RNA–Protein interactions for RNA: ENST00000453580.1

TNFRSF4-202, Transcript of TNF receptor superfamily member 4, humanhuman

TSL 3

Gene TNFRSF4, Length 393 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4-202ENST00000453580 DAPK2Q9UIK4 370 aa13.23□□□□□ -0.29
TNFRSF4-202ENST00000453580 MRPS7Q9Y2R9 242 aaKnown RBP13.23□□□□□ -0.29
TNFRSF4-202ENST00000453580 PRELID3BQ9Y3B1 194 aa13.23□□□□□ -0.29
TNFRSF4-202ENST00000453580 RRP15Q9Y3B9 282 aaKnown RBP13.23□□□□□ -0.29
TNFRSF4-202ENST00000453580 ETV7Q9Y603 341 aa13.23□□□□□ -0.29
TNFRSF4-202ENST00000453580 A0A0A6YYH2 397 aa13.22□□□□□ -0.29
TNFRSF4-202ENST00000453580 A6NJ64 397 aa13.22□□□□□ -0.29
TNFRSF4-202ENST00000453580 SAP30O75446 220 aa13.22□□□□□ -0.29
TNFRSF4-202ENST00000453580 TIMM50Q3ZCQ8 353 aa13.22□□□□□ -0.29
TNFRSF4-202ENST00000453580 SFXN4Q6P4A7 337 aa13.22□□□□□ -0.29
TNFRSF4-202ENST00000453580 CNIH2Q6PI25 160 aa13.22□□□□□ -0.29
TNFRSF4-202ENST00000453580 ZNF645Q8N7E2 425 aa13.22□□□□□ -0.29
TNFRSF4-202ENST00000453580 MAFIPQ8WZ33 124 aa13.22□□□□□ -0.29
TNFRSF4-202ENST00000453580 RHOVQ96L33 236 aa13.22□□□□□ -0.29
TNFRSF4-202ENST00000453580 MS4A10Q96PG2 267 aa13.22□□□□□ -0.29
TNFRSF4-202ENST00000453580 OR4C12Q96R67 309 aa13.22□□□□□ -0.29
TNFRSF4-202ENST00000453580 RANGRFQ9HD47 186 aaPredicted RBP13.22□□□□□ -0.29
TNFRSF4-202ENST00000453580 OR2W1Q9Y3N9 320 aa13.22□□□□□ -0.29
TNFRSF4-202ENST00000453580 LSM4Q9Y4Z0 139 aaKnown RBP13.22□□□□□ -0.29
TNFRSF4-202ENST00000453580 SORL1Q92673 2214 aa13.21□□□□□ -0.29
TNFRSF4-202ENST00000453580 A0A0B4J203 849 aa13.21□□□□□ -0.29
TNFRSF4-202ENST00000453580 ACTL6BO94805 426 aa13.21□□□□□ -0.29
TNFRSF4-202ENST00000453580 LY86O95711 162 aa13.21□□□□□ -0.29
TNFRSF4-202ENST00000453580 IGLV2-23P01705 113 aa13.21□□□□□ -0.29
TNFRSF4-202ENST00000453580 DUTP33316 252 aaKnown RBP13.21□□□□□ -0.29
TNFRSF4-202ENST00000453580 UBE2KP61086 200 aa13.21□□□□□ -0.29
TNFRSF4-202ENST00000453580 ASPHD1Q5U4P2 390 aa13.21□□□□□ -0.29
TNFRSF4-202ENST00000453580 NR2C2APQ86WQ0 139 aa13.21□□□□□ -0.29
TNFRSF4-202ENST00000453580 CROCCP3Q8IVE0 287 aa13.21□□□□□ -0.29
TNFRSF4-202ENST00000453580 DLX4Q92988 240 aaPredicted RBP13.21□□□□□ -0.29
TNFRSF4-202ENST00000453580 USMG5Q96IX5 58 aa13.21□□□□□ -0.29
TNFRSF4-202ENST00000453580 PHB2Q99623 299 aa13.21□□□□□ -0.29
TNFRSF4-202ENST00000453580 CRYGBP07316 175 aa13.2□□□□□ -0.3
TNFRSF4-202ENST00000453580 ACSM6Q6P461 480 aa13.2□□□□□ -0.3
TNFRSF4-202ENST00000453580 WWC2-AS2Q96NR7 200 aa13.2□□□□□ -0.3
TNFRSF4-202ENST00000453580 PRR25Q96S07 402 aa13.2□□□□□ -0.3
TNFRSF4-202ENST00000453580 HSD17B10Q99714 261 aaKnown RBP13.2□□□□□ -0.3
TNFRSF4-202ENST00000453580 VCX3AQ9NNX9 186 aa13.2□□□□□ -0.3
TNFRSF4-202ENST00000453580 DIABLOQ9NR28 239 aa13.2□□□□□ -0.3
TNFRSF4-202ENST00000453580 TPSG1Q9NRR2 321 aa13.2□□□□□ -0.3
TNFRSF4-202ENST00000453580 RHBDL2Q9NX52 303 aa13.2□□□□□ -0.3
TNFRSF4-202ENST00000453580 SMAD5-AS1Q9Y6J3 95 aa13.2□□□□□ -0.3
TNFRSF4-202ENST00000453580 IGHV4OR15-8A0A075B7B6 117 aa13.19□□□□□ -0.3
TNFRSF4-202ENST00000453580 A0A087WW49 117 aa13.19□□□□□ -0.3
TNFRSF4-202ENST00000453580 CRYZL1O95825 349 aa13.19□□□□□ -0.3
TNFRSF4-202ENST00000453580 IGHV3-11P01762 117 aa13.19□□□□□ -0.3
TNFRSF4-202ENST00000453580 HLA-DQB1P01920 261 aa13.19□□□□□ -0.3
TNFRSF4-202ENST00000453580 SDC2P34741 201 aa13.19□□□□□ -0.3
TNFRSF4-202ENST00000453580 LINC00205P59089 165 aa13.19□□□□□ -0.3
TNFRSF4-202ENST00000453580 TATDN3Q17R31 274 aa13.19□□□□□ -0.3
TNFRSF4-202ENST00000453580 KCTD21Q4G0X4 260 aa13.19□□□□□ -0.3
TNFRSF4-202ENST00000453580 FAM209BQ5JX69 171 aa13.19□□□□□ -0.3
TNFRSF4-202ENST00000453580 OR5T1Q8NG75 326 aa13.19□□□□□ -0.3
TNFRSF4-202ENST00000453580 VSTM2AQ8TAG5 236 aa13.19□□□□□ -0.3
TNFRSF4-202ENST00000453580 LGALS14Q8TCE9 139 aa13.19□□□□□ -0.3
TNFRSF4-202ENST00000453580 DDB2Q92466 427 aa13.19□□□□□ -0.3
TNFRSF4-202ENST00000453580 AIFM2Q9BRQ8 373 aa13.19□□□□□ -0.3
TNFRSF4-202ENST00000453580 DCUN1D5Q9BTE7 237 aa13.19□□□□□ -0.3
TNFRSF4-202ENST00000453580 ALX4Q9H161 411 aaPredicted RBP13.19□□□□□ -0.3
TNFRSF4-202ENST00000453580 ANXA10Q9UJ72 324 aa13.19□□□□□ -0.3
TNFRSF4-202ENST00000453580 SMIM30A4D0T7 59 aa13.18□□□□□ -0.3
TNFRSF4-202ENST00000453580 TMEM235A6NFC5 223 aa13.18□□□□□ -0.3
TNFRSF4-202ENST00000453580 MPPED1O15442 326 aa13.18□□□□□ -0.3
TNFRSF4-202ENST00000453580 SNRPBP14678 240 aaKnown RBP13.18□□□□□ -0.3
TNFRSF4-202ENST00000453580 SLURP1P55000 103 aa13.18□□□□□ -0.3
TNFRSF4-202ENST00000453580 ARPC4P59998 168 aa13.18□□□□□ -0.3
TNFRSF4-202ENST00000453580 PRSS8Q16651 343 aa13.18□□□□□ -0.3
TNFRSF4-202ENST00000453580 KCTD9Q7L273 389 aa13.18□□□□□ -0.3
TNFRSF4-202ENST00000453580 MMD2Q8IY49 270 aa13.18□□□□□ -0.3
TNFRSF4-202ENST00000453580 CASTOR1Q8WTX7 329 aa13.18□□□□□ -0.3
TNFRSF4-202ENST00000453580 SPIN2AQ99865 258 aa13.18□□□□□ -0.3
TNFRSF4-202ENST00000453580 SPIN2BQ9BPZ2 258 aa13.18□□□□□ -0.3
TNFRSF4-202ENST00000453580 TINAGL1Q9GZM7 467 aaPredicted RBP13.18□□□□□ -0.3
TNFRSF4-202ENST00000453580 OR51E2Q9H255 320 aa13.18□□□□□ -0.3
TNFRSF4-202ENST00000453580 RBMX2Q9Y388 322 aaKnown RBP13.18□□□□□ -0.3
TNFRSF4-202ENST00000453580 LOC100506127A0A0U1RQW1 187 aa13.17□□□□□ -0.3
TNFRSF4-202ENST00000453580 CBX5P45973 191 aa13.17□□□□□ -0.3
TNFRSF4-202ENST00000453580 MXD1Q05195 221 aa13.17□□□□□ -0.3
TNFRSF4-202ENST00000453580 CDK10Q15131 360 aa13.17□□□□□ -0.3
TNFRSF4-202ENST00000453580 MSMO1Q15800 293 aa13.17□□□□□ -0.3
TNFRSF4-202ENST00000453580 TNXAQ16473 311 aa13.17□□□□□ -0.3
TNFRSF4-202ENST00000453580 IDNKQ5T6J7 187 aa13.17□□□□□ -0.3
TNFRSF4-202ENST00000453580 OVCH2Q7RTZ1 564 aa13.17□□□□□ -0.3
TNFRSF4-202ENST00000453580 SLC25A42Q86VD7 318 aa13.17□□□□□ -0.3
TNFRSF4-202ENST00000453580 OR4S2Q8NH73 311 aa13.17□□□□□ -0.3
TNFRSF4-202ENST00000453580 NUDCD2Q8WVJ2 157 aa13.17□□□□□ -0.3
TNFRSF4-202ENST00000453580 BORCS5Q969J3 196 aa13.17□□□□□ -0.3
TNFRSF4-202ENST00000453580 COA4Q9NYJ1 87 aa13.17□□□□□ -0.3
TNFRSF4-202ENST00000453580 U3KQK5 164 aa13.17□□□□□ -0.3
TNFRSF4-202ENST00000453580 IGKV1D-8A0A087WSZ0 117 aa13.16□□□□□ -0.3
TNFRSF4-202ENST00000453580 MSGN1A6NI15 193 aa13.16□□□□□ -0.3
TNFRSF4-202ENST00000453580 SRRM4A7MD48 611 aaKnown RBP13.16□□□□□ -0.3
TNFRSF4-202ENST00000453580 FCGR3BO75015 233 aa13.16□□□□□ -0.3
TNFRSF4-202ENST00000453580 OR9G9P0C7N8 305 aa13.16□□□□□ -0.3
TNFRSF4-202ENST00000453580 NFYAP23511 347 aaPredicted RBP13.16□□□□□ -0.3
TNFRSF4-202ENST00000453580 KIR2DS2P43631 304 aa13.16□□□□□ -0.3
TNFRSF4-202ENST00000453580 PJVKQ0ZLH3 352 aa13.16□□□□□ -0.3
TNFRSF4-202ENST00000453580 NEDD8Q15843 81 aa13.16□□□□□ -0.3
TNFRSF4-202ENST00000453580 C11orf87Q6NUJ2 197 aa13.16□□□□□ -0.3
TNFRSF4-202ENST00000453580 ZNF66Q6ZN08 573 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms