RNA–Protein interactions for RNA: ENST00000457942.1

CHCHD3-204, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 4

Gene CHCHD3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-204ENST00000457942 TRDV1A0A1B0GX56 115 aa12.15□□□□□ -0.46
CHCHD3-204ENST00000457942 IFITM5A6NNB3 132 aa12.15□□□□□ -0.46
CHCHD3-204ENST00000457942 SHOXO15266 292 aa12.15□□□□□ -0.46
CHCHD3-204ENST00000457942 HSPB1P04792 205 aaKnown RBP12.15□□□□□ -0.46
CHCHD3-204ENST00000457942 HIST1H1DP16402 221 aaKnown RBP12.15□□□□□ -0.46
CHCHD3-204ENST00000457942 RTL8BQ17RB0 113 aa12.15□□□□□ -0.46
CHCHD3-204ENST00000457942 POC5Q8NA72 575 aa12.15□□□□□ -0.46
CHCHD3-204ENST00000457942 RSRP1Q9BUV0 290 aa12.15□□□□□ -0.46
CHCHD3-204ENST00000457942 KRTAP17-1Q9BYP8 105 aa12.15□□□□□ -0.46
CHCHD3-204ENST00000457942 OR51E2Q9H255 320 aa12.15□□□□□ -0.46
CHCHD3-204ENST00000457942 SDHAF2Q9NX18 166 aa12.15□□□□□ -0.46
CHCHD3-204ENST00000457942 KCNK7Q9Y2U2 307 aa12.15□□□□□ -0.46
CHCHD3-204ENST00000457942 TRBV6-7A0A0A0MS04 114 aa12.14□□□□□ -0.47
CHCHD3-204ENST00000457942 MFNGO00587 321 aa12.14□□□□□ -0.47
CHCHD3-204ENST00000457942 ARPC1BO15143 372 aaKnown RBP12.14□□□□□ -0.47
CHCHD3-204ENST00000457942 SPNP16150 400 aa12.14□□□□□ -0.47
CHCHD3-204ENST00000457942 RAB6AP20340 208 aa12.14□□□□□ -0.47
CHCHD3-204ENST00000457942 LGALS7P47929 136 aa12.14□□□□□ -0.47
CHCHD3-204ENST00000457942 ADAMTSL5Q6ZMM2 481 aa12.14□□□□□ -0.47
CHCHD3-204ENST00000457942 BVESQ8NE79 360 aa12.14□□□□□ -0.47
CHCHD3-204ENST00000457942 OR5T1Q8NG75 326 aa12.14□□□□□ -0.47
CHCHD3-204ENST00000457942 PHB2Q99623 299 aa12.14□□□□□ -0.47
CHCHD3-204ENST00000457942 ELOVL1Q9BW60 279 aa12.14□□□□□ -0.47
CHCHD3-204ENST00000457942 ATG5Q9H1Y0 275 aa12.14□□□□□ -0.47
CHCHD3-204ENST00000457942 RNF167Q9H6Y7 350 aa12.14□□□□□ -0.47
CHCHD3-204ENST00000457942 STUB1Q9UNE7 303 aa12.14□□□□□ -0.47
CHCHD3-204ENST00000457942 LOC100506127A0A0U1RQW1 187 aa12.13□□□□□ -0.47
CHCHD3-204ENST00000457942 GP9P14770 177 aa12.13□□□□□ -0.47
CHCHD3-204ENST00000457942 ACSM6Q6P461 480 aa12.13□□□□□ -0.47
CHCHD3-204ENST00000457942 TSPAN14Q8NG11 270 aa12.13□□□□□ -0.47
CHCHD3-204ENST00000457942 TXNL4BQ9NX01 149 aaKnown RBP12.13□□□□□ -0.47
CHCHD3-204ENST00000457942 COA4Q9NYJ1 87 aa12.13□□□□□ -0.47
CHCHD3-204ENST00000457942 A0A0G2JLM5 398 aa12.12□□□□□ -0.47
CHCHD3-204ENST00000457942 ANKRD34BA5PLL1 514 aa12.12□□□□□ -0.47
CHCHD3-204ENST00000457942 H3BUA1 57 aa12.12□□□□□ -0.47
CHCHD3-204ENST00000457942 J3QRK9 145 aa12.12□□□□□ -0.47
CHCHD3-204ENST00000457942 RAB27BO00194 218 aa12.12□□□□□ -0.47
CHCHD3-204ENST00000457942 MPPED1O15442 326 aa12.12□□□□□ -0.47
CHCHD3-204ENST00000457942 TNFAIP8O95379 198 aa12.12□□□□□ -0.47
CHCHD3-204ENST00000457942 DIRAS3O95661 229 aa12.12□□□□□ -0.47
CHCHD3-204ENST00000457942 IGLV2-23P01705 113 aa12.12□□□□□ -0.47
CHCHD3-204ENST00000457942 APELAP0DMC3 54 aa12.12□□□□□ -0.47
CHCHD3-204ENST00000457942 RRASP10301 218 aa12.12□□□□□ -0.47
CHCHD3-204ENST00000457942 TAGLNQ01995 201 aaKnown RBP12.12□□□□□ -0.47
CHCHD3-204ENST00000457942 PJVKQ0ZLH3 352 aa12.12□□□□□ -0.47
CHCHD3-204ENST00000457942 ARL6IP1Q15041 203 aa12.12□□□□□ -0.47
CHCHD3-204ENST00000457942 SRSF7Q16629 238 aaKnown RBP eCLIP12.12□□□□□ -0.47
CHCHD3-204ENST00000457942 VMA21Q3ZAQ7 101 aa12.12□□□□□ -0.47
CHCHD3-204ENST00000457942 OVCH2Q7RTZ1 564 aa12.12□□□□□ -0.47
CHCHD3-204ENST00000457942 HAPLN4Q86UW8 402 aa12.12□□□□□ -0.47
CHCHD3-204ENST00000457942 NR2C2APQ86WQ0 139 aa12.12□□□□□ -0.47
CHCHD3-204ENST00000457942 SBSPONQ8IVN8 264 aa12.12□□□□□ -0.47
CHCHD3-204ENST00000457942 RHOVQ96L33 236 aa12.12□□□□□ -0.47
CHCHD3-204ENST00000457942 CENPOQ9BU64 300 aa12.12□□□□□ -0.47
CHCHD3-204ENST00000457942 RANGRFQ9HD47 186 aaPredicted RBP12.12□□□□□ -0.47
CHCHD3-204ENST00000457942 SSR3Q9UNL2 185 aa12.12□□□□□ -0.47
CHCHD3-204ENST00000457942 CSMD3Q7Z407 3707 aa12.12□□□□□ -0.47
CHCHD3-204ENST00000457942 HYDINQ4G0P3 5121 aa12.11□□□□□ -0.47
CHCHD3-204ENST00000457942 CRYZL1O95825 349 aa12.11□□□□□ -0.47
CHCHD3-204ENST00000457942 CLEC2LP0C7M8 214 aa12.11□□□□□ -0.47
CHCHD3-204ENST00000457942 CD36P16671 472 aa12.11□□□□□ -0.47
CHCHD3-204ENST00000457942 ZP3P21754 424 aa12.11□□□□□ -0.47
CHCHD3-204ENST00000457942 DEFA5Q01523 94 aa12.11□□□□□ -0.47
CHCHD3-204ENST00000457942 ANKRD13BQ86YJ7 626 aa12.11□□□□□ -0.47
CHCHD3-204ENST00000457942 ACOT12Q8WYK0 555 aa12.11□□□□□ -0.47
CHCHD3-204ENST00000457942 C5orf30Q96GV9 206 aa12.11□□□□□ -0.47
CHCHD3-204ENST00000457942 ADTRPQ96IZ2 230 aa12.11□□□□□ -0.47
CHCHD3-204ENST00000457942 A0A087WXM4 84 aa12.1□□□□□ -0.47
CHCHD3-204ENST00000457942 TGFBR1P36897 503 aa12.1□□□□□ -0.47
CHCHD3-204ENST00000457942 MXD1Q05195 221 aa12.1□□□□□ -0.47
CHCHD3-204ENST00000457942 TNXAQ16473 311 aa12.1□□□□□ -0.47
CHCHD3-204ENST00000457942 TMEM177Q53S58 311 aa12.1□□□□□ -0.47
CHCHD3-204ENST00000457942 H1FOOQ8IZA3 346 aaPredicted RBP12.1□□□□□ -0.47
CHCHD3-204ENST00000457942 TMEM68Q96MH6 324 aa12.1□□□□□ -0.47
CHCHD3-204ENST00000457942 DCUN1D5Q9BTE7 237 aa12.1□□□□□ -0.47
CHCHD3-204ENST00000457942 ST6GALNAC5Q9BVH7 336 aa12.1□□□□□ -0.47
CHCHD3-204ENST00000457942 TRIM64CA6NLI5 447 aa12.09□□□□□ -0.47
CHCHD3-204ENST00000457942 ACTL6BO94805 426 aa12.09□□□□□ -0.47
CHCHD3-204ENST00000457942 CRYGBP07316 175 aa12.09□□□□□ -0.47
CHCHD3-204ENST00000457942 GALP22466 123 aa12.09□□□□□ -0.47
CHCHD3-204ENST00000457942 AADACP22760 399 aa12.09□□□□□ -0.47
CHCHD3-204ENST00000457942 DTYMKP23919 212 aa12.09□□□□□ -0.47
CHCHD3-204ENST00000457942 DUTP33316 252 aaKnown RBP12.09□□□□□ -0.47
CHCHD3-204ENST00000457942 SSBP2P81877 361 aaPredicted RBP12.09□□□□□ -0.47
CHCHD3-204ENST00000457942 CDNFQ49AH0 187 aa12.09□□□□□ -0.47
CHCHD3-204ENST00000457942 IDO2Q6ZQW0 420 aa12.09□□□□□ -0.47
CHCHD3-204ENST00000457942 VCX3AQ9NNX9 186 aa12.09□□□□□ -0.47
CHCHD3-204ENST00000457942 DAPK2Q9UIK4 370 aa12.09□□□□□ -0.47
CHCHD3-204ENST00000457942 ELF5Q9UKW6 265 aaPredicted RBP12.09□□□□□ -0.47
CHCHD3-204ENST00000457942 IGKV1D-8A0A087WSZ0 117 aa12.08□□□□□ -0.48
CHCHD3-204ENST00000457942 SRRM4A7MD48 611 aaKnown RBP12.08□□□□□ -0.48
CHCHD3-204ENST00000457942 NOTOA8MTQ0 251 aa12.08□□□□□ -0.48
CHCHD3-204ENST00000457942 TUSC2O75896 110 aa12.08□□□□□ -0.48
CHCHD3-204ENST00000457942 FRMD6-AS1P0C7T7 363 aa12.08□□□□□ -0.48
CHCHD3-204ENST00000457942 FGF9P31371 208 aaPredicted RBP12.08□□□□□ -0.48
CHCHD3-204ENST00000457942 SDC2P34741 201 aa12.08□□□□□ -0.48
CHCHD3-204ENST00000457942 GNG2P59768 71 aa12.08□□□□□ -0.48
CHCHD3-204ENST00000457942 UBE2KP61086 200 aa12.08□□□□□ -0.48
CHCHD3-204ENST00000457942 LSM3P62310 102 aaKnown RBP12.08□□□□□ -0.48
CHCHD3-204ENST00000457942 KCTD9Q7L273 389 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms