RNA–Protein interactions for RNA: ENST00000479656.5

APTX-223, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,881 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-223ENST00000479656 HTR1DP28221 377 aa9.08□□□□□ -0.96
APTX-223ENST00000479656 FGL1Q08830 312 aa9.08□□□□□ -0.96
APTX-223ENST00000479656 PRSS57Q6UWY2 283 aa9.08□□□□□ -0.96
APTX-223ENST00000479656 LHFPL4Q7Z7J7 247 aa9.08□□□□□ -0.96
APTX-223ENST00000479656 FOXRED2Q8IWF2 684 aa9.08□□□□□ -0.96
APTX-223ENST00000479656 VKORC1L1Q8N0U8 176 aa9.08□□□□□ -0.96
APTX-223ENST00000479656 OR5AN1Q8NGI8 311 aa9.08□□□□□ -0.96
APTX-223ENST00000479656 R3HDM4Q96D70 268 aa9.08□□□□□ -0.96
APTX-223ENST00000479656 RNF126Q9BV68 326 aa9.08□□□□□ -0.96
APTX-223ENST00000479656 AMMECR1Q9Y4X0 333 aaPredicted RBP9.08□□□□□ -0.96
APTX-223ENST00000479656 FXYD6-FXYD2A0A087WZ82 144 aa9.08□□□□□ -0.96
APTX-223ENST00000479656 ODF3BA8MYP8 253 aa9.08□□□□□ -0.96
APTX-223ENST00000479656 H0YIZ8 118 aa9.08□□□□□ -0.96
APTX-223ENST00000479656 H0YJW9 148 aa9.08□□□□□ -0.96
APTX-223ENST00000479656 H7C2Y5 167 aa9.08□□□□□ -0.96
APTX-223ENST00000479656 ATG12O94817 140 aa9.08□□□□□ -0.96
APTX-223ENST00000479656 GAPDHP04406 335 aaKnown RBP9.08□□□□□ -0.96
APTX-223ENST00000479656 IGKV1-16P04430 117 aa9.08□□□□□ -0.96
APTX-223ENST00000479656 LOXL1Q08397 574 aaPredicted RBP9.08□□□□□ -0.96
APTX-223ENST00000479656 THOC7Q6I9Y2 204 aaKnown RBP9.08□□□□□ -0.96
APTX-223ENST00000479656 C11orf87Q6NUJ2 197 aa9.08□□□□□ -0.96
APTX-223ENST00000479656 SSX9Q7RTT3 188 aa9.08□□□□□ -0.96
APTX-223ENST00000479656 OR4D5Q8NGN0 318 aa9.08□□□□□ -0.96
APTX-223ENST00000479656 OR4S2Q8NH73 311 aa9.08□□□□□ -0.96
APTX-223ENST00000479656 RPEQ96AT9 228 aa9.08□□□□□ -0.96
APTX-223ENST00000479656 SPIN2AQ99865 258 aa9.08□□□□□ -0.96
APTX-223ENST00000479656 SPIN2BQ9BPZ2 258 aa9.08□□□□□ -0.96
APTX-223ENST00000479656 DPM3Q9P2X0 92 aa9.08□□□□□ -0.96
APTX-223ENST00000479656 MMP24Q9Y5R2 645 aa9.08□□□□□ -0.96
APTX-223ENST00000479656 PTPN13Q12923 2485 aa9.08□□□□□ -0.96
APTX-223ENST00000479656 GCN1Q92616 2671 aaKnown RBP9.07□□□□□ -0.96
APTX-223ENST00000479656 IGHV3-72A0A0B4J1Y9 119 aa9.07□□□□□ -0.96
APTX-223ENST00000479656 IGHV1-3A0A0C4DH29 117 aa9.07□□□□□ -0.96
APTX-223ENST00000479656 A0A1B0GU03 582 aa9.07□□□□□ -0.96
APTX-223ENST00000479656 MARCH11A6NNE9 402 aa9.07□□□□□ -0.96
APTX-223ENST00000479656 LEUTXA8MZ59 168 aa9.07□□□□□ -0.96
APTX-223ENST00000479656 NXPH3O95157 252 aa9.07□□□□□ -0.96
APTX-223ENST00000479656 APOA2P02652 100 aa9.07□□□□□ -0.96
APTX-223ENST00000479656 MBPP02686 304 aaPredicted RBP9.07□□□□□ -0.96
APTX-223ENST00000479656 PAX6P26367 422 aa9.07□□□□□ -0.96
APTX-223ENST00000479656 S100A10P60903 97 aa9.07□□□□□ -0.96
APTX-223ENST00000479656 RTL8BQ17RB0 113 aa9.07□□□□□ -0.96
APTX-223ENST00000479656 CXorf66Q5JRM2 361 aaPredicted RBP9.07□□□□□ -0.96
APTX-223ENST00000479656 H2BFWTQ7Z2G1 175 aa9.07□□□□□ -0.96
APTX-223ENST00000479656 MOB3BQ86TA1 216 aa9.07□□□□□ -0.96
APTX-223ENST00000479656 DMBX1Q8NFW5 382 aa9.07□□□□□ -0.96
APTX-223ENST00000479656 THAP6Q8TBB0 222 aa9.07□□□□□ -0.96
APTX-223ENST00000479656 C1orf159Q96HA4 380 aa9.07□□□□□ -0.96
APTX-223ENST00000479656 HIF1ANQ9NWT6 349 aa9.07□□□□□ -0.96
APTX-223ENST00000479656 CACNG5Q9UF02 275 aa9.07□□□□□ -0.96
APTX-223ENST00000479656 BOLA1Q9Y3E2 137 aa9.07□□□□□ -0.96
APTX-223ENST00000479656 LSM5Q9Y4Y9 91 aaKnown RBP9.07□□□□□ -0.96
APTX-223ENST00000479656 HILPDAQ9Y5L2 63 aa9.07□□□□□ -0.96
APTX-223ENST00000479656 CENPEQ02224 2701 aa9.07□□□□□ -0.96
APTX-223ENST00000479656 POLQO75417 2590 aa9.07□□□□□ -0.96
APTX-223ENST00000479656 NBPF19A0A087WUL8 3843 aa9.07□□□□□ -0.96
APTX-223ENST00000479656 KCNAB3O43448 404 aa9.06□□□□□ -0.96
APTX-223ENST00000479656 PITX3O75364 302 aa9.06□□□□□ -0.96
APTX-223ENST00000479656 P0C879 139 aa9.06□□□□□ -0.96
APTX-223ENST00000479656 RRASP10301 218 aa9.06□□□□□ -0.96
APTX-223ENST00000479656 SLC25A4P12235 298 aa9.06□□□□□ -0.96
APTX-223ENST00000479656 SLC25A6P12236 298 aa9.06□□□□□ -0.96
APTX-223ENST00000479656 NQO2P16083 231 aa9.06□□□□□ -0.96
APTX-223ENST00000479656 UBE2E1P51965 193 aa9.06□□□□□ -0.96
APTX-223ENST00000479656 TAGLNQ01995 201 aaKnown RBP9.06□□□□□ -0.96
APTX-223ENST00000479656 SMCO1Q147U7 214 aa9.06□□□□□ -0.96
APTX-223ENST00000479656 TPTE2P1Q5T6R2 138 aa9.06□□□□□ -0.96
APTX-223ENST00000479656 LAMTOR1Q6IAA8 161 aa9.06□□□□□ -0.96
APTX-223ENST00000479656 ZNF546Q86UE3 836 aa9.06□□□□□ -0.96
APTX-223ENST00000479656 LINC01356Q8N9X3 169 aa9.06□□□□□ -0.96
APTX-223ENST00000479656 OR1S1Q8NH92 325 aa9.06□□□□□ -0.96
APTX-223ENST00000479656 OR5AC2Q9NZP5 309 aa9.06□□□□□ -0.96
APTX-223ENST00000479656 MBD2Q9UBB5 411 aa9.06□□□□□ -0.96
APTX-223ENST00000479656 APCP25054 2843 aa9.06□□□□□ -0.96
APTX-223ENST00000479656 ANKRD17O75179 2603 aaKnown RBP9.06□□□□□ -0.96
APTX-223ENST00000479656 CENPVL3A0A0U1RRI6 287 aa9.06□□□□□ -0.96
APTX-223ENST00000479656 SRRM4A7MD48 611 aaKnown RBP9.06□□□□□ -0.96
APTX-223ENST00000479656 K7EPK0 472 aa9.06□□□□□ -0.96
APTX-223ENST00000479656 ARPC5O15511 151 aa9.06□□□□□ -0.96
APTX-223ENST00000479656 MC5RP33032 325 aa9.06□□□□□ -0.96
APTX-223ENST00000479656 CEACAM3P40198 252 aa9.06□□□□□ -0.96
APTX-223ENST00000479656 NKX2-1P43699 371 aaPredicted RBP9.06□□□□□ -0.96
APTX-223ENST00000479656 LGALS4P56470 323 aa9.06□□□□□ -0.96
APTX-223ENST00000479656 ERVK-16P61578 105 aa9.06□□□□□ -0.96
APTX-223ENST00000479656 ID3Q02535 119 aa9.06□□□□□ -0.96
APTX-223ENST00000479656 SSX2Q16385 188 aa9.06□□□□□ -0.96
APTX-223ENST00000479656 LGALSLQ3ZCW2 172 aaPredicted RBP9.06□□□□□ -0.96
APTX-223ENST00000479656 DHRS7BQ6IAN0 325 aaPredicted RBP9.06□□□□□ -0.96
APTX-223ENST00000479656 FAM71E2Q8N5Q1 922 aa9.06□□□□□ -0.96
APTX-223ENST00000479656 FLYWCH2Q96CP2 140 aaKnown RBP9.06□□□□□ -0.96
APTX-223ENST00000479656 MAGT1Q9H0U3 335 aa9.06□□□□□ -0.96
APTX-223ENST00000479656 C7orf69Q9H7B7 122 aa9.06□□□□□ -0.96
APTX-223ENST00000479656 PLSCR3Q9NRY6 295 aa9.06□□□□□ -0.96
APTX-223ENST00000479656 NSG2Q9Y328 171 aa9.06□□□□□ -0.96
APTX-223ENST00000479656 WASHC3Q9Y3C0 194 aa9.06□□□□□ -0.96
APTX-223ENST00000479656 AUP1Q9Y679 476 aa9.06□□□□□ -0.96
APTX-223ENST00000479656 TRAV20A0A0B4J274 112 aa9.05□□□□□ -0.96
APTX-223ENST00000479656 HMSDA8MTL9 139 aa9.05□□□□□ -0.96
APTX-223ENST00000479656 SHOXO15266 292 aa9.05□□□□□ -0.96
APTX-223ENST00000479656 ST8SIA3O43173 380 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms