RNA–Protein interactions for RNA: ENST00000481131.5

UPF3A-207, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 678 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-207ENST00000481131 PDZD2O15018 2839 aa3.12□□□□□ -1.91
UPF3A-207ENST00000481131 RTTNQ86VV8 2226 aa3.12□□□□□ -1.91
UPF3A-207ENST00000481131 ROS1P08922 2347 aa3.11□□□□□ -1.91
UPF3A-207ENST00000481131 PLCE1Q9P212 2302 aa3.11□□□□□ -1.91
UPF3A-207ENST00000481131 IGKV1D-43A0A0B4J1Z2 117 aa3.11□□□□□ -1.91
UPF3A-207ENST00000481131 ERICH4A6NGS2 130 aa3.11□□□□□ -1.91
UPF3A-207ENST00000481131 EFCAB9A8MZ26 197 aa3.11□□□□□ -1.91
UPF3A-207ENST00000481131 TNFRSF11BO00300 401 aa3.11□□□□□ -1.91
UPF3A-207ENST00000481131 GPR171O14626 319 aa3.11□□□□□ -1.91
UPF3A-207ENST00000481131 OR2T1O43869 369 aa3.11□□□□□ -1.91
UPF3A-207ENST00000481131 MRPL33O75394 65 aaKnown RBP3.11□□□□□ -1.91
UPF3A-207ENST00000481131 ZNF324O75467 553 aaPredicted RBP3.11□□□□□ -1.91
UPF3A-207ENST00000481131 ATP5HO75947 161 aa3.11□□□□□ -1.91
UPF3A-207ENST00000481131 SOX14O95416 240 aa3.11□□□□□ -1.91
UPF3A-207ENST00000481131 PRB2P02812 416 aaPredicted RBP3.11□□□□□ -1.91
UPF3A-207ENST00000481131 TSPAN19P0C672 248 aa3.11□□□□□ -1.91
UPF3A-207ENST00000481131 FKBP2P26885 142 aaKnown RBP3.11□□□□□ -1.91
UPF3A-207ENST00000481131 LOXP28300 417 aaPredicted RBP3.11□□□□□ -1.91
UPF3A-207ENST00000481131 SSTR5P35346 364 aa3.11□□□□□ -1.91
UPF3A-207ENST00000481131 UGT2B10P36537 528 aa3.11□□□□□ -1.91
UPF3A-207ENST00000481131 UBE2NP61088 152 aaKnown RBP3.11□□□□□ -1.91
UPF3A-207ENST00000481131 C1DQ13901 141 aaKnown RBP3.11□□□□□ -1.91
UPF3A-207ENST00000481131 DGCR6Q14129 220 aa3.11□□□□□ -1.91
UPF3A-207ENST00000481131 ZNF266Q14584 549 aa3.11□□□□□ -1.91
UPF3A-207ENST00000481131 STK11Q15831 433 aa3.11□□□□□ -1.91
UPF3A-207ENST00000481131 MESTQ5EB52 335 aa3.11□□□□□ -1.91
UPF3A-207ENST00000481131 BEX5Q5H9J7 111 aa3.11□□□□□ -1.91
UPF3A-207ENST00000481131 GCSAMLQ5JQS6 135 aa3.11□□□□□ -1.91
UPF3A-207ENST00000481131 PLCXD3Q63HM9 321 aa3.11□□□□□ -1.91
UPF3A-207ENST00000481131 OR2T5Q6IEZ7 315 aa3.11□□□□□ -1.91
UPF3A-207ENST00000481131 C5orf46Q6UWT4 87 aa3.11□□□□□ -1.91
UPF3A-207ENST00000481131 Q6ZT83 130 aa3.11□□□□□ -1.91
UPF3A-207ENST00000481131 SLC35D2Q76EJ3 337 aa3.11□□□□□ -1.91
UPF3A-207ENST00000481131 BHLHA15Q7RTS1 189 aaPredicted RBP3.11□□□□□ -1.91
UPF3A-207ENST00000481131 WDR86Q86TI4 376 aa3.11□□□□□ -1.91
UPF3A-207ENST00000481131 OR8D4Q8NGM9 314 aa3.11□□□□□ -1.91
UPF3A-207ENST00000481131 OR2T29Q8NH02 315 aa3.11□□□□□ -1.91
UPF3A-207ENST00000481131 OR51F2Q8NH61 342 aa3.11□□□□□ -1.91
UPF3A-207ENST00000481131 PYDC1Q8WXC3 89 aa3.11□□□□□ -1.91
UPF3A-207ENST00000481131 RPEQ96AT9 228 aa3.11□□□□□ -1.91
UPF3A-207ENST00000481131 S100PBPQ96BU1 408 aa3.11□□□□□ -1.91
UPF3A-207ENST00000481131 TSPAN32Q96QS1 320 aa3.11□□□□□ -1.91
UPF3A-207ENST00000481131 TIMM17AQ99595 171 aa3.11□□□□□ -1.91
UPF3A-207ENST00000481131 NIPSNAP1Q9BPW8 284 aa3.11□□□□□ -1.91
UPF3A-207ENST00000481131 MED18Q9BUE0 208 aa3.11□□□□□ -1.91
UPF3A-207ENST00000481131 CHID1Q9BWS9 393 aa3.11□□□□□ -1.91
UPF3A-207ENST00000481131 C1QTNF6Q9BXI9 259 aa3.11□□□□□ -1.91
UPF3A-207ENST00000481131 PLA2G12AQ9BZM1 189 aa3.11□□□□□ -1.91
UPF3A-207ENST00000481131 SLC19A3Q9BZV2 496 aa3.11□□□□□ -1.91
UPF3A-207ENST00000481131 WFDC1Q9HC57 220 aa3.11□□□□□ -1.91
UPF3A-207ENST00000481131 RPRD1BQ9NQG5 326 aaKnown RBP3.11□□□□□ -1.91
UPF3A-207ENST00000481131 INIPQ9NRY2 104 aa3.11□□□□□ -1.91
UPF3A-207ENST00000481131 ZNF229Q9UJW7 825 aa3.11□□□□□ -1.91
UPF3A-207ENST00000481131 SIGLEC7Q9Y286 467 aa3.11□□□□□ -1.91
UPF3A-207ENST00000481131 RHBDD3Q9Y3P4 386 aa3.11□□□□□ -1.91
UPF3A-207ENST00000481131 SAMHD1Q9Y3Z3 626 aaKnown RBP3.11□□□□□ -1.91
UPF3A-207ENST00000481131 FAM32AQ9Y421 112 aaKnown RBP3.11□□□□□ -1.91
UPF3A-207ENST00000481131 YTHDF2Q9Y5A9 579 aaKnown RBP3.11□□□□□ -1.91
UPF3A-207ENST00000481131 CSMD1Q96PZ7 3565 aa3.11□□□□□ -1.91
UPF3A-207ENST00000481131 AKAP9Q99996 3911 aa3.11□□□□□ -1.91
UPF3A-207ENST00000481131 ARFGEF3Q5TH69 2177 aa3.11□□□□□ -1.91
UPF3A-207ENST00000481131 A0A0U1RQV1 116 aa3.1□□□□□ -1.91
UPF3A-207ENST00000481131 A0A1W2PRG6 482 aa3.1□□□□□ -1.91
UPF3A-207ENST00000481131 DEFB108AA8MXU0 73 aa3.1□□□□□ -1.91
UPF3A-207ENST00000481131 M0R129 80 aa3.1□□□□□ -1.91
UPF3A-207ENST00000481131 ZNF207O43670 478 aaKnown RBP3.1□□□□□ -1.91
UPF3A-207ENST00000481131 VAMP5O95183 116 aa3.1□□□□□ -1.91
UPF3A-207ENST00000481131 IGF2P01344 180 aa3.1□□□□□ -1.91
UPF3A-207ENST00000481131 PGA4P0DJD7 388 aa3.1□□□□□ -1.91
UPF3A-207ENST00000481131 PGA3P0DJD8 388 aa3.1□□□□□ -1.91
UPF3A-207ENST00000481131 PGA5P0DJD9 388 aa3.1□□□□□ -1.91
UPF3A-207ENST00000481131 USF1P22415 310 aaPredicted RBP3.1□□□□□ -1.91
UPF3A-207ENST00000481131 IL32P24001 234 aa3.1□□□□□ -1.91
UPF3A-207ENST00000481131 KIR3DL2P43630 455 aa3.1□□□□□ -1.91
UPF3A-207ENST00000481131 ZNF83P51522 516 aa3.1□□□□□ -1.91
UPF3A-207ENST00000481131 ZNF121P58317 390 aaPredicted RBP3.1□□□□□ -1.91
UPF3A-207ENST00000481131 RPS23P62266 143 aaKnown RBP3.1□□□□□ -1.91
UPF3A-207ENST00000481131 RAB11AP62491 216 aa3.1□□□□□ -1.91
UPF3A-207ENST00000481131 RAB11BQ15907 218 aa3.1□□□□□ -1.91
UPF3A-207ENST00000481131 GABRA6Q16445 453 aa3.1□□□□□ -1.91
UPF3A-207ENST00000481131 RPEL1Q2QD12 228 aa3.1□□□□□ -1.91
UPF3A-207ENST00000481131 CEACAM16Q2WEN9 425 aa3.1□□□□□ -1.91
UPF3A-207ENST00000481131 CHRFAM7AQ494W8 412 aa3.1□□□□□ -1.91
UPF3A-207ENST00000481131 CLEC12AQ5QGZ9 265 aa3.1□□□□□ -1.91
UPF3A-207ENST00000481131 FBXW9Q5XUX1 488 aa3.1□□□□□ -1.91
UPF3A-207ENST00000481131 C20orf196Q8IYI0 205 aa3.1□□□□□ -1.91
UPF3A-207ENST00000481131 WDR31Q8NA23 367 aa3.1□□□□□ -1.91
UPF3A-207ENST00000481131 OR6Q1Q8NGQ2 317 aa3.1□□□□□ -1.91
UPF3A-207ENST00000481131 OR6N1Q8NGY5 312 aa3.1□□□□□ -1.91
UPF3A-207ENST00000481131 UBALD1Q8TB05 177 aa3.1□□□□□ -1.91
UPF3A-207ENST00000481131 Q96M85 177 aa3.1□□□□□ -1.91
UPF3A-207ENST00000481131 NDFIP1Q9BT67 221 aa3.1□□□□□ -1.91
UPF3A-207ENST00000481131 ULBP2Q9BZM5 246 aa3.1□□□□□ -1.91
UPF3A-207ENST00000481131 OR52D1Q9H346 318 aa3.1□□□□□ -1.91
UPF3A-207ENST00000481131 TXNIPQ9H3M7 391 aa3.1□□□□□ -1.91
UPF3A-207ENST00000481131 REEP1Q9H902 201 aa3.1□□□□□ -1.91
UPF3A-207ENST00000481131 HMG20AQ9NP66 347 aa3.1□□□□□ -1.91
UPF3A-207ENST00000481131 ARMC1Q9NVT9 282 aa3.1□□□□□ -1.91
UPF3A-207ENST00000481131 TET2Q6N021 2002 aaPredicted RBP3.1□□□□□ -1.91
UPF3A-207ENST00000481131 SPG11Q96JI7 2443 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms