RNA–Protein interactions for RNA: ENST00000482217.1

VPS41-212, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 951 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-212ENST00000482217 ZNF71Q9NQZ8 489 aaPredicted RBP3.11□□□□□ -1.91
VPS41-212ENST00000482217 SPANXCQ9NY87 97 aa3.11□□□□□ -1.91
VPS41-212ENST00000482217 TVP23BQ9NYZ1 205 aa3.11□□□□□ -1.91
VPS41-212ENST00000482217 SHPKQ9UHJ6 478 aa3.11□□□□□ -1.91
VPS41-212ENST00000482217 RPUSD1Q9UJJ7 312 aaKnown RBP3.11□□□□□ -1.91
VPS41-212ENST00000482217 DNAJC12Q9UKB3 198 aa3.11□□□□□ -1.91
VPS41-212ENST00000482217 UGT2A1Q9Y4X1 527 aa3.11□□□□□ -1.91
VPS41-212ENST00000482217 DOCK4Q8N1I0 1966 aa3.11□□□□□ -1.91
VPS41-212ENST00000482217 OVOS2A0A0G2JMS6 1433 aa3.1□□□□□ -1.91
VPS41-212ENST00000482217 SCN2AQ99250 2005 aa3.1□□□□□ -1.91
VPS41-212ENST00000482217 KIF26BQ2KJY2 2108 aa3.1□□□□□ -1.91
VPS41-212ENST00000482217 RALGAPA2Q2PPJ7 1873 aa3.1□□□□□ -1.91
VPS41-212ENST00000482217 IGHV4-4A0A075B6R2 117 aa3.1□□□□□ -1.91
VPS41-212ENST00000482217 TRAV30A0A087WSZ9 112 aa3.1□□□□□ -1.91
VPS41-212ENST00000482217 A0A087WYN8 130 aa3.1□□□□□ -1.91
VPS41-212ENST00000482217 TRAV4A0A0B4J268 109 aa3.1□□□□□ -1.91
VPS41-212ENST00000482217 LOC389332A0A1B0GUA5 103 aa3.1□□□□□ -1.91
VPS41-212ENST00000482217 IQCMA0A1B0GVH7 501 aa3.1□□□□□ -1.91
VPS41-212ENST00000482217 DHRS12A0PJE2 317 aa3.1□□□□□ -1.91
VPS41-212ENST00000482217 RIIAD1A6NNX1 92 aa3.1□□□□□ -1.91
VPS41-212ENST00000482217 FAM220BPB1ANY3 271 aa3.1□□□□□ -1.91
VPS41-212ENST00000482217 H3BQF6 201 aa3.1□□□□□ -1.91
VPS41-212ENST00000482217 RBFOX2O43251 390 aaKnown RBP eCLIP3.1□□□□□ -1.91
VPS41-212ENST00000482217 BCL2L11O43521 198 aa3.1□□□□□ -1.91
VPS41-212ENST00000482217 GYPCP04921 128 aa3.1□□□□□ -1.91
VPS41-212ENST00000482217 CRYBA1P05813 215 aa3.1□□□□□ -1.91
VPS41-212ENST00000482217 CD48P09326 243 aa3.1□□□□□ -1.91
VPS41-212ENST00000482217 SCTP09683 121 aa3.1□□□□□ -1.91
VPS41-212ENST00000482217 TDGF1P13385 188 aa3.1□□□□□ -1.91
VPS41-212ENST00000482217 LPAR6P43657 344 aa3.1□□□□□ -1.91
VPS41-212ENST00000482217 ZNF140P52738 457 aaPredicted RBP3.1□□□□□ -1.91
VPS41-212ENST00000482217 ERCC8Q13216 396 aa3.1□□□□□ -1.91
VPS41-212ENST00000482217 KRTAP24-1Q3LI83 254 aa3.1□□□□□ -1.91
VPS41-212ENST00000482217 SCGB2B2Q4G0G5 96 aa3.1□□□□□ -1.91
VPS41-212ENST00000482217 NHLRC3Q5JS37 347 aa3.1□□□□□ -1.91
VPS41-212ENST00000482217 MARCH3Q86UD3 253 aa3.1□□□□□ -1.91
VPS41-212ENST00000482217 H1FOOQ8IZA3 346 aaPredicted RBP3.1□□□□□ -1.91
VPS41-212ENST00000482217 SLC25A45Q8N413 288 aa3.1□□□□□ -1.91
VPS41-212ENST00000482217 OR2G3Q8NGZ4 309 aa3.1□□□□□ -1.91
VPS41-212ENST00000482217 GEMIN6Q8WXD5 167 aaKnown RBP3.1□□□□□ -1.91
VPS41-212ENST00000482217 HIST1H4GQ99525 98 aa3.1□□□□□ -1.91
VPS41-212ENST00000482217 MGLLQ99685 303 aa3.1□□□□□ -1.91
VPS41-212ENST00000482217 SOSTQ9BQB4 213 aa3.1□□□□□ -1.91
VPS41-212ENST00000482217 ANAPC13Q9BS18 74 aa3.1□□□□□ -1.91
VPS41-212ENST00000482217 PRADC1Q9BSG0 188 aa3.1□□□□□ -1.91
VPS41-212ENST00000482217 PBOV1Q9GZY1 135 aa3.1□□□□□ -1.91
VPS41-212ENST00000482217 PTGES2Q9H7Z7 377 aa3.1□□□□□ -1.91
VPS41-212ENST00000482217 CXorf21Q9HAI6 301 aa3.1□□□□□ -1.91
VPS41-212ENST00000482217 TAF9BQ9HBM6 251 aa3.1□□□□□ -1.91
VPS41-212ENST00000482217 UBQLN4Q9NRR5 601 aa3.1□□□□□ -1.91
VPS41-212ENST00000482217 OR5AC2Q9NZP5 309 aa3.1□□□□□ -1.91
VPS41-212ENST00000482217 ZNF629Q9UEG4 869 aaPredicted RBP3.1□□□□□ -1.91
VPS41-212ENST00000482217 RARRES3Q9UL19 164 aa3.1□□□□□ -1.91
VPS41-212ENST00000482217 SNX12Q9UMY4 172 aa3.1□□□□□ -1.91
VPS41-212ENST00000482217 AMMECR1Q9Y4X0 333 aaPredicted RBP3.1□□□□□ -1.91
VPS41-212ENST00000482217 NEUROG3Q9Y4Z2 214 aa3.1□□□□□ -1.91
VPS41-212ENST00000482217 PCYT1BQ9Y5K3 369 aaPredicted RBP3.1□□□□□ -1.91
VPS41-212ENST00000482217 MYH9P35579 1960 aaKnown RBP3.1□□□□□ -1.91
VPS41-212ENST00000482217 KDM5AP29375 1690 aaKnown RBP3.1□□□□□ -1.91
VPS41-212ENST00000482217 CEP162Q5TB80 1403 aa3.1□□□□□ -1.91
VPS41-212ENST00000482217 ARHGAP35Q9NRY4 1499 aa3.09□□□□□ -1.91
VPS41-212ENST00000482217 FER1L6Q2WGJ9 1857 aa3.09□□□□□ -1.91
VPS41-212ENST00000482217 NUP210LQ5VU65 1888 aa3.09□□□□□ -1.91
VPS41-212ENST00000482217 LOXHD1Q8IVV2 1947 aa3.09□□□□□ -1.91
VPS41-212ENST00000482217 SYNJ1O43426 1573 aa3.09□□□□□ -1.91
VPS41-212ENST00000482217 ZNF638Q14966 1978 aaKnown RBP3.09□□□□□ -1.91
VPS41-212ENST00000482217 FANCMQ8IYD8 2048 aa3.09□□□□□ -1.91
VPS41-212ENST00000482217 IGHV1OR15-1A0A075B7D0 117 aa3.09□□□□□ -1.91
VPS41-212ENST00000482217 A0A087WW49 117 aa3.09□□□□□ -1.91
VPS41-212ENST00000482217 IGHV6-1A0A0B4J1U7 121 aa3.09□□□□□ -1.91
VPS41-212ENST00000482217 TRAV38-1A0A0B4J264 116 aa3.09□□□□□ -1.91
VPS41-212ENST00000482217 IGHV1-69DA0A0B4J2H0 117 aa3.09□□□□□ -1.91
VPS41-212ENST00000482217 CIB4A0PJX0 185 aa3.09□□□□□ -1.91
VPS41-212ENST00000482217 TMEM218A2RU14 115 aa3.09□□□□□ -1.91
VPS41-212ENST00000482217 LINC00862A6NCI5 91 aa3.09□□□□□ -1.91
VPS41-212ENST00000482217 LY6LH3BQJ8 138 aa3.09□□□□□ -1.91
VPS41-212ENST00000482217 UPK1AO00322 258 aa3.09□□□□□ -1.91
VPS41-212ENST00000482217 OVOL1O14753 267 aa3.09□□□□□ -1.91
VPS41-212ENST00000482217 MYL12BO14950 172 aa3.09□□□□□ -1.91
VPS41-212ENST00000482217 PSPHP1O15172 72 aa3.09□□□□□ -1.91
VPS41-212ENST00000482217 LINC01565O15544 149 aa3.09□□□□□ -1.91
VPS41-212ENST00000482217 MPC2O95563 127 aa3.09□□□□□ -1.91
VPS41-212ENST00000482217 MT-ND4LP03901 98 aa3.09□□□□□ -1.91
VPS41-212ENST00000482217 INAFM2P0DMQ5 153 aa3.09□□□□□ -1.91
VPS41-212ENST00000482217 FKBP2P26885 142 aaKnown RBP3.09□□□□□ -1.91
VPS41-212ENST00000482217 PSMB2P49721 201 aa3.09□□□□□ -1.91
VPS41-212ENST00000482217 MP68P56378 58 aa3.09□□□□□ -1.91
VPS41-212ENST00000482217 GNB1P62873 340 aa3.09□□□□□ -1.91
VPS41-212ENST00000482217 HERVK_113P63121 156 aa3.09□□□□□ -1.91
VPS41-212ENST00000482217 CAV1Q03135 178 aa3.09□□□□□ -1.91
VPS41-212ENST00000482217 KIAA0087Q14695 138 aa3.09□□□□□ -1.91
VPS41-212ENST00000482217 CCL15Q16663 113 aa3.09□□□□□ -1.91
VPS41-212ENST00000482217 ZNF404Q494X3 552 aa3.09□□□□□ -1.91
VPS41-212ENST00000482217 HSD17B12Q53GQ0 312 aa3.09□□□□□ -1.91
VPS41-212ENST00000482217 Q6ZTC4 211 aa3.09□□□□□ -1.91
VPS41-212ENST00000482217 RFLNAQ6ZTI6 216 aa3.09□□□□□ -1.91
VPS41-212ENST00000482217 NOTCH2NLQ7Z3S9 236 aa3.09□□□□□ -1.91
VPS41-212ENST00000482217 LHFPL1Q86WI0 220 aa3.09□□□□□ -1.91
VPS41-212ENST00000482217 CTAGE3PQ8IX95 158 aa3.09□□□□□ -1.91
VPS41-212ENST00000482217 TCTE3Q8IZS6 198 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms