RNA–Protein interactions for RNA: ENST00000481004.1

LINC02040-201, Transcript of long intergenic non-protein coding RNA 2040, humanhuman

TSL 5 BASIC

Gene LINC02040, Length 556 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02040-201ENST00000481004 CD200R1LQ6Q8B3 271 aa4.28□□□□□ -1.72
LINC02040-201ENST00000481004 ZNF554Q86TJ5 538 aa4.28□□□□□ -1.72
LINC02040-201ENST00000481004 FOXRED2Q8IWF2 684 aa4.28□□□□□ -1.72
LINC02040-201ENST00000481004 ZNF491Q8N8L2 437 aa4.28□□□□□ -1.72
LINC02040-201ENST00000481004 ZNF383Q8NA42 475 aa4.28□□□□□ -1.72
LINC02040-201ENST00000481004 MINDY2Q8NBR6 621 aa4.28□□□□□ -1.72
LINC02040-201ENST00000481004 KCNG3Q8TAE7 436 aa4.28□□□□□ -1.72
LINC02040-201ENST00000481004 SETD6Q8TBK2 473 aa4.28□□□□□ -1.72
LINC02040-201ENST00000481004 MAFIPQ8WZ33 124 aa4.28□□□□□ -1.72
LINC02040-201ENST00000481004 FAM3DQ96BQ1 224 aa4.28□□□□□ -1.72
LINC02040-201ENST00000481004 GALMQ96C23 342 aa4.28□□□□□ -1.72
LINC02040-201ENST00000481004 NEDD4LQ96PU5 975 aa4.28□□□□□ -1.72
LINC02040-201ENST00000481004 LYSTQ99698 3801 aa4.28□□□□□ -1.72
LINC02040-201ENST00000481004 RASL11BQ9BPW5 248 aa4.28□□□□□ -1.72
LINC02040-201ENST00000481004 CCDC90BQ9GZT6 254 aa4.28□□□□□ -1.72
LINC02040-201ENST00000481004 OR51J1Q9H342 316 aa4.28□□□□□ -1.72
LINC02040-201ENST00000481004 FBXL15Q9H469 300 aa4.28□□□□□ -1.72
LINC02040-201ENST00000481004 ISYNA1Q9NPH2 558 aa4.28□□□□□ -1.72
LINC02040-201ENST00000481004 ACOT13Q9NPJ3 140 aa4.28□□□□□ -1.72
LINC02040-201ENST00000481004 PARP11Q9NR21 331 aa4.28□□□□□ -1.72
LINC02040-201ENST00000481004 ZFP57Q9NU63 452 aa4.28□□□□□ -1.72
LINC02040-201ENST00000481004 NDUFB11Q9NX14 153 aa4.28□□□□□ -1.72
LINC02040-201ENST00000481004 SCN3BQ9NY72 215 aa4.28□□□□□ -1.72
LINC02040-201ENST00000481004 ZNF230Q9UIE0 474 aaPredicted RBP4.28□□□□□ -1.72
LINC02040-201ENST00000481004 ZNF580Q9UK33 172 aa4.28□□□□□ -1.72
LINC02040-201ENST00000481004 RNF150Q9ULK6 438 aa4.28□□□□□ -1.72
LINC02040-201ENST00000481004 HSF4Q9ULV5 492 aa4.28□□□□□ -1.72
LINC02040-201ENST00000481004 TNFRSF18Q9Y5U5 241 aa4.28□□□□□ -1.72
LINC02040-201ENST00000481004 DYNC2H1Q8NCM8 4307 aaKnown RBP4.27□□□□□ -1.73
LINC02040-201ENST00000481004 IFITM5A6NNB3 132 aa4.27□□□□□ -1.73
LINC02040-201ENST00000481004 MFNGO00587 321 aa4.27□□□□□ -1.73
LINC02040-201ENST00000481004 RRHO14718 337 aa4.27□□□□□ -1.73
LINC02040-201ENST00000481004 ARPC1BO15143 372 aaKnown RBP4.27□□□□□ -1.73
LINC02040-201ENST00000481004 ATP6V1G2O95670 118 aa4.27□□□□□ -1.73
LINC02040-201ENST00000481004 IGLV2-23P01705 113 aa4.27□□□□□ -1.73
LINC02040-201ENST00000481004 FCGR3AP08637 254 aa4.27□□□□□ -1.73
LINC02040-201ENST00000481004 MYCNOSP40205 109 aa4.27□□□□□ -1.73
LINC02040-201ENST00000481004 CRIP2P52943 208 aaPredicted RBP4.27□□□□□ -1.73
LINC02040-201ENST00000481004 DEFA5Q01523 94 aa4.27□□□□□ -1.73
LINC02040-201ENST00000481004 PJVKQ0ZLH3 352 aa4.27□□□□□ -1.73
LINC02040-201ENST00000481004 KIR2DS1Q14954 304 aa4.27□□□□□ -1.73
LINC02040-201ENST00000481004 RAB11BQ15907 218 aa4.27□□□□□ -1.73
LINC02040-201ENST00000481004 IGSF11Q5DX21 431 aa4.27□□□□□ -1.73
LINC02040-201ENST00000481004 C22orf42Q6IC83 251 aa4.27□□□□□ -1.73
LINC02040-201ENST00000481004 COMMD1Q8N668 190 aa4.27□□□□□ -1.73
LINC02040-201ENST00000481004 OR2AK2Q8NG84 335 aa4.27□□□□□ -1.73
LINC02040-201ENST00000481004 OR8H1Q8NGG4 311 aa4.27□□□□□ -1.73
LINC02040-201ENST00000481004 C4orf3Q8WVX3 66 aa4.27□□□□□ -1.73
LINC02040-201ENST00000481004 THRSPQ92748 146 aa4.27□□□□□ -1.73
LINC02040-201ENST00000481004 PTX4Q96A99 478 aa4.27□□□□□ -1.73
LINC02040-201ENST00000481004 OR5B12Q96R08 314 aa4.27□□□□□ -1.73
LINC02040-201ENST00000481004 FAM103A1Q9BTL3 118 aaKnown RBP4.27□□□□□ -1.73
LINC02040-201ENST00000481004 VCXQ9H320 206 aa4.27□□□□□ -1.73
LINC02040-201ENST00000481004 RNF167Q9H6Y7 350 aa4.27□□□□□ -1.73
LINC02040-201ENST00000481004 PLGRKTQ9HBL7 147 aa4.27□□□□□ -1.73
LINC02040-201ENST00000481004 CHMP1AQ9HD42 196 aaPredicted RBP4.27□□□□□ -1.73
LINC02040-201ENST00000481004 C12orf4Q9NQ89 552 aa4.27□□□□□ -1.73
LINC02040-201ENST00000481004 PLEKHJ1Q9NW61 149 aa4.27□□□□□ -1.73
LINC02040-201ENST00000481004 KCNIP1Q9NZI2 227 aa4.27□□□□□ -1.73
LINC02040-201ENST00000481004 TPRKBQ9Y3C4 175 aa4.27□□□□□ -1.73
LINC02040-201ENST00000481004 LSM4Q9Y4Z0 139 aaKnown RBP4.27□□□□□ -1.73
LINC02040-201ENST00000481004 V9GY05 133 aa4.27□□□□□ -1.73
LINC02040-201ENST00000481004 STARD9Q9P2P6 4700 aa4.26□□□□□ -1.73
LINC02040-201ENST00000481004 TRAV1-2A0A0B4J238 106 aa4.26□□□□□ -1.73
LINC02040-201ENST00000481004 TRAV41A0A0B4J266 112 aa4.26□□□□□ -1.73
LINC02040-201ENST00000481004 TRDV1A0A1B0GX56 115 aa4.26□□□□□ -1.73
LINC02040-201ENST00000481004 SRRM4A7MD48 611 aaKnown RBP4.26□□□□□ -1.73
LINC02040-201ENST00000481004 TRDCB7Z8K6 153 aa4.26□□□□□ -1.73
LINC02040-201ENST00000481004 ITGB1BP1O14713 200 aa4.26□□□□□ -1.73
LINC02040-201ENST00000481004 RAB29O14966 203 aa4.26□□□□□ -1.73
LINC02040-201ENST00000481004 DENRO43583 198 aaKnown RBP4.26□□□□□ -1.73
LINC02040-201ENST00000481004 SSX5O60225 188 aa4.26□□□□□ -1.73
LINC02040-201ENST00000481004 CRYGBP07316 175 aa4.26□□□□□ -1.73
LINC02040-201ENST00000481004 NHLRC4P0CG21 123 aaPredicted RBP4.26□□□□□ -1.73
LINC02040-201ENST00000481004 GSTT2P0CG29 244 aa4.26□□□□□ -1.73
LINC02040-201ENST00000481004 GSTT2BP0CG30 244 aa4.26□□□□□ -1.73
LINC02040-201ENST00000481004 GNB3P16520 340 aa4.26□□□□□ -1.73
LINC02040-201ENST00000481004 BTF3P20290 206 aaKnown RBP4.26□□□□□ -1.73
LINC02040-201ENST00000481004 VDAC1P21796 283 aa4.26□□□□□ -1.73
LINC02040-201ENST00000481004 CEACAM6P40199 344 aa4.26□□□□□ -1.73
LINC02040-201ENST00000481004 RAB25P57735 213 aa4.26□□□□□ -1.73
LINC02040-201ENST00000481004 SLC35B1P78383 322 aa4.26□□□□□ -1.73
LINC02040-201ENST00000481004 CX3CL1P78423 397 aa4.26□□□□□ -1.73
LINC02040-201ENST00000481004 RUNX1Q01196 453 aa4.26□□□□□ -1.73
LINC02040-201ENST00000481004 PSG5Q15238 335 aa4.26□□□□□ -1.73
LINC02040-201ENST00000481004 ECSCRQ19T08 205 aa4.26□□□□□ -1.73
LINC02040-201ENST00000481004 RNASE12Q5GAN4 147 aaKnown RBP4.26□□□□□ -1.73
LINC02040-201ENST00000481004 CXorf66Q5JRM2 361 aaPredicted RBP4.26□□□□□ -1.73
LINC02040-201ENST00000481004 UBE2UQ5VVX9 321 aa4.26□□□□□ -1.73
LINC02040-201ENST00000481004 LIN54Q6MZP7 749 aa4.26□□□□□ -1.73
LINC02040-201ENST00000481004 FAM71F2Q6NXP2 309 aa4.26□□□□□ -1.73
LINC02040-201ENST00000481004 ZNF66Q6ZN08 573 aa4.26□□□□□ -1.73
LINC02040-201ENST00000481004 MOB1BQ7L9L4 216 aa4.26□□□□□ -1.73
LINC02040-201ENST00000481004 ZNF367Q7RTV3 350 aa4.26□□□□□ -1.73
LINC02040-201ENST00000481004 OR11H1Q8NG94 326 aa4.26□□□□□ -1.73
LINC02040-201ENST00000481004 OR8U1Q8NH10 309 aa4.26□□□□□ -1.73
LINC02040-201ENST00000481004 CLCC1Q96S66 551 aa4.26□□□□□ -1.73
LINC02040-201ENST00000481004 CABLES2Q9BTV7 478 aa4.26□□□□□ -1.73
LINC02040-201ENST00000481004 TOLLIPQ9H0E2 274 aa4.26□□□□□ -1.73
LINC02040-201ENST00000481004 RDH8Q9NYR8 311 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms