RNA–Protein interactions for RNA: ENST00000466532.1

COL9A3-206, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-206ENST00000466532 GINS4Q9BRT9 223 aa14.66□□□□□ -0.06
COL9A3-206ENST00000466532 TINAGL1Q9GZM7 467 aaPredicted RBP14.66□□□□□ -0.06
COL9A3-206ENST00000466532 COA4Q9NYJ1 87 aa14.66□□□□□ -0.06
COL9A3-206ENST00000466532 TRAV1-2A0A0B4J238 106 aa14.65□□□□□ -0.06
COL9A3-206ENST00000466532 SHISA3A0PJX4 238 aa14.65□□□□□ -0.06
COL9A3-206ENST00000466532 IFITM5A6NNB3 132 aa14.65□□□□□ -0.06
COL9A3-206ENST00000466532 SRRM4A7MD48 611 aaKnown RBP14.65□□□□□ -0.06
COL9A3-206ENST00000466532 RAB27BO00194 218 aa14.65□□□□□ -0.06
COL9A3-206ENST00000466532 APELAP0DMC3 54 aa14.65□□□□□ -0.06
COL9A3-206ENST00000466532 IGHV4-30-4P0DP06 118 aa14.65□□□□□ -0.06
COL9A3-206ENST00000466532 RRASP10301 218 aa14.65□□□□□ -0.06
COL9A3-206ENST00000466532 HIST1H1DP16402 221 aaKnown RBP14.65□□□□□ -0.06
COL9A3-206ENST00000466532 RAB6AP20340 208 aa14.65□□□□□ -0.06
COL9A3-206ENST00000466532 AADACP22760 399 aa14.65□□□□□ -0.06
COL9A3-206ENST00000466532 MYL9P24844 172 aa14.65□□□□□ -0.06
COL9A3-206ENST00000466532 ARFRP1Q13795 201 aa14.65□□□□□ -0.06
COL9A3-206ENST00000466532 KLF5Q13887 457 aaPredicted RBP14.65□□□□□ -0.06
COL9A3-206ENST00000466532 SGPP2Q8IWX5 399 aa14.65□□□□□ -0.06
COL9A3-206ENST00000466532 Q8N1Y9 231 aa14.65□□□□□ -0.06
COL9A3-206ENST00000466532 ERICH4A6NGS2 130 aa14.64□□□□□ -0.07
COL9A3-206ENST00000466532 BRI3O95415 125 aa14.64□□□□□ -0.07
COL9A3-206ENST00000466532 TALDO1P37837 337 aa14.64□□□□□ -0.07
COL9A3-206ENST00000466532 MRGPRG-AS1Q2M3A8 158 aa14.64□□□□□ -0.07
COL9A3-206ENST00000466532 VMA21Q3ZAQ7 101 aa14.64□□□□□ -0.07
COL9A3-206ENST00000466532 OR9G4Q8NGQ1 327 aa14.64□□□□□ -0.07
COL9A3-206ENST00000466532 ADTRPQ96IZ2 230 aa14.64□□□□□ -0.07
COL9A3-206ENST00000466532 PEF1Q9UBV8 284 aaKnown RBP14.64□□□□□ -0.07
COL9A3-206ENST00000466532 RYR2Q92736 4967 aa14.63□□□□□ -0.07
COL9A3-206ENST00000466532 A0A0B4J203 849 aa14.63□□□□□ -0.07
COL9A3-206ENST00000466532 METTL21EPA6NDL7 271 aa14.63□□□□□ -0.07
COL9A3-206ENST00000466532 CRYZL1O95825 349 aa14.63□□□□□ -0.07
COL9A3-206ENST00000466532 RAB3BP20337 219 aa14.63□□□□□ -0.07
COL9A3-206ENST00000466532 DUTP33316 252 aaKnown RBP14.63□□□□□ -0.07
COL9A3-206ENST00000466532 SYNJ2BPP57105 145 aa14.63□□□□□ -0.07
COL9A3-206ENST00000466532 DYRK1AQ13627 763 aa14.63□□□□□ -0.07
COL9A3-206ENST00000466532 TNXAQ16473 311 aa14.63□□□□□ -0.07
COL9A3-206ENST00000466532 ZNF343Q6P1L6 599 aa14.63□□□□□ -0.07
COL9A3-206ENST00000466532 H1FOOQ8IZA3 346 aaPredicted RBP14.63□□□□□ -0.07
COL9A3-206ENST00000466532 TEX45Q8NA69 505 aa14.63□□□□□ -0.07
COL9A3-206ENST00000466532 DDB2Q92466 427 aa14.63□□□□□ -0.07
COL9A3-206ENST00000466532 USMG5Q96IX5 58 aa14.63□□□□□ -0.07
COL9A3-206ENST00000466532 CNBD2Q96M20 576 aa14.63□□□□□ -0.07
COL9A3-206ENST00000466532 TM2D3Q9BRN9 247 aa14.63□□□□□ -0.07
COL9A3-206ENST00000466532 CENPOQ9BU64 300 aa14.63□□□□□ -0.07
COL9A3-206ENST00000466532 NDUFB11Q9NX14 153 aa14.63□□□□□ -0.07
COL9A3-206ENST00000466532 BLOC1S6Q9UL45 172 aa14.63□□□□□ -0.07
COL9A3-206ENST00000466532 IGKV1D-8A0A087WSZ0 117 aa14.62□□□□□ -0.07
COL9A3-206ENST00000466532 TRDV1A0A1B0GX56 115 aa14.62□□□□□ -0.07
COL9A3-206ENST00000466532 MSGN1A6NI15 193 aa14.62□□□□□ -0.07
COL9A3-206ENST00000466532 LINC00473A8K010 186 aa14.62□□□□□ -0.07
COL9A3-206ENST00000466532 TRBV12-3P01733 135 aa14.62□□□□□ -0.07
COL9A3-206ENST00000466532 LYL1P12980 280 aa14.62□□□□□ -0.07
COL9A3-206ENST00000466532 UBE2KP61086 200 aa14.62□□□□□ -0.07
COL9A3-206ENST00000466532 PRSS8Q16651 343 aa14.62□□□□□ -0.07
COL9A3-206ENST00000466532 IL34Q6ZMJ4 242 aa14.62□□□□□ -0.07
COL9A3-206ENST00000466532 IDO2Q6ZQW0 420 aa14.62□□□□□ -0.07
COL9A3-206ENST00000466532 Q6ZS49 121 aa14.62□□□□□ -0.07
COL9A3-206ENST00000466532 ACOT12Q8WYK0 555 aa14.62□□□□□ -0.07
COL9A3-206ENST00000466532 VCX3BQ9H321 246 aa14.62□□□□□ -0.07
COL9A3-206ENST00000466532 C19orf73Q9NVV2 129 aa14.62□□□□□ -0.07
COL9A3-206ENST00000466532 ADAM30Q9UKF2 790 aa14.62□□□□□ -0.07
COL9A3-206ENST00000466532 A8MZ25 164 aa14.61□□□□□ -0.07
COL9A3-206ENST00000466532 H0Y980 276 aa14.61□□□□□ -0.07
COL9A3-206ENST00000466532 MPPED1O15442 326 aa14.61□□□□□ -0.07
COL9A3-206ENST00000466532 OR9G9P0C7N8 305 aa14.61□□□□□ -0.07
COL9A3-206ENST00000466532 TATDN3Q17R31 274 aa14.61□□□□□ -0.07
COL9A3-206ENST00000466532 RPEL1Q2QD12 228 aa14.61□□□□□ -0.07
COL9A3-206ENST00000466532 IZUMO2Q6UXV1 221 aa14.61□□□□□ -0.07
COL9A3-206ENST00000466532 ADAD2Q8NCV1 583 aaKnown RBP14.61□□□□□ -0.07
COL9A3-206ENST00000466532 OSR1Q8TAX0 266 aaPredicted RBP14.61□□□□□ -0.07
COL9A3-206ENST00000466532 SRSF12Q8WXF0 261 aaKnown RBP14.61□□□□□ -0.07
COL9A3-206ENST00000466532 CITED4Q96RK1 184 aa14.61□□□□□ -0.07
COL9A3-206ENST00000466532 ATG5Q9H1Y0 275 aa14.61□□□□□ -0.07
COL9A3-206ENST00000466532 PALMDQ9NP74 551 aa14.61□□□□□ -0.07
COL9A3-206ENST00000466532 ELF5Q9UKW6 265 aaPredicted RBP14.61□□□□□ -0.07
COL9A3-206ENST00000466532 J3QRK9 145 aa14.6□□□□□ -0.07
COL9A3-206ENST00000466532 RBMXL2O75526 392 aaKnown RBP14.6□□□□□ -0.07
COL9A3-206ENST00000466532 HSPA13P48723 471 aa14.6□□□□□ -0.07
COL9A3-206ENST00000466532 ARL6IP1Q15041 203 aa14.6□□□□□ -0.07
COL9A3-206ENST00000466532 C22orf42Q6IC83 251 aa14.6□□□□□ -0.07
COL9A3-206ENST00000466532 SACSQ9NZJ4 4579 aa14.6□□□□□ -0.07
COL9A3-206ENST00000466532 SMIM30A4D0T7 59 aa14.59□□□□□ -0.07
COL9A3-206ENST00000466532 CSN3P07498 182 aa14.59□□□□□ -0.07
COL9A3-206ENST00000466532 DTYMKP23919 212 aa14.59□□□□□ -0.07
COL9A3-206ENST00000466532 NR2C2APQ86WQ0 139 aa14.59□□□□□ -0.07
COL9A3-206ENST00000466532 SNAPC3Q92966 411 aa14.59□□□□□ -0.07
COL9A3-206ENST00000466532 STARD9Q9P2P6 4700 aa14.58□□□□□ -0.08
COL9A3-206ENST00000466532 CSMD3Q7Z407 3707 aa14.58□□□□□ -0.08
COL9A3-206ENST00000466532 PRH1P02810 166 aa14.58□□□□□ -0.08
COL9A3-206ENST00000466532 SAA1P0DJI8 122 aaPredicted RBP14.58□□□□□ -0.08
COL9A3-206ENST00000466532 GALP22466 123 aa14.58□□□□□ -0.08
COL9A3-206ENST00000466532 CDK10Q15131 360 aa14.58□□□□□ -0.08
COL9A3-206ENST00000466532 CDNFQ49AH0 187 aa14.58□□□□□ -0.08
COL9A3-206ENST00000466532 LCN12Q6JVE5 192 aa14.58□□□□□ -0.08
COL9A3-206ENST00000466532 GTSCR1Q86UQ5 136 aa14.58□□□□□ -0.08
COL9A3-206ENST00000466532 ZNF645Q8N7E2 425 aa14.58□□□□□ -0.08
COL9A3-206ENST00000466532 DCUN1D5Q9BTE7 237 aa14.58□□□□□ -0.08
COL9A3-206ENST00000466532 ST6GALNAC5Q9BVH7 336 aa14.58□□□□□ -0.08
COL9A3-206ENST00000466532 ZNF430Q9H8G1 570 aaPredicted RBP14.58□□□□□ -0.08
COL9A3-206ENST00000466532 AKIP1Q9NQ31 210 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms