RNA–Protein interactions for RNA: ENST00000466288.1

CXCR4-203, Transcript of C-X-C motif chemokine receptor 4, humanhuman

TSL 1 (best)

Gene CXCR4, Length 1,485 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-203ENST00000466288 SNRPBP14678 240 aaKnown RBP10.98□□□□□ -0.65
CXCR4-203ENST00000466288 SOX2P48431 317 aa10.98□□□□□ -0.65
CXCR4-203ENST00000466288 TPPP2P59282 170 aa10.98□□□□□ -0.65
CXCR4-203ENST00000466288 AP3S2P59780 193 aa10.98□□□□□ -0.65
CXCR4-203ENST00000466288 DYRK1AQ13627 763 aa10.98□□□□□ -0.65
CXCR4-203ENST00000466288 KLF5Q13887 457 aaPredicted RBP10.98□□□□□ -0.65
CXCR4-203ENST00000466288 P2RY14Q15391 338 aa10.98□□□□□ -0.65
CXCR4-203ENST00000466288 TMEM30BQ3MIR4 351 aa10.98□□□□□ -0.65
CXCR4-203ENST00000466288 ZNF529Q6P280 563 aa10.98□□□□□ -0.65
CXCR4-203ENST00000466288 CADM3Q8N126 398 aa10.98□□□□□ -0.65
CXCR4-203ENST00000466288 DRAXINQ8NBI3 349 aaPredicted RBP10.98□□□□□ -0.65
CXCR4-203ENST00000466288 OR51A2Q8NGJ7 313 aa10.98□□□□□ -0.65
CXCR4-203ENST00000466288 OR9G4Q8NGQ1 327 aa10.98□□□□□ -0.65
CXCR4-203ENST00000466288 ENKURQ8TC29 256 aa10.98□□□□□ -0.65
CXCR4-203ENST00000466288 PTX4Q96A99 478 aa10.98□□□□□ -0.65
CXCR4-203ENST00000466288 NEURL2Q9BR09 285 aa10.98□□□□□ -0.65
CXCR4-203ENST00000466288 COPZ2Q9P299 210 aa10.98□□□□□ -0.65
CXCR4-203ENST00000466288 IZUMO1RA6ND01 250 aa10.97□□□□□ -0.65
CXCR4-203ENST00000466288 FCN1O00602 326 aa10.97□□□□□ -0.65
CXCR4-203ENST00000466288 PLA2G10O15496 165 aa10.97□□□□□ -0.65
CXCR4-203ENST00000466288 SPINT2O43291 252 aa10.97□□□□□ -0.65
CXCR4-203ENST00000466288 LYRM1O43325 122 aa10.97□□□□□ -0.65
CXCR4-203ENST00000466288 HBZP02008 142 aa10.97□□□□□ -0.65
CXCR4-203ENST00000466288 ZP3P21754 424 aa10.97□□□□□ -0.65
CXCR4-203ENST00000466288 RFX2P48378 723 aa10.97□□□□□ -0.65
CXCR4-203ENST00000466288 TMEM267Q0VDI3 215 aaPredicted RBP10.97□□□□□ -0.65
CXCR4-203ENST00000466288 ACTBL2Q562R1 376 aa10.97□□□□□ -0.65
CXCR4-203ENST00000466288 PLET1Q6UQ28 207 aa10.97□□□□□ -0.65
CXCR4-203ENST00000466288 NRARPQ7Z6K4 114 aa10.97□□□□□ -0.65
CXCR4-203ENST00000466288 OR6M1Q8NGM8 313 aa10.97□□□□□ -0.65
CXCR4-203ENST00000466288 OR1L1Q8NH94 360 aa10.97□□□□□ -0.65
CXCR4-203ENST00000466288 LGALS14Q8TCE9 139 aa10.97□□□□□ -0.65
CXCR4-203ENST00000466288 SMIM4Q8WVI0 70 aa10.97□□□□□ -0.65
CXCR4-203ENST00000466288 CPNE2Q96FN4 548 aaPredicted RBP10.97□□□□□ -0.65
CXCR4-203ENST00000466288 GPER1Q99527 375 aa10.97□□□□□ -0.65
CXCR4-203ENST00000466288 GFI1Q99684 422 aa10.97□□□□□ -0.65
CXCR4-203ENST00000466288 C11orf54Q9H0W9 315 aaPredicted RBP10.97□□□□□ -0.65
CXCR4-203ENST00000466288 FBXL15Q9H469 300 aa10.97□□□□□ -0.65
CXCR4-203ENST00000466288 SLA2Q9H6Q3 261 aa10.97□□□□□ -0.65
CXCR4-203ENST00000466288 PLEKHA3Q9HB20 300 aa10.97□□□□□ -0.65
CXCR4-203ENST00000466288 RANGRFQ9HD47 186 aaPredicted RBP10.97□□□□□ -0.65
CXCR4-203ENST00000466288 TRAV8-7A0A075B6U6 113 aa10.96□□□□□ -0.65
CXCR4-203ENST00000466288 GABARAPH6UMI1 98 aa10.96□□□□□ -0.65
CXCR4-203ENST00000466288 SCGNO76038 276 aa10.96□□□□□ -0.65
CXCR4-203ENST00000466288 GSTT2BP0CG30 244 aa10.96□□□□□ -0.65
CXCR4-203ENST00000466288 RAB3AP20336 220 aa10.96□□□□□ -0.65
CXCR4-203ENST00000466288 SSBP1Q04837 148 aaKnown RBP10.96□□□□□ -0.65
CXCR4-203ENST00000466288 RAB11BQ15907 218 aa10.96□□□□□ -0.65
CXCR4-203ENST00000466288 MPV17LQ2QL34 196 aa10.96□□□□□ -0.65
CXCR4-203ENST00000466288 MORN2Q502X0 79 aa10.96□□□□□ -0.65
CXCR4-203ENST00000466288 AKIRIN2Q53H80 203 aa10.96□□□□□ -0.65
CXCR4-203ENST00000466288 C1orf100Q5SVJ3 147 aa10.96□□□□□ -0.65
CXCR4-203ENST00000466288 ATAD3CQ5T2N8 411 aa10.96□□□□□ -0.65
CXCR4-203ENST00000466288 LCN12Q6JVE5 192 aa10.96□□□□□ -0.65
CXCR4-203ENST00000466288 LINC00596Q86U02 117 aa10.96□□□□□ -0.65
CXCR4-203ENST00000466288 PRR18Q8N4B5 295 aa10.96□□□□□ -0.65
CXCR4-203ENST00000466288 RPP25LQ8N5L8 163 aaKnown RBP10.96□□□□□ -0.65
CXCR4-203ENST00000466288 OR5H6Q8NGV6 325 aa10.96□□□□□ -0.65
CXCR4-203ENST00000466288 TRIM63Q969Q1 353 aa10.96□□□□□ -0.65
CXCR4-203ENST00000466288 UQCC2Q9BRT2 126 aa10.96□□□□□ -0.65
CXCR4-203ENST00000466288 FAM103A1Q9BTL3 118 aaKnown RBP10.96□□□□□ -0.65
CXCR4-203ENST00000466288 ST6GALNAC5Q9BVH7 336 aa10.96□□□□□ -0.65
CXCR4-203ENST00000466288 DIABLOQ9NR28 239 aa10.96□□□□□ -0.65
CXCR4-203ENST00000466288 IL36GQ9NZH8 169 aa10.96□□□□□ -0.65
CXCR4-203ENST00000466288 GAB2Q9UQC2 676 aa10.96□□□□□ -0.65
CXCR4-203ENST00000466288 NAP1L6A6NFF2 107 aa10.95□□□□□ -0.66
CXCR4-203ENST00000466288 GNMTQ14749 295 aa10.95□□□□□ -0.66
CXCR4-203ENST00000466288 HES5Q5TA89 166 aa10.95□□□□□ -0.66
CXCR4-203ENST00000466288 UNQ5815/PRO19632Q6UWF5 114 aa10.95□□□□□ -0.66
CXCR4-203ENST00000466288 ZNF833PQ6ZTB9 187 aa10.95□□□□□ -0.66
CXCR4-203ENST00000466288 PPP1R27Q86WC6 154 aa10.95□□□□□ -0.66
CXCR4-203ENST00000466288 LFNGQ8NES3 379 aa10.95□□□□□ -0.66
CXCR4-203ENST00000466288 OR4K15Q8NH41 348 aa10.95□□□□□ -0.66
CXCR4-203ENST00000466288 NEK7Q8TDX7 302 aa10.95□□□□□ -0.66
CXCR4-203ENST00000466288 ABHD1Q96SE0 405 aa10.95□□□□□ -0.66
CXCR4-203ENST00000466288 ABHD14AQ9BUJ0 271 aa10.95□□□□□ -0.66
CXCR4-203ENST00000466288 RAB9BQ9NP90 201 aa10.95□□□□□ -0.66
CXCR4-203ENST00000466288 RHBDL2Q9NX52 303 aa10.95□□□□□ -0.66
CXCR4-203ENST00000466288 SIGLEC8Q9NYZ4 499 aa10.95□□□□□ -0.66
CXCR4-203ENST00000466288 TRAPPC2LQ9UL33 140 aa10.95□□□□□ -0.66
CXCR4-203ENST00000466288 RNF150Q9ULK6 438 aa10.95□□□□□ -0.66
CXCR4-203ENST00000466288 DNAH6Q9C0G6 4158 aa10.95□□□□□ -0.66
CXCR4-203ENST00000466288 FAM240BA0A1B0GVZ2 78 aa10.94□□□□□ -0.66
CXCR4-203ENST00000466288 RRHO14718 337 aa10.94□□□□□ -0.66
CXCR4-203ENST00000466288 XRCC3O43542 346 aa10.94□□□□□ -0.66
CXCR4-203ENST00000466288 TRGV3P03979 118 aa10.94□□□□□ -0.66
CXCR4-203ENST00000466288 MAS1P04201 325 aa10.94□□□□□ -0.66
CXCR4-203ENST00000466288 CSN3P07498 182 aa10.94□□□□□ -0.66
CXCR4-203ENST00000466288 RCC1P18754 421 aaPredicted RBP10.94□□□□□ -0.66
CXCR4-203ENST00000466288 RAB6AP20340 208 aa10.94□□□□□ -0.66
CXCR4-203ENST00000466288 SYNJ2BPP57105 145 aa10.94□□□□□ -0.66
CXCR4-203ENST00000466288 ZNF57Q68EA5 555 aaPredicted RBP10.94□□□□□ -0.66
CXCR4-203ENST00000466288 GAPTQ8N292 157 aa10.94□□□□□ -0.66
CXCR4-203ENST00000466288 ABHD5Q8WTS1 349 aa10.94□□□□□ -0.66
CXCR4-203ENST00000466288 MARVELD1Q9BSK0 173 aa10.94□□□□□ -0.66
CXCR4-203ENST00000466288 METTL9Q9H1A3 318 aa10.94□□□□□ -0.66
CXCR4-203ENST00000466288 TMEM138Q9NPI0 162 aa10.94□□□□□ -0.66
CXCR4-203ENST00000466288 OR2S2Q9NQN1 319 aa10.94□□□□□ -0.66
CXCR4-203ENST00000466288 TAS2R8Q9NYW2 309 aa10.94□□□□□ -0.66
CXCR4-203ENST00000466288 RCC2Q9P258 522 aaKnown RBP10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms