RNA–Protein interactions for RNA: ENST00000480562.3

ABCF3-214, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 1 (best)

Gene ABCF3, Length 1,182 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-214ENST00000480562 TINAGL1Q9GZM7 467 aaPredicted RBP14.39□□□□□ -0.11
ABCF3-214ENST00000480562 COA4Q9NYJ1 87 aa14.39□□□□□ -0.11
ABCF3-214ENST00000480562 RBM7Q9Y580 266 aaKnown RBP14.39□□□□□ -0.11
ABCF3-214ENST00000480562 A0A0B4J203 849 aa14.38□□□□□ -0.11
ABCF3-214ENST00000480562 SHISA3A0PJX4 238 aa14.38□□□□□ -0.11
ABCF3-214ENST00000480562 RAB27BO00194 218 aa14.38□□□□□ -0.11
ABCF3-214ENST00000480562 MFNGO00587 321 aa14.38□□□□□ -0.11
ABCF3-214ENST00000480562 RANBP1P43487 201 aa14.38□□□□□ -0.11
ABCF3-214ENST00000480562 CBX3Q13185 183 aa14.38□□□□□ -0.11
ABCF3-214ENST00000480562 SSX1Q16384 188 aa14.38□□□□□ -0.11
ABCF3-214ENST00000480562 RTL8BQ17RB0 113 aa14.38□□□□□ -0.11
ABCF3-214ENST00000480562 OR9G4Q8NGQ1 327 aa14.38□□□□□ -0.11
ABCF3-214ENST00000480562 TMEM68Q96MH6 324 aa14.38□□□□□ -0.11
ABCF3-214ENST00000480562 PHB2Q99623 299 aa14.38□□□□□ -0.11
ABCF3-214ENST00000480562 C19orf73Q9NVV2 129 aa14.38□□□□□ -0.11
ABCF3-214ENST00000480562 GAR1Q9NY12 217 aaKnown RBP14.38□□□□□ -0.11
ABCF3-214ENST00000480562 DNAH1Q9P2D7 4330 aa14.37□□□□□ -0.11
ABCF3-214ENST00000480562 IGKV1D-8A0A087WSZ0 117 aa14.37□□□□□ -0.11
ABCF3-214ENST00000480562 MSGN1A6NI15 193 aa14.37□□□□□ -0.11
ABCF3-214ENST00000480562 RBMXL2O75526 392 aaKnown RBP14.37□□□□□ -0.11
ABCF3-214ENST00000480562 HIST1H1DP16402 221 aaKnown RBP14.37□□□□□ -0.11
ABCF3-214ENST00000480562 GADD45AP24522 165 aa14.37□□□□□ -0.11
ABCF3-214ENST00000480562 DYRK1AQ13627 763 aa14.37□□□□□ -0.11
ABCF3-214ENST00000480562 ZNF343Q6P1L6 599 aa14.37□□□□□ -0.11
ABCF3-214ENST00000480562 SGPP2Q8IWX5 399 aa14.37□□□□□ -0.11
ABCF3-214ENST00000480562 CITED4Q96RK1 184 aa14.37□□□□□ -0.11
ABCF3-214ENST00000480562 GINS4Q9BRT9 223 aa14.37□□□□□ -0.11
ABCF3-214ENST00000480562 PALMDQ9NP74 551 aa14.37□□□□□ -0.11
ABCF3-214ENST00000480562 PEF1Q9UBV8 284 aaKnown RBP14.37□□□□□ -0.11
ABCF3-214ENST00000480562 IFITM5A6NNB3 132 aa14.36□□□□□ -0.11
ABCF3-214ENST00000480562 PDCD5O14737 125 aa14.36□□□□□ -0.11
ABCF3-214ENST00000480562 BRI3O95415 125 aa14.36□□□□□ -0.11
ABCF3-214ENST00000480562 CRYZL1O95825 349 aa14.36□□□□□ -0.11
ABCF3-214ENST00000480562 AADACP22760 399 aa14.36□□□□□ -0.11
ABCF3-214ENST00000480562 TAGLNQ01995 201 aaKnown RBP14.36□□□□□ -0.11
ABCF3-214ENST00000480562 ARFRP1Q13795 201 aa14.36□□□□□ -0.11
ABCF3-214ENST00000480562 ZFAND6Q6FIF0 208 aa14.36□□□□□ -0.11
ABCF3-214ENST00000480562 IDO2Q6ZQW0 420 aa14.36□□□□□ -0.11
ABCF3-214ENST00000480562 STARD9Q9P2P6 4700 aa14.35□□□□□ -0.11
ABCF3-214ENST00000480562 TRAV1-2A0A0B4J238 106 aa14.35□□□□□ -0.11
ABCF3-214ENST00000480562 LINC00473A8K010 186 aa14.35□□□□□ -0.11
ABCF3-214ENST00000480562 A8MZ25 164 aa14.35□□□□□ -0.11
ABCF3-214ENST00000480562 J3QRK9 145 aa14.35□□□□□ -0.11
ABCF3-214ENST00000480562 DIRAS3O95661 229 aa14.35□□□□□ -0.11
ABCF3-214ENST00000480562 RRASP10301 218 aa14.35□□□□□ -0.11
ABCF3-214ENST00000480562 RAB6AP20340 208 aa14.35□□□□□ -0.11
ABCF3-214ENST00000480562 DUTP33316 252 aaKnown RBP14.35□□□□□ -0.11
ABCF3-214ENST00000480562 TALDO1P37837 337 aa14.35□□□□□ -0.11
ABCF3-214ENST00000480562 TNXAQ16473 311 aa14.35□□□□□ -0.11
ABCF3-214ENST00000480562 PRSS8Q16651 343 aa14.35□□□□□ -0.11
ABCF3-214ENST00000480562 VMA21Q3ZAQ7 101 aa14.35□□□□□ -0.11
ABCF3-214ENST00000480562 ZNF367Q7RTV3 350 aa14.35□□□□□ -0.11
ABCF3-214ENST00000480562 H1FOOQ8IZA3 346 aaPredicted RBP14.35□□□□□ -0.11
ABCF3-214ENST00000480562 TEX45Q8NA69 505 aa14.35□□□□□ -0.11
ABCF3-214ENST00000480562 ADAD2Q8NCV1 583 aaKnown RBP14.35□□□□□ -0.11
ABCF3-214ENST00000480562 DDB2Q92466 427 aa14.35□□□□□ -0.11
ABCF3-214ENST00000480562 USMG5Q96IX5 58 aa14.35□□□□□ -0.11
ABCF3-214ENST00000480562 ELF5Q9UKW6 265 aaPredicted RBP14.35□□□□□ -0.11
ABCF3-214ENST00000480562 TNCP24821 2201 aa14.34□□□□□ -0.11
ABCF3-214ENST00000480562 H0Y980 276 aa14.34□□□□□ -0.11
ABCF3-214ENST00000480562 PRH1P02810 166 aa14.34□□□□□ -0.11
ABCF3-214ENST00000480562 CSN3P07498 182 aa14.34□□□□□ -0.11
ABCF3-214ENST00000480562 OR9G9P0C7N8 305 aa14.34□□□□□ -0.11
ABCF3-214ENST00000480562 UBE2KP61086 200 aa14.34□□□□□ -0.11
ABCF3-214ENST00000480562 TBCEQ15813 527 aaPredicted RBP14.34□□□□□ -0.11
ABCF3-214ENST00000480562 SRSF12Q8WXF0 261 aaKnown RBP14.34□□□□□ -0.11
ABCF3-214ENST00000480562 ACOT12Q8WYK0 555 aa14.34□□□□□ -0.11
ABCF3-214ENST00000480562 ADTRPQ96IZ2 230 aa14.34□□□□□ -0.11
ABCF3-214ENST00000480562 SMIM30A4D0T7 59 aa14.33□□□□□ -0.12
ABCF3-214ENST00000480562 MPPED1O15442 326 aa14.33□□□□□ -0.12
ABCF3-214ENST00000480562 RAB3BP20337 219 aa14.33□□□□□ -0.12
ABCF3-214ENST00000480562 MYL9P24844 172 aa14.33□□□□□ -0.12
ABCF3-214ENST00000480562 TATDN3Q17R31 274 aa14.33□□□□□ -0.12
ABCF3-214ENST00000480562 RPEL1Q2QD12 228 aa14.33□□□□□ -0.12
ABCF3-214ENST00000480562 CNBD2Q96M20 576 aa14.33□□□□□ -0.12
ABCF3-214ENST00000480562 ATG5Q9H1Y0 275 aa14.33□□□□□ -0.12
ABCF3-214ENST00000480562 TRDV1A0A1B0GX56 115 aa14.32□□□□□ -0.12
ABCF3-214ENST00000480562 IZUMO1RA6ND01 250 aa14.32□□□□□ -0.12
ABCF3-214ENST00000480562 METTL21EPA6NDL7 271 aa14.32□□□□□ -0.12
ABCF3-214ENST00000480562 RHOGP84095 191 aa14.32□□□□□ -0.12
ABCF3-214ENST00000480562 HAGHQ16775 308 aa14.32□□□□□ -0.12
ABCF3-214ENST00000480562 Q6ZS49 121 aa14.32□□□□□ -0.12
ABCF3-214ENST00000480562 NR2C2APQ86WQ0 139 aa14.32□□□□□ -0.12
ABCF3-214ENST00000480562 SNAPC3Q92966 411 aa14.32□□□□□ -0.12
ABCF3-214ENST00000480562 THAP7Q9BT49 309 aaPredicted RBP14.32□□□□□ -0.12
ABCF3-214ENST00000480562 ZNF430Q9H8G1 570 aaPredicted RBP14.32□□□□□ -0.12
ABCF3-214ENST00000480562 EDA2RQ9HAV5 297 aa14.32□□□□□ -0.12
ABCF3-214ENST00000480562 AKIP1Q9NQ31 210 aa14.32□□□□□ -0.12
ABCF3-214ENST00000480562 NDUFB11Q9NX14 153 aa14.32□□□□□ -0.12
ABCF3-214ENST00000480562 CSMD3Q7Z407 3707 aa14.31□□□□□ -0.12
ABCF3-214ENST00000480562 SAA1P0DJI8 122 aaPredicted RBP14.31□□□□□ -0.12
ABCF3-214ENST00000480562 ZNF45Q02386 682 aa14.31□□□□□ -0.12
ABCF3-214ENST00000480562 C10orf55Q5SWW7 151 aa14.31□□□□□ -0.12
ABCF3-214ENST00000480562 C22orf42Q6IC83 251 aa14.31□□□□□ -0.12
ABCF3-214ENST00000480562 LCN12Q6JVE5 192 aa14.31□□□□□ -0.12
ABCF3-214ENST00000480562 IZUMO2Q6UXV1 221 aa14.31□□□□□ -0.12
ABCF3-214ENST00000480562 OSR1Q8TAX0 266 aaPredicted RBP14.31□□□□□ -0.12
ABCF3-214ENST00000480562 ISOC1Q96CN7 298 aa14.31□□□□□ -0.12
ABCF3-214ENST00000480562 SPATA25Q9BR10 227 aa14.31□□□□□ -0.12
ABCF3-214ENST00000480562 DCUN1D5Q9BTE7 237 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms