RNA–Protein interactions for RNA: ENST00000458038.5

CPNE1-220, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-220ENST00000458038 AK6Q9Y3D8 172 aaKnown RBP16.4■□□□□ 0.22
CPNE1-220ENST00000458038 SACSQ9NZJ4 4579 aa16.4■□□□□ 0.22
CPNE1-220ENST00000458038 BET1O15155 118 aa16.39■□□□□ 0.21
CPNE1-220ENST00000458038 CSN3P07498 182 aa16.39■□□□□ 0.21
CPNE1-220ENST00000458038 IRF3Q14653 427 aa16.39■□□□□ 0.21
CPNE1-220ENST00000458038 VMA21Q3ZAQ7 101 aa16.39■□□□□ 0.21
CPNE1-220ENST00000458038 PLAC9Q5JTB6 97 aa16.39■□□□□ 0.21
CPNE1-220ENST00000458038 PHB2Q99623 299 aa16.39■□□□□ 0.21
CPNE1-220ENST00000458038 COA4Q9NYJ1 87 aa16.39■□□□□ 0.21
CPNE1-220ENST00000458038 V9GY05 133 aa16.39■□□□□ 0.21
CPNE1-220ENST00000458038 TRBV6-7A0A0A0MS04 114 aa16.38■□□□□ 0.21
CPNE1-220ENST00000458038 DYRK1AQ13627 763 aa16.38■□□□□ 0.21
CPNE1-220ENST00000458038 FAM209BQ5JX69 171 aa16.38■□□□□ 0.21
CPNE1-220ENST00000458038 RAB3CQ96E17 227 aa16.38■□□□□ 0.21
CPNE1-220ENST00000458038 TPRKBQ9Y3C4 175 aa16.38■□□□□ 0.21
CPNE1-220ENST00000458038 RYR2Q92736 4967 aa16.37■□□□□ 0.21
CPNE1-220ENST00000458038 SHISA3A0PJX4 238 aa16.37■□□□□ 0.21
CPNE1-220ENST00000458038 MSGN1A6NI15 193 aa16.37■□□□□ 0.21
CPNE1-220ENST00000458038 OR9G9P0C7N8 305 aa16.37■□□□□ 0.21
CPNE1-220ENST00000458038 GADD45AP24522 165 aa16.37■□□□□ 0.21
CPNE1-220ENST00000458038 MECP2P51608 486 aaKnown RBP16.37■□□□□ 0.21
CPNE1-220ENST00000458038 UBE2KP61086 200 aa16.37■□□□□ 0.21
CPNE1-220ENST00000458038 LAX1Q8IWV1 398 aa16.37■□□□□ 0.21
CPNE1-220ENST00000458038 ADAD2Q8NCV1 583 aaKnown RBP16.37■□□□□ 0.21
CPNE1-220ENST00000458038 GAR1Q9NY12 217 aaKnown RBP16.37■□□□□ 0.21
CPNE1-220ENST00000458038 RBM7Q9Y580 266 aaKnown RBP16.37■□□□□ 0.21
CPNE1-220ENST00000458038 FAM223BA6NKX1 122 aa16.36■□□□□ 0.21
CPNE1-220ENST00000458038 SRRM4A7MD48 611 aaKnown RBP16.36■□□□□ 0.21
CPNE1-220ENST00000458038 CREBL2O60519 120 aaPredicted RBP16.36■□□□□ 0.21
CPNE1-220ENST00000458038 FCGR3AP08637 254 aa16.36■□□□□ 0.21
CPNE1-220ENST00000458038 HSMCR30P0CW71 290 aa16.36■□□□□ 0.21
CPNE1-220ENST00000458038 CALRP27797 417 aaKnown RBP16.36■□□□□ 0.21
CPNE1-220ENST00000458038 MLLT11Q13015 90 aaPredicted RBP16.36■□□□□ 0.21
CPNE1-220ENST00000458038 PRSS8Q16651 343 aa16.36■□□□□ 0.21
CPNE1-220ENST00000458038 IGSF11Q5DX21 431 aa16.36■□□□□ 0.21
CPNE1-220ENST00000458038 FAM223AQ8IWN6 122 aa16.36■□□□□ 0.21
CPNE1-220ENST00000458038 ACOT13Q9NPJ3 140 aa16.36■□□□□ 0.21
CPNE1-220ENST00000458038 KCNK7Q9Y2U2 307 aa16.36■□□□□ 0.21
CPNE1-220ENST00000458038 GSTT2P0CG29 244 aa16.35■□□□□ 0.21
CPNE1-220ENST00000458038 GSTT2BP0CG30 244 aa16.35■□□□□ 0.21
CPNE1-220ENST00000458038 CLDN12P56749 244 aa16.35■□□□□ 0.21
CPNE1-220ENST00000458038 RPS25P62851 125 aaKnown RBP16.35■□□□□ 0.21
CPNE1-220ENST00000458038 OSR1Q8TAX0 266 aaPredicted RBP16.35■□□□□ 0.21
CPNE1-220ENST00000458038 GINS4Q9BRT9 223 aa16.35■□□□□ 0.21
CPNE1-220ENST00000458038 DUSP21Q9H596 190 aa16.35■□□□□ 0.21
CPNE1-220ENST00000458038 TMEM272A0A1B0GTI8 110 aa16.34■□□□□ 0.21
CPNE1-220ENST00000458038 MPPED1O15442 326 aa16.34■□□□□ 0.21
CPNE1-220ENST00000458038 ACTL6BO94805 426 aa16.34■□□□□ 0.21
CPNE1-220ENST00000458038 TRBV12-3P01733 135 aa16.34■□□□□ 0.21
CPNE1-220ENST00000458038 ATP5G2Q06055 141 aa16.34■□□□□ 0.21
CPNE1-220ENST00000458038 TNXAQ16473 311 aa16.34■□□□□ 0.21
CPNE1-220ENST00000458038 MRGPRG-AS1Q2M3A8 158 aa16.34■□□□□ 0.21
CPNE1-220ENST00000458038 SRSF12Q8WXF0 261 aaKnown RBP16.34■□□□□ 0.21
CPNE1-220ENST00000458038 DDB2Q92466 427 aa16.34■□□□□ 0.21
CPNE1-220ENST00000458038 SPIN2AQ99865 258 aa16.34■□□□□ 0.21
CPNE1-220ENST00000458038 SPIN2BQ9BPZ2 258 aa16.34■□□□□ 0.21
CPNE1-220ENST00000458038 TRBV9A0A0B4J1U6 114 aa16.33■□□□□ 0.2
CPNE1-220ENST00000458038 RGS10O43665 173 aa16.33■□□□□ 0.2
CPNE1-220ENST00000458038 TUSC2O75896 110 aa16.33■□□□□ 0.2
CPNE1-220ENST00000458038 JTBO76095 146 aa16.33■□□□□ 0.2
CPNE1-220ENST00000458038 DUTP33316 252 aaKnown RBP16.33■□□□□ 0.2
CPNE1-220ENST00000458038 RHOGP84095 191 aa16.33■□□□□ 0.2
CPNE1-220ENST00000458038 Q6ZS49 121 aa16.33■□□□□ 0.2
CPNE1-220ENST00000458038 OR10R2Q8NGX6 335 aa16.33■□□□□ 0.2
CPNE1-220ENST00000458038 AKIP1Q9NQ31 210 aa16.33■□□□□ 0.2
CPNE1-220ENST00000458038 SLC2A8Q9NY64 477 aa16.33■□□□□ 0.2
CPNE1-220ENST00000458038 NKX1-2Q9UD57 310 aaPredicted RBP16.33■□□□□ 0.2
CPNE1-220ENST00000458038 CEPT1Q9Y6K0 416 aa16.33■□□□□ 0.2
CPNE1-220ENST00000458038 IZUMO1RA6ND01 250 aa16.32■□□□□ 0.2
CPNE1-220ENST00000458038 PDCD5O14737 125 aa16.32■□□□□ 0.2
CPNE1-220ENST00000458038 TPPPO94811 219 aa16.32■□□□□ 0.2
CPNE1-220ENST00000458038 CRYZL1O95825 349 aa16.32■□□□□ 0.2
CPNE1-220ENST00000458038 RAB6AP20340 208 aa16.32■□□□□ 0.2
CPNE1-220ENST00000458038 ARL6IP1Q15041 203 aa16.32■□□□□ 0.2
CPNE1-220ENST00000458038 LINC00322Q6ZN03 302 aaPredicted RBP16.32■□□□□ 0.2
CPNE1-220ENST00000458038 SLC25A42Q86VD7 318 aa16.32■□□□□ 0.2
CPNE1-220ENST00000458038 NECAP1Q8NC96 275 aa16.32■□□□□ 0.2
CPNE1-220ENST00000458038 KCTD12Q96CX2 325 aaKnown RBP16.32■□□□□ 0.2
CPNE1-220ENST00000458038 STARD9Q9P2P6 4700 aa16.32■□□□□ 0.2
CPNE1-220ENST00000458038 ADAM30Q9UKF2 790 aa16.32■□□□□ 0.2
CPNE1-220ENST00000458038 DNAH1Q9P2D7 4330 aa16.32■□□□□ 0.2
CPNE1-220ENST00000458038 METTL21EPA6NDL7 271 aa16.31■□□□□ 0.2
CPNE1-220ENST00000458038 BMPR1BO00238 502 aa16.31■□□□□ 0.2
CPNE1-220ENST00000458038 APELAP0DMC3 54 aa16.31■□□□□ 0.2
CPNE1-220ENST00000458038 HIST1H1DP16402 221 aaKnown RBP16.31■□□□□ 0.2
CPNE1-220ENST00000458038 TALDO1P37837 337 aa16.31■□□□□ 0.2
CPNE1-220ENST00000458038 FABP5Q01469 135 aa16.31■□□□□ 0.2
CPNE1-220ENST00000458038 DEFA5Q01523 94 aa16.31■□□□□ 0.2
CPNE1-220ENST00000458038 EXOSC2Q13868 293 aaKnown RBP16.31■□□□□ 0.2
CPNE1-220ENST00000458038 SSX1Q16384 188 aa16.31■□□□□ 0.2
CPNE1-220ENST00000458038 ADAMTSL5Q6ZMM2 481 aa16.31■□□□□ 0.2
CPNE1-220ENST00000458038 MMD2Q8IY49 270 aa16.31■□□□□ 0.2
CPNE1-220ENST00000458038 H1FOOQ8IZA3 346 aaPredicted RBP16.31■□□□□ 0.2
CPNE1-220ENST00000458038 ACOT12Q8WYK0 555 aa16.31■□□□□ 0.2
CPNE1-220ENST00000458038 C5orf30Q96GV9 206 aa16.31■□□□□ 0.2
CPNE1-220ENST00000458038 MGLLQ99685 303 aa16.31■□□□□ 0.2
CPNE1-220ENST00000458038 HIPK2Q9H2X6 1198 aa16.31■□□□□ 0.2
CPNE1-220ENST00000458038 ZNF230Q9UIE0 474 aaPredicted RBP16.31■□□□□ 0.2
CPNE1-220ENST00000458038 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP16.3■□□□□ 0.2
CPNE1-220ENST00000458038 TRAV1-2A0A0B4J238 106 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms