00000490231 APELAP0DMC3 54 aa11.89□□□□□ -0.51
NUP58-213ENST00000490231 CRHBPP24387 322 aa11.89□□□□□ -0.51
NUP58-213ENST00000490231 AQP4P55087 323 aa11.89□□□□□ -0.51
NUP58-213ENST00000490231 IDO2Q6ZQW0 420 aa11.89□□□□□ -0.51
NUP58-213ENST00000490231 H1FOOQ8IZA3 346 aaPredicted RBP11.89□□□□□ -0.51
NUP58-213ENST00000490231 AKIP1Q9NQ31 210 aa11.89□□□□□ -0.51
NUP58-213ENST00000490231 A0A075B6Q4 140 aa11.88□□□□□ -0.51
NUP58-213ENST00000490231 SHISA3A0PJX4 238 aa11.88□□□□□ -0.51
NUP58-213ENST00000490231 IZUMO1RA6ND01 250 aa11.88□□□□□ -0.51
NUP58-213ENST00000490231 METTL21EPA6NDL7 271 aa11.88□□□□□ -0.51
NUP58-213ENST00000490231 BMPR1BO00238 502 aa11.88□□□□□ -0.51
NUP58-213ENST00000490231 MPPED1O15442 326 aa11.88□□□□□ -0.51
NUP58-213ENST00000490231 TALDO1P37837 337 aa11.88□□□□□ -0.51
NUP58-213ENST00000490231 RHOGP84095 191 aa11.88□□□□□ -0.51
NUP58-213ENST00000490231 LAX1Q8IWV1 398 aa11.88□□□□□ -0.51
NUP58-213ENST00000490231 ACOT12Q8WYK0 555 aa11.88□□□□□ -0.51
NUP58-213ENST00000490231 SPIN2AQ99865 258 aa11.88□□□□□ -0.51
NUP58-213ENST00000490231 SPIN2BQ9BPZ2 258 aa11.88□□□□□ -0.51
NUP58-213ENST00000490231 ZNF430Q9H8G1 570 aaPredicted RBP11.88□□□□□ -0.51
NUP58-213ENST00000490231 NKX1-2Q9UD57 310 aaPredicted RBP11.88□□□□□ -0.51
NUP58-213ENST00000490231 DNAH1Q9P2D7 4330 aa11.88□□□□□ -0.51
NUP58-213ENST00000490231 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.87□□□□□ -0.51
NUP58-213ENST00000490231 TUSC2O75896 110 aa11.87□□□□□ -0.51
NUP58-213ENST00000490231 ACTL6BO94805 426 aa11.87□□□□□ -0.51
NUP58-213ENST00000490231 SAA1P0DJI8 122 aaPredicted RBP11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms