RNA–Protein interactions for RNA: ENST00000473417.5

SNX4-204, Transcript of sorting nexin 4, humanhuman

TSL 3

Gene SNX4, Length 754 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-204ENST00000473417 LIN54Q6MZP7 749 aa14.2□□□□□ -0.14
SNX4-204ENST00000473417 DHRS11Q6UWP2 260 aa14.2□□□□□ -0.14
SNX4-204ENST00000473417 TMEM17Q86X19 198 aa14.2□□□□□ -0.14
SNX4-204ENST00000473417 FOXRED2Q8IWF2 684 aa14.2□□□□□ -0.14
SNX4-204ENST00000473417 FCAMRQ8WWV6 532 aa14.2□□□□□ -0.14
SNX4-204ENST00000473417 AURKAIP1Q9NWT8 199 aaPredicted RBP14.2□□□□□ -0.14
SNX4-204ENST00000473417 ZNF107Q9UII5 783 aaPredicted RBP14.2□□□□□ -0.14
SNX4-204ENST00000473417 COL7A1Q02388 2944 aa14.19□□□□□ -0.14
SNX4-204ENST00000473417 DPPA5A6NC42 116 aa14.19□□□□□ -0.14
SNX4-204ENST00000473417 RRHO14718 337 aa14.19□□□□□ -0.14
SNX4-204ENST00000473417 IGLL1P15814 213 aa14.19□□□□□ -0.14
SNX4-204ENST00000473417 RPL30P62888 115 aaKnown RBP14.19□□□□□ -0.14
SNX4-204ENST00000473417 DGCR2P98153 550 aa14.19□□□□□ -0.14
SNX4-204ENST00000473417 TAGLNQ01995 201 aaKnown RBP14.19□□□□□ -0.14
SNX4-204ENST00000473417 CBX3Q13185 183 aa14.19□□□□□ -0.14
SNX4-204ENST00000473417 PLGLAQ15195 96 aa14.19□□□□□ -0.14
SNX4-204ENST00000473417 PSG5Q15238 335 aa14.19□□□□□ -0.14
SNX4-204ENST00000473417 RTL8BQ17RB0 113 aa14.19□□□□□ -0.14
SNX4-204ENST00000473417 KHDC1LQ5JSQ8 128 aa14.19□□□□□ -0.14
SNX4-204ENST00000473417 FOXB2Q5VYV0 432 aa14.19□□□□□ -0.14
SNX4-204ENST00000473417 ZNF660Q6AZW8 331 aaPredicted RBP14.19□□□□□ -0.14
SNX4-204ENST00000473417 PYHIN1Q6K0P9 492 aa14.19□□□□□ -0.14
SNX4-204ENST00000473417 OR6F1Q8NGZ6 308 aa14.19□□□□□ -0.14
SNX4-204ENST00000473417 CHPT1Q8WUD6 406 aa14.19□□□□□ -0.14
SNX4-204ENST00000473417 DDB2Q92466 427 aa14.19□□□□□ -0.14
SNX4-204ENST00000473417 GPHA2Q96T91 129 aa14.19□□□□□ -0.14
SNX4-204ENST00000473417 TSNAXQ99598 290 aaKnown RBP14.19□□□□□ -0.14
SNX4-204ENST00000473417 TAS2R8Q9NYW2 309 aa14.19□□□□□ -0.14
SNX4-204ENST00000473417 MTFP1Q9UDX5 166 aa14.19□□□□□ -0.14
SNX4-204ENST00000473417 M0QYG6 137 aa14.18□□□□□ -0.14
SNX4-204ENST00000473417 TNFSF12O43508 249 aa14.18□□□□□ -0.14
SNX4-204ENST00000473417 FCGR3BO75015 233 aa14.18□□□□□ -0.14
SNX4-204ENST00000473417 RRASP10301 218 aa14.18□□□□□ -0.14
SNX4-204ENST00000473417 TSPAN5P62079 268 aa14.18□□□□□ -0.14
SNX4-204ENST00000473417 OR2B11Q5JQS5 317 aa14.18□□□□□ -0.14
SNX4-204ENST00000473417 KCTD9Q7L273 389 aa14.18□□□□□ -0.14
SNX4-204ENST00000473417 ZNF329Q86UD4 541 aa14.18□□□□□ -0.14
SNX4-204ENST00000473417 TCTEX1D2Q8WW35 142 aa14.18□□□□□ -0.14
SNX4-204ENST00000473417 DGCR14Q96DF8 476 aaKnown RBP14.18□□□□□ -0.14
SNX4-204ENST00000473417 CLCC1Q96S66 551 aa14.18□□□□□ -0.14
SNX4-204ENST00000473417 HSD17B10Q99714 261 aaKnown RBP14.18□□□□□ -0.14
SNX4-204ENST00000473417 METTL1Q9UBP6 276 aaKnown RBP14.18□□□□□ -0.14
SNX4-204ENST00000473417 FABP12A6NFH5 140 aa14.17□□□□□ -0.14
SNX4-204ENST00000473417 GABARAPH6UMI1 98 aa14.17□□□□□ -0.14
SNX4-204ENST00000473417 AP4M1O00189 453 aa14.17□□□□□ -0.14
SNX4-204ENST00000473417 FCN1O00602 326 aa14.17□□□□□ -0.14
SNX4-204ENST00000473417 SHOXO15266 292 aa14.17□□□□□ -0.14
SNX4-204ENST00000473417 CRYZL1O95825 349 aa14.17□□□□□ -0.14
SNX4-204ENST00000473417 HLA-DRB1P01911 266 aa14.17□□□□□ -0.14
SNX4-204ENST00000473417 EIF4EBP1Q13541 118 aaPredicted RBP14.17□□□□□ -0.14
SNX4-204ENST00000473417 TMEM177Q53S58 311 aa14.17□□□□□ -0.14
SNX4-204ENST00000473417 STPG2Q8N412 459 aa14.17□□□□□ -0.14
SNX4-204ENST00000473417 MFSD4AQ8N468 514 aa14.17□□□□□ -0.14
SNX4-204ENST00000473417 MRAPQ8TCY5 172 aa14.17□□□□□ -0.14
SNX4-204ENST00000473417 MOB3AQ96BX8 217 aa14.17□□□□□ -0.14
SNX4-204ENST00000473417 RCC1LQ96I51 464 aaKnown RBP14.17□□□□□ -0.14
SNX4-204ENST00000473417 HARBI1Q96MB7 349 aa14.17□□□□□ -0.14
SNX4-204ENST00000473417 NDUFA13Q9P0J0 144 aa14.17□□□□□ -0.14
SNX4-204ENST00000473417 PRELID3BQ9Y3B1 194 aa14.17□□□□□ -0.14
SNX4-204ENST00000473417 IGHV7-81A0A0B4J1V7 117 aa14.16□□□□□ -0.14
SNX4-204ENST00000473417 SLC25A17O43808 307 aa14.16□□□□□ -0.14
SNX4-204ENST00000473417 CD3DP04234 171 aa14.16□□□□□ -0.14
SNX4-204ENST00000473417 LGALS7P47929 136 aa14.16□□□□□ -0.14
SNX4-204ENST00000473417 MRPS10P82664 201 aaKnown RBP14.16□□□□□ -0.14
SNX4-204ENST00000473417 MSMO1Q15800 293 aa14.16□□□□□ -0.14
SNX4-204ENST00000473417 ACTBL2Q562R1 376 aa14.16□□□□□ -0.14
SNX4-204ENST00000473417 ZNF66Q6ZN08 573 aa14.16□□□□□ -0.14
SNX4-204ENST00000473417 ETV3LQ6ZN32 361 aa14.16□□□□□ -0.14
SNX4-204ENST00000473417 ZNF818PQ6ZRF7 136 aa14.16□□□□□ -0.14
SNX4-204ENST00000473417 ZBTB34Q8NCN2 500 aa14.16□□□□□ -0.14
SNX4-204ENST00000473417 TINAGL1Q9GZM7 467 aaPredicted RBP14.16□□□□□ -0.14
SNX4-204ENST00000473417 OR51J1Q9H342 316 aa14.16□□□□□ -0.14
SNX4-204ENST00000473417 TPSG1Q9NRR2 321 aa14.16□□□□□ -0.14
SNX4-204ENST00000473417 RABL2AQ9UBK7 228 aaPredicted RBP14.16□□□□□ -0.14
SNX4-204ENST00000473417 RABL2BQ9UNT1 228 aa14.16□□□□□ -0.14
SNX4-204ENST00000473417 SRRM4A7MD48 611 aaKnown RBP14.15□□□□□ -0.14
SNX4-204ENST00000473417 SPDEFO95238 335 aa14.15□□□□□ -0.14
SNX4-204ENST00000473417 IGLV2-23P01705 113 aa14.15□□□□□ -0.14
SNX4-204ENST00000473417 GNRHRP30968 328 aa14.15□□□□□ -0.14
SNX4-204ENST00000473417 S100A5P33763 92 aa14.15□□□□□ -0.14
SNX4-204ENST00000473417 RPL23AP62750 156 aaKnown RBP14.15□□□□□ -0.14
SNX4-204ENST00000473417 RNASE10Q5GAN6 216 aaKnown RBP14.15□□□□□ -0.14
SNX4-204ENST00000473417 VAX1Q5SQQ9 334 aa14.15□□□□□ -0.14
SNX4-204ENST00000473417 LINC00482Q8N8I6 264 aa14.15□□□□□ -0.14
SNX4-204ENST00000473417 SMIM4Q8WVI0 70 aa14.15□□□□□ -0.14
SNX4-204ENST00000473417 SOSTQ9BQB4 213 aa14.15□□□□□ -0.14
SNX4-204ENST00000473417 FXYD6Q9H0Q3 95 aa14.15□□□□□ -0.14
SNX4-204ENST00000473417 PARP11Q9NR21 331 aa14.15□□□□□ -0.14
SNX4-204ENST00000473417 A3GALT2U3KPV4 340 aa14.15□□□□□ -0.14
SNX4-204ENST00000473417 CTDSPLO15194 276 aa14.14□□□□□ -0.15
SNX4-204ENST00000473417 ATP6V0E1O15342 81 aa14.14□□□□□ -0.15
SNX4-204ENST00000473417 DUS4LO95620 317 aaKnown RBP14.14□□□□□ -0.15
SNX4-204ENST00000473417 IFNA6P05013 189 aa14.14□□□□□ -0.15
SNX4-204ENST00000473417 TAS2R19P59542 299 aa14.14□□□□□ -0.15
SNX4-204ENST00000473417 SLC35B1P78383 322 aa14.14□□□□□ -0.15
SNX4-204ENST00000473417 CX3CL1P78423 397 aa14.14□□□□□ -0.15
SNX4-204ENST00000473417 COMMD1Q8N668 190 aa14.14□□□□□ -0.15
SNX4-204ENST00000473417 TMEM229BQ8NBD8 167 aa14.14□□□□□ -0.15
SNX4-204ENST00000473417 WSB1Q9Y6I7 421 aa14.14□□□□□ -0.15
SNX4-204ENST00000473417 CA2P00918 260 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms