RNA–Protein interactions for RNA: ENST00000465514.1

USP39-212, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-212ENST00000465514 SYNJ2BPP57105 145 aa7.38□□□□□ -1.23
USP39-212ENST00000465514 DEFA5Q01523 94 aa7.38□□□□□ -1.23
USP39-212ENST00000465514 MED22Q15528 200 aa7.38□□□□□ -1.23
USP39-212ENST00000465514 RAB11BQ15907 218 aa7.38□□□□□ -1.23
USP39-212ENST00000465514 MOGAT2Q3SYC2 334 aa7.38□□□□□ -1.23
USP39-212ENST00000465514 LIPKQ5VXJ0 399 aa7.38□□□□□ -1.23
USP39-212ENST00000465514 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.38□□□□□ -1.23
USP39-212ENST00000465514 OR9G4Q8NGQ1 327 aa7.38□□□□□ -1.23
USP39-212ENST00000465514 TMEM203Q969S6 136 aa7.38□□□□□ -1.23
USP39-212ENST00000465514 CMSS1Q9BQ75 279 aaKnown RBP7.38□□□□□ -1.23
USP39-212ENST00000465514 TINAGL1Q9GZM7 467 aaPredicted RBP7.38□□□□□ -1.23
USP39-212ENST00000465514 ADAM30Q9UKF2 790 aa7.38□□□□□ -1.23
USP39-212ENST00000465514 AK6Q9Y3D8 172 aaKnown RBP7.38□□□□□ -1.23
USP39-212ENST00000465514 DNAH2Q9P225 4427 aa7.38□□□□□ -1.23
USP39-212ENST00000465514 H0Y980 276 aa7.37□□□□□ -1.23
USP39-212ENST00000465514 TRBV12-3P01733 135 aa7.37□□□□□ -1.23
USP39-212ENST00000465514 CSN3P07498 182 aa7.37□□□□□ -1.23
USP39-212ENST00000465514 CD3GP09693 182 aa7.37□□□□□ -1.23
USP39-212ENST00000465514 AADACP22760 399 aa7.37□□□□□ -1.23
USP39-212ENST00000465514 LGALS7P47929 136 aa7.37□□□□□ -1.23
USP39-212ENST00000465514 CLDN12P56749 244 aa7.37□□□□□ -1.23
USP39-212ENST00000465514 PLAC9Q5JTB6 97 aa7.37□□□□□ -1.23
USP39-212ENST00000465514 OGFRL1Q5TC84 451 aaPredicted RBP7.37□□□□□ -1.23
USP39-212ENST00000465514 ZNF343Q6P1L6 599 aa7.37□□□□□ -1.23
USP39-212ENST00000465514 TMEM91Q6ZNR0 172 aa7.37□□□□□ -1.23
USP39-212ENST00000465514 OR56B1Q8NGI3 324 aa7.37□□□□□ -1.23
USP39-212ENST00000465514 OR4A4PQ8NGN8 299 aa7.37□□□□□ -1.23
USP39-212ENST00000465514 UFD1Q92890 307 aa7.37□□□□□ -1.23
USP39-212ENST00000465514 TMEM68Q96MH6 324 aa7.37□□□□□ -1.23
USP39-212ENST00000465514 PEF1Q9UBV8 284 aaKnown RBP7.37□□□□□ -1.23
USP39-212ENST00000465514 CEPT1Q9Y6K0 416 aa7.37□□□□□ -1.23
USP39-212ENST00000465514 IZUMO1RA6ND01 250 aa7.36□□□□□ -1.23
USP39-212ENST00000465514 MSGN1A6NI15 193 aa7.36□□□□□ -1.23
USP39-212ENST00000465514 SRRM4A7MD48 611 aaKnown RBP7.36□□□□□ -1.23
USP39-212ENST00000465514 BET1O15155 118 aa7.36□□□□□ -1.23
USP39-212ENST00000465514 SHOXO15266 292 aa7.36□□□□□ -1.23
USP39-212ENST00000465514 FABP7O15540 132 aa7.36□□□□□ -1.23
USP39-212ENST00000465514 APELAP0DMC3 54 aa7.36□□□□□ -1.23
USP39-212ENST00000465514 SERPINB10P48595 397 aa7.36□□□□□ -1.23
USP39-212ENST00000465514 RPS25P62851 125 aaKnown RBP7.36□□□□□ -1.23
USP39-212ENST00000465514 PLA2G7Q13093 441 aa7.36□□□□□ -1.23
USP39-212ENST00000465514 CBX3Q13185 183 aa7.36□□□□□ -1.23
USP39-212ENST00000465514 DYRK1AQ13627 763 aa7.36□□□□□ -1.23
USP39-212ENST00000465514 IRF3Q14653 427 aa7.36□□□□□ -1.23
USP39-212ENST00000465514 TATDN3Q17R31 274 aa7.36□□□□□ -1.23
USP39-212ENST00000465514 MRGPRG-AS1Q2M3A8 158 aa7.36□□□□□ -1.23
USP39-212ENST00000465514 C2orf76Q3KRA6 126 aa7.36□□□□□ -1.23
USP39-212ENST00000465514 IGSF11Q5DX21 431 aa7.36□□□□□ -1.23
USP39-212ENST00000465514 GTSCR1Q86UQ5 136 aa7.36□□□□□ -1.23
USP39-212ENST00000465514 BVESQ8NE79 360 aa7.36□□□□□ -1.23
USP39-212ENST00000465514 FAM3DQ96BQ1 224 aa7.36□□□□□ -1.23
USP39-212ENST00000465514 USMG5Q96IX5 58 aa7.36□□□□□ -1.23
USP39-212ENST00000465514 HARBI1Q96MB7 349 aa7.36□□□□□ -1.23
USP39-212ENST00000465514 THAP7Q9BT49 309 aaPredicted RBP7.36□□□□□ -1.23
USP39-212ENST00000465514 OR2D2Q9H210 308 aa7.36□□□□□ -1.23
USP39-212ENST00000465514 SDHAF2Q9NX18 166 aa7.36□□□□□ -1.23
USP39-212ENST00000465514 SCN3BQ9NY72 215 aa7.36□□□□□ -1.23
USP39-212ENST00000465514 COA4Q9NYJ1 87 aa7.36□□□□□ -1.23
USP39-212ENST00000465514 HSPG2P98160 4391 aa7.36□□□□□ -1.23
USP39-212ENST00000465514 DYNC1H1Q14204 4646 aaKnown RBP7.35□□□□□ -1.23
USP39-212ENST00000465514 CASQ2O14958 399 aaPredicted RBP7.35□□□□□ -1.23
USP39-212ENST00000465514 DENRO43583 198 aaKnown RBP7.35□□□□□ -1.23
USP39-212ENST00000465514 RBMXL2O75526 392 aaKnown RBP7.35□□□□□ -1.23
USP39-212ENST00000465514 ARL6IP5O75915 188 aa7.35□□□□□ -1.23
USP39-212ENST00000465514 GSTT2P0CG29 244 aa7.35□□□□□ -1.23
USP39-212ENST00000465514 GSTT2BP0CG30 244 aa7.35□□□□□ -1.23
USP39-212ENST00000465514 HSMCR30P0CW71 290 aa7.35□□□□□ -1.23
USP39-212ENST00000465514 MRPS15P82914 257 aaKnown RBP7.35□□□□□ -1.23
USP39-212ENST00000465514 TAGLNQ01995 201 aaKnown RBP7.35□□□□□ -1.23
USP39-212ENST00000465514 TPBGQ13641 420 aa7.35□□□□□ -1.23
USP39-212ENST00000465514 RTL8BQ17RB0 113 aa7.35□□□□□ -1.23
USP39-212ENST00000465514 RPEL1Q2QD12 228 aa7.35□□□□□ -1.23
USP39-212ENST00000465514 TMEM177Q53S58 311 aa7.35□□□□□ -1.23
USP39-212ENST00000465514 LCN12Q6JVE5 192 aa7.35□□□□□ -1.23
USP39-212ENST00000465514 CEMP1Q6PRD7 247 aaPredicted RBP7.35□□□□□ -1.23
USP39-212ENST00000465514 Q8N402 240 aa7.35□□□□□ -1.23
USP39-212ENST00000465514 ADAD2Q8NCV1 583 aaKnown RBP7.35□□□□□ -1.23
USP39-212ENST00000465514 OR10J5Q8NHC4 309 aa7.35□□□□□ -1.23
USP39-212ENST00000465514 SNAPC3Q92966 411 aa7.35□□□□□ -1.23
USP39-212ENST00000465514 C5orf30Q96GV9 206 aa7.35□□□□□ -1.23
USP39-212ENST00000465514 PHB2Q99623 299 aa7.35□□□□□ -1.23
USP39-212ENST00000465514 PGPEP1Q9NXJ5 209 aa7.35□□□□□ -1.23
USP39-212ENST00000465514 SIGLEC8Q9NYZ4 499 aa7.35□□□□□ -1.23
USP39-212ENST00000465514 KCNK7Q9Y2U2 307 aa7.35□□□□□ -1.23
USP39-212ENST00000465514 TRBV6-7A0A0A0MS04 114 aa7.34□□□□□ -1.23
USP39-212ENST00000465514 TMEM272A0A1B0GTI8 110 aa7.34□□□□□ -1.23
USP39-212ENST00000465514 A0A1B0GVY2 172 aa7.34□□□□□ -1.23
USP39-212ENST00000465514 OR2A4O95047 310 aa7.34□□□□□ -1.23
USP39-212ENST00000465514 FCGR3AP08637 254 aa7.34□□□□□ -1.23
USP39-212ENST00000465514 OR9G9P0C7N8 305 aa7.34□□□□□ -1.23
USP39-212ENST00000465514 RRASP10301 218 aa7.34□□□□□ -1.23
USP39-212ENST00000465514 CALRP27797 417 aaKnown RBP7.34□□□□□ -1.23
USP39-212ENST00000465514 MECP2P51608 486 aaKnown RBP7.34□□□□□ -1.23
USP39-212ENST00000465514 FABP5Q01469 135 aa7.34□□□□□ -1.23
USP39-212ENST00000465514 TRAM1Q15629 374 aa7.34□□□□□ -1.23
USP39-212ENST00000465514 TNXAQ16473 311 aa7.34□□□□□ -1.23
USP39-212ENST00000465514 PRSS8Q16651 343 aa7.34□□□□□ -1.23
USP39-212ENST00000465514 HES5Q5TA89 166 aa7.34□□□□□ -1.23
USP39-212ENST00000465514 LGALS9CQ6DKI2 356 aa7.34□□□□□ -1.23
USP39-212ENST00000465514 TEX45Q8NA69 505 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms