RNA–Protein interactions for RNA: ENST00000470076.1

COL7A1-208, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 651 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-208ENST00000470076 RAB6AP20340 208 aa13.38□□□□□ -0.27
COL7A1-208ENST00000470076 TBCEQ15813 527 aaPredicted RBP13.38□□□□□ -0.27
COL7A1-208ENST00000470076 SGPP2Q8IWX5 399 aa13.38□□□□□ -0.27
COL7A1-208ENST00000470076 OR9G4Q8NGQ1 327 aa13.38□□□□□ -0.27
COL7A1-208ENST00000470076 USMG5Q96IX5 58 aa13.38□□□□□ -0.27
COL7A1-208ENST00000470076 ADTRPQ96IZ2 230 aa13.38□□□□□ -0.27
COL7A1-208ENST00000470076 TM2D3Q9BRN9 247 aa13.38□□□□□ -0.27
COL7A1-208ENST00000470076 GINS4Q9BRT9 223 aa13.38□□□□□ -0.27
COL7A1-208ENST00000470076 DYNC2H1Q8NCM8 4307 aaKnown RBP13.38□□□□□ -0.27
COL7A1-208ENST00000470076 METTL21EPA6NDL7 271 aa13.37□□□□□ -0.27
COL7A1-208ENST00000470076 IFITM5A6NNB3 132 aa13.37□□□□□ -0.27
COL7A1-208ENST00000470076 RAB27BO00194 218 aa13.37□□□□□ -0.27
COL7A1-208ENST00000470076 GNB3P16520 340 aa13.37□□□□□ -0.27
COL7A1-208ENST00000470076 ZNF343Q6P1L6 599 aa13.37□□□□□ -0.27
COL7A1-208ENST00000470076 Q6ZS49 121 aa13.37□□□□□ -0.27
COL7A1-208ENST00000470076 ZNF367Q7RTV3 350 aa13.37□□□□□ -0.27
COL7A1-208ENST00000470076 C5orf30Q96GV9 206 aa13.37□□□□□ -0.27
COL7A1-208ENST00000470076 CITED4Q96RK1 184 aa13.37□□□□□ -0.27
COL7A1-208ENST00000470076 C19orf73Q9NVV2 129 aa13.37□□□□□ -0.27
COL7A1-208ENST00000470076 COA4Q9NYJ1 87 aa13.37□□□□□ -0.27
COL7A1-208ENST00000470076 PEF1Q9UBV8 284 aaKnown RBP13.37□□□□□ -0.27
COL7A1-208ENST00000470076 ZNF230Q9UIE0 474 aaPredicted RBP13.37□□□□□ -0.27
COL7A1-208ENST00000470076 A0A075B6Q4 140 aa13.36□□□□□ -0.27
COL7A1-208ENST00000470076 SRRM4A7MD48 611 aaKnown RBP13.36□□□□□ -0.27
COL7A1-208ENST00000470076 H0Y980 276 aa13.36□□□□□ -0.27
COL7A1-208ENST00000470076 LYL1P12980 280 aa13.36□□□□□ -0.27
COL7A1-208ENST00000470076 MYL9P24844 172 aa13.36□□□□□ -0.27
COL7A1-208ENST00000470076 TALDO1P37837 337 aa13.36□□□□□ -0.27
COL7A1-208ENST00000470076 OR10A3P58181 314 aa13.36□□□□□ -0.27
COL7A1-208ENST00000470076 UBE2KP61086 200 aa13.36□□□□□ -0.27
COL7A1-208ENST00000470076 ARFRP1Q13795 201 aa13.36□□□□□ -0.27
COL7A1-208ENST00000470076 ARL6IP1Q15041 203 aa13.36□□□□□ -0.27
COL7A1-208ENST00000470076 SSX1Q16384 188 aa13.36□□□□□ -0.27
COL7A1-208ENST00000470076 TATDN3Q17R31 274 aa13.36□□□□□ -0.27
COL7A1-208ENST00000470076 VMA21Q3ZAQ7 101 aa13.36□□□□□ -0.27
COL7A1-208ENST00000470076 TEX45Q8NA69 505 aa13.36□□□□□ -0.27
COL7A1-208ENST00000470076 MAFIPQ8WZ33 124 aa13.36□□□□□ -0.27
COL7A1-208ENST00000470076 DDB2Q92466 427 aa13.36□□□□□ -0.27
COL7A1-208ENST00000470076 PHB2Q99623 299 aa13.36□□□□□ -0.27
COL7A1-208ENST00000470076 VCX3BQ9H321 246 aa13.36□□□□□ -0.27
COL7A1-208ENST00000470076 BLOC1S6Q9UL45 172 aa13.36□□□□□ -0.27
COL7A1-208ENST00000470076 TENM2Q9NT68 2774 aa13.36□□□□□ -0.27
COL7A1-208ENST00000470076 SHISA3A0PJX4 238 aa13.35□□□□□ -0.27
COL7A1-208ENST00000470076 MSGN1A6NI15 193 aa13.35□□□□□ -0.27
COL7A1-208ENST00000470076 RAB3BP20337 219 aa13.35□□□□□ -0.27
COL7A1-208ENST00000470076 DUTP33316 252 aaKnown RBP13.35□□□□□ -0.27
COL7A1-208ENST00000470076 SYNJ2BPP57105 145 aa13.35□□□□□ -0.27
COL7A1-208ENST00000470076 DYRK1AQ13627 763 aa13.35□□□□□ -0.27
COL7A1-208ENST00000470076 MRGPRG-AS1Q2M3A8 158 aa13.35□□□□□ -0.27
COL7A1-208ENST00000470076 IL34Q6ZMJ4 242 aa13.35□□□□□ -0.27
COL7A1-208ENST00000470076 H1FOOQ8IZA3 346 aaPredicted RBP13.35□□□□□ -0.27
COL7A1-208ENST00000470076 OSR1Q8TAX0 266 aaPredicted RBP13.35□□□□□ -0.27
COL7A1-208ENST00000470076 PALMDQ9NP74 551 aa13.35□□□□□ -0.27
COL7A1-208ENST00000470076 NDUFB11Q9NX14 153 aa13.35□□□□□ -0.27
COL7A1-208ENST00000470076 TRDV1A0A1B0GX56 115 aa13.34□□□□□ -0.27
COL7A1-208ENST00000470076 CRYZL1O95825 349 aa13.34□□□□□ -0.27
COL7A1-208ENST00000470076 OR9G9P0C7N8 305 aa13.34□□□□□ -0.27
COL7A1-208ENST00000470076 HSPA13P48723 471 aa13.34□□□□□ -0.27
COL7A1-208ENST00000470076 TNXAQ16473 311 aa13.34□□□□□ -0.27
COL7A1-208ENST00000470076 PRSS8Q16651 343 aa13.34□□□□□ -0.27
COL7A1-208ENST00000470076 ADAD2Q8NCV1 583 aaKnown RBP13.34□□□□□ -0.27
COL7A1-208ENST00000470076 SIGLEC8Q9NYZ4 499 aa13.34□□□□□ -0.27
COL7A1-208ENST00000470076 LINC00473A8K010 186 aa13.33□□□□□ -0.28
COL7A1-208ENST00000470076 CREBL2O60519 120 aaPredicted RBP13.33□□□□□ -0.28
COL7A1-208ENST00000470076 APELAP0DMC3 54 aa13.33□□□□□ -0.28
COL7A1-208ENST00000470076 GALP22466 123 aa13.33□□□□□ -0.28
COL7A1-208ENST00000470076 DTYMKP23919 212 aa13.33□□□□□ -0.28
COL7A1-208ENST00000470076 DEFA5Q01523 94 aa13.33□□□□□ -0.28
COL7A1-208ENST00000470076 RPEL1Q2QD12 228 aa13.33□□□□□ -0.28
COL7A1-208ENST00000470076 LCN12Q6JVE5 192 aa13.33□□□□□ -0.28
COL7A1-208ENST00000470076 SRSF12Q8WXF0 261 aaKnown RBP13.33□□□□□ -0.28
COL7A1-208ENST00000470076 ACOT12Q8WYK0 555 aa13.33□□□□□ -0.28
COL7A1-208ENST00000470076 SNAPC3Q92966 411 aa13.33□□□□□ -0.28
COL7A1-208ENST00000470076 IGKV1D-8A0A087WSZ0 117 aa13.32□□□□□ -0.28
COL7A1-208ENST00000470076 A0A0B4J203 849 aa13.32□□□□□ -0.28
COL7A1-208ENST00000470076 FAM223BA6NKX1 122 aa13.32□□□□□ -0.28
COL7A1-208ENST00000470076 MPPED1O15442 326 aa13.32□□□□□ -0.28
COL7A1-208ENST00000470076 OR2A4O95047 310 aa13.32□□□□□ -0.28
COL7A1-208ENST00000470076 TRBV12-3P01733 135 aa13.32□□□□□ -0.28
COL7A1-208ENST00000470076 IDO2Q6ZQW0 420 aa13.32□□□□□ -0.28
COL7A1-208ENST00000470076 GTSCR1Q86UQ5 136 aa13.32□□□□□ -0.28
COL7A1-208ENST00000470076 FAM223AQ8IWN6 122 aa13.32□□□□□ -0.28
COL7A1-208ENST00000470076 Q8N402 240 aa13.32□□□□□ -0.28
COL7A1-208ENST00000470076 CNBD2Q96M20 576 aa13.32□□□□□ -0.28
COL7A1-208ENST00000470076 ATG5Q9H1Y0 275 aa13.32□□□□□ -0.28
COL7A1-208ENST00000470076 RBMXL2O75526 392 aaKnown RBP13.31□□□□□ -0.28
COL7A1-208ENST00000470076 ACTL6BO94805 426 aa13.31□□□□□ -0.28
COL7A1-208ENST00000470076 CSN3P07498 182 aa13.31□□□□□ -0.28
COL7A1-208ENST00000470076 CTXN2P0C2S0 81 aa13.31□□□□□ -0.28
COL7A1-208ENST00000470076 CDK10Q15131 360 aa13.31□□□□□ -0.28
COL7A1-208ENST00000470076 IZUMO2Q6UXV1 221 aa13.31□□□□□ -0.28
COL7A1-208ENST00000470076 ZNF645Q8N7E2 425 aa13.31□□□□□ -0.28
COL7A1-208ENST00000470076 ISOC1Q96CN7 298 aa13.31□□□□□ -0.28
COL7A1-208ENST00000470076 SPIN2AQ99865 258 aa13.31□□□□□ -0.28
COL7A1-208ENST00000470076 SPIN2BQ9BPZ2 258 aa13.31□□□□□ -0.28
COL7A1-208ENST00000470076 SPATA25Q9BR10 227 aa13.31□□□□□ -0.28
COL7A1-208ENST00000470076 PEMTQ9UBM1 199 aa13.31□□□□□ -0.28
COL7A1-208ENST00000470076 ADAM30Q9UKF2 790 aa13.31□□□□□ -0.28
COL7A1-208ENST00000470076 RYR2Q92736 4967 aa13.31□□□□□ -0.28
COL7A1-208ENST00000470076 CSMD3Q7Z407 3707 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms