RNA–Protein interactions for RNA: ENST00000467065.1

UBXN4-205, Transcript of UBX domain protein 4, humanhuman

TSL 5

Gene UBXN4, Length 334 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-205ENST00000467065 VAMP1P23763 118 aa5.34□□□□□ -1.55
UBXN4-205ENST00000467065 CD1BP29016 333 aa5.34□□□□□ -1.55
UBXN4-205ENST00000467065 LGALS7P47929 136 aa5.34□□□□□ -1.55
UBXN4-205ENST00000467065 REG1BP48304 166 aa5.34□□□□□ -1.55
UBXN4-205ENST00000467065 RAG2P55895 527 aa5.34□□□□□ -1.55
UBXN4-205ENST00000467065 DLX6P56179 175 aa5.34□□□□□ -1.55
UBXN4-205ENST00000467065 PIGPP57054 158 aa5.34□□□□□ -1.55
UBXN4-205ENST00000467065 SRSF4Q08170 494 aaKnown RBP5.34□□□□□ -1.55
UBXN4-205ENST00000467065 GNMTQ14749 295 aa5.34□□□□□ -1.55
UBXN4-205ENST00000467065 ZNF79Q15937 498 aa5.34□□□□□ -1.55
UBXN4-205ENST00000467065 BAK1Q16611 211 aa5.34□□□□□ -1.55
UBXN4-205ENST00000467065 AANATQ16613 207 aa5.34□□□□□ -1.55
UBXN4-205ENST00000467065 LRRC75BQ2VPJ9 315 aa5.34□□□□□ -1.55
UBXN4-205ENST00000467065 VMA21Q3ZAQ7 101 aa5.34□□□□□ -1.55
UBXN4-205ENST00000467065 PHLDA2Q53GA4 152 aa5.34□□□□□ -1.55
UBXN4-205ENST00000467065 DHRS7BQ6IAN0 325 aaPredicted RBP5.34□□□□□ -1.55
UBXN4-205ENST00000467065 SHISA2Q6UWI4 295 aa5.34□□□□□ -1.55
UBXN4-205ENST00000467065 KCTD9Q7L273 389 aa5.34□□□□□ -1.55
UBXN4-205ENST00000467065 UXS1Q8NBZ7 420 aa5.34□□□□□ -1.55
UBXN4-205ENST00000467065 SGMS2Q8NHU3 365 aa5.34□□□□□ -1.55
UBXN4-205ENST00000467065 MARCH1Q8TCQ1 289 aa5.34□□□□□ -1.55
UBXN4-205ENST00000467065 RTN4IP1Q8WWV3 396 aaPredicted RBP5.34□□□□□ -1.55
UBXN4-205ENST00000467065 ABHD14BQ96IU4 210 aa5.34□□□□□ -1.55
UBXN4-205ENST00000467065 SSX3Q99909 188 aa5.34□□□□□ -1.55
UBXN4-205ENST00000467065 RNF5Q99942 180 aa5.34□□□□□ -1.55
UBXN4-205ENST00000467065 CCL28Q9NRJ3 127 aa5.34□□□□□ -1.55
UBXN4-205ENST00000467065 SLC35D1Q9NTN3 355 aa5.34□□□□□ -1.55
UBXN4-205ENST00000467065 WASHC3Q9Y3C0 194 aa5.34□□□□□ -1.55
UBXN4-205ENST00000467065 IGKV1D-8A0A087WSZ0 117 aa5.33□□□□□ -1.56
UBXN4-205ENST00000467065 SAA2-SAA4A0A096LPE2 208 aa5.33□□□□□ -1.56
UBXN4-205ENST00000467065 IGHV1-3A0A0C4DH29 117 aa5.33□□□□□ -1.56
UBXN4-205ENST00000467065 C3orf85A0A1B0GTC6 90 aa5.33□□□□□ -1.56
UBXN4-205ENST00000467065 MPPED1O15442 326 aa5.33□□□□□ -1.56
UBXN4-205ENST00000467065 TNFSF12O43508 249 aa5.33□□□□□ -1.56
UBXN4-205ENST00000467065 GPR137BO60478 399 aa5.33□□□□□ -1.56
UBXN4-205ENST00000467065 MMP23AO75900 390 aa5.33□□□□□ -1.56
UBXN4-205ENST00000467065 CNIH1O95406 144 aa5.33□□□□□ -1.56
UBXN4-205ENST00000467065 HPRT1P00492 218 aa5.33□□□□□ -1.56
UBXN4-205ENST00000467065 CTSDP07339 412 aaPredicted RBP5.33□□□□□ -1.56
UBXN4-205ENST00000467065 SNRNP70P08621 437 aaKnown RBP5.33□□□□□ -1.56
UBXN4-205ENST00000467065 H2AFB2P0C5Z0 115 aa5.33□□□□□ -1.56
UBXN4-205ENST00000467065 SAA2P0DJI9 122 aaPredicted RBP5.33□□□□□ -1.56
UBXN4-205ENST00000467065 AKR1C2P52895 323 aa5.33□□□□□ -1.56
UBXN4-205ENST00000467065 UBE2MP61081 183 aaKnown RBP5.33□□□□□ -1.56
UBXN4-205ENST00000467065 ZNF816Q0VGE8 651 aaPredicted RBP5.33□□□□□ -1.56
UBXN4-205ENST00000467065 ASAH1Q13510 395 aa5.33□□□□□ -1.56
UBXN4-205ENST00000467065 KLF9Q13886 244 aaPredicted RBP5.33□□□□□ -1.56
UBXN4-205ENST00000467065 HNF4GQ14541 408 aa5.33□□□□□ -1.56
UBXN4-205ENST00000467065 TMEM128Q5BJH2 165 aa5.33□□□□□ -1.56
UBXN4-205ENST00000467065 THOC7Q6I9Y2 204 aaKnown RBP5.33□□□□□ -1.56
UBXN4-205ENST00000467065 H2BFWTQ7Z2G1 175 aa5.33□□□□□ -1.56
UBXN4-205ENST00000467065 LDLRAD3Q86YD5 345 aa5.33□□□□□ -1.56
UBXN4-205ENST00000467065 THNSL2Q86YJ6 484 aa5.33□□□□□ -1.56
UBXN4-205ENST00000467065 PDPNQ86YL7 162 aa5.33□□□□□ -1.56
UBXN4-205ENST00000467065 SPAG16Q8N0X2 631 aa5.33□□□□□ -1.56
UBXN4-205ENST00000467065 LGI3Q8N145 548 aa5.33□□□□□ -1.56
UBXN4-205ENST00000467065 MFSD4AQ8N468 514 aa5.33□□□□□ -1.56
UBXN4-205ENST00000467065 TMEM86BQ8N661 226 aa5.33□□□□□ -1.56
UBXN4-205ENST00000467065 MINDY2Q8NBR6 621 aa5.33□□□□□ -1.56
UBXN4-205ENST00000467065 OR4F5Q8NH21 305 aa5.33□□□□□ -1.56
UBXN4-205ENST00000467065 OR51H1Q8NH63 302 aa5.33□□□□□ -1.56
UBXN4-205ENST00000467065 OR4A16Q8NH70 328 aa5.33□□□□□ -1.56
UBXN4-205ENST00000467065 WFDC12Q8WWY7 111 aa5.33□□□□□ -1.56
UBXN4-205ENST00000467065 PHB2Q99623 299 aa5.33□□□□□ -1.56
UBXN4-205ENST00000467065 RSRP1Q9BUV0 290 aa5.33□□□□□ -1.56
UBXN4-205ENST00000467065 GON7Q9BXV9 100 aa5.33□□□□□ -1.56
UBXN4-205ENST00000467065 TOLLIPQ9H0E2 274 aa5.33□□□□□ -1.56
UBXN4-205ENST00000467065 ENY2Q9NPA8 101 aa5.33□□□□□ -1.56
UBXN4-205ENST00000467065 SDHAF2Q9NX18 166 aa5.33□□□□□ -1.56
UBXN4-205ENST00000467065 SLC2A8Q9NY64 477 aa5.33□□□□□ -1.56
UBXN4-205ENST00000467065 FKBP11Q9NYL4 201 aa5.33□□□□□ -1.56
UBXN4-205ENST00000467065 ZNRD1Q9P1U0 126 aa5.33□□□□□ -1.56
UBXN4-205ENST00000467065 ANAPC10Q9UM13 185 aa5.33□□□□□ -1.56
UBXN4-205ENST00000467065 POMT1Q9Y6A1 747 aa5.33□□□□□ -1.56
UBXN4-205ENST00000467065 TRAV6A0A075B6T7 132 aa5.32□□□□□ -1.56
UBXN4-205ENST00000467065 TIMM23O14925 209 aa5.32□□□□□ -1.56
UBXN4-205ENST00000467065 SSNA1O43805 119 aa5.32□□□□□ -1.56
UBXN4-205ENST00000467065 PRAF2O60831 178 aa5.32□□□□□ -1.56
UBXN4-205ENST00000467065 PGLYRP1O75594 196 aaPredicted RBP5.32□□□□□ -1.56
UBXN4-205ENST00000467065 NDUFA7O95182 113 aa5.32□□□□□ -1.56
UBXN4-205ENST00000467065 PTTG1O95997 202 aa5.32□□□□□ -1.56
UBXN4-205ENST00000467065 IGKV1D-33P01593 117 aa5.32□□□□□ -1.56
UBXN4-205ENST00000467065 IGKV1-33P01594 117 aa5.32□□□□□ -1.56
UBXN4-205ENST00000467065 IGLV1-47P01700 117 aa5.32□□□□□ -1.56
UBXN4-205ENST00000467065 TCRBP04435 133 aa5.32□□□□□ -1.56
UBXN4-205ENST00000467065 F2RP25116 425 aa5.32□□□□□ -1.56
UBXN4-205ENST00000467065 PAX6P26367 422 aa5.32□□□□□ -1.56
UBXN4-205ENST00000467065 IER3P46695 156 aa5.32□□□□□ -1.56
UBXN4-205ENST00000467065 CCR6P51684 374 aa5.32□□□□□ -1.56
UBXN4-205ENST00000467065 ZNF134P52741 427 aa5.32□□□□□ -1.56
UBXN4-205ENST00000467065 TMEM267Q0VDI3 215 aaPredicted RBP5.32□□□□□ -1.56
UBXN4-205ENST00000467065 HERPUD1Q15011 391 aa5.32□□□□□ -1.56
UBXN4-205ENST00000467065 MMDQ15546 238 aa5.32□□□□□ -1.56
UBXN4-205ENST00000467065 RPL39P5Q59GN2 51 aa5.32□□□□□ -1.56
UBXN4-205ENST00000467065 C9orf152Q5JTZ5 239 aa5.32□□□□□ -1.56
UBXN4-205ENST00000467065 PRR31Q5SQ13 230 aa5.32□□□□□ -1.56
UBXN4-205ENST00000467065 HCP5Q6MZN7 132 aa5.32□□□□□ -1.56
UBXN4-205ENST00000467065 FAAP20Q6NZ36 180 aa5.32□□□□□ -1.56
UBXN4-205ENST00000467065 ZNF833PQ6ZTB9 187 aa5.32□□□□□ -1.56
UBXN4-205ENST00000467065 C16orf82Q7Z2V1 217 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 127.5 ms