RNA–Protein interactions for RNA: ENST00000449307.3

AC006001.3-201, humanhuman

TSL 3 BASIC

Gene AC006001.3, Length 7,092 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC006001.3-201ENST00000449307 COTL1Q14019 142 aa10.89□□□□□ -0.67
AC006001.3-201ENST00000449307 LINC00469Q8N7U9 141 aa10.89□□□□□ -0.67
AC006001.3-201ENST00000449307 AKIRIN1Q9H9L7 192 aaPredicted RBP10.89□□□□□ -0.67
AC006001.3-201ENST00000449307 ZNF815PA8K554 130 aa10.89□□□□□ -0.67
AC006001.3-201ENST00000449307 ASAH2BP0C7U1 165 aa10.89□□□□□ -0.67
AC006001.3-201ENST00000449307 HINT1P49773 126 aaPredicted RBP10.89□□□□□ -0.67
AC006001.3-201ENST00000449307 ZNF880Q6PDB4 577 aa10.89□□□□□ -0.67
AC006001.3-201ENST00000449307 C10orf111Q8N326 155 aa10.89□□□□□ -0.67
AC006001.3-201ENST00000449307 OPN4Q9UHM6 478 aa10.89□□□□□ -0.67
AC006001.3-201ENST00000449307 TDGF1P13385 188 aa10.89□□□□□ -0.67
AC006001.3-201ENST00000449307 RHOVQ96L33 236 aa10.89□□□□□ -0.67
AC006001.3-201ENST00000449307 TAF1LQ8IZX4 1826 aa10.89□□□□□ -0.67
AC006001.3-201ENST00000449307 SCGB1A1P11684 91 aa10.89□□□□□ -0.67
AC006001.3-201ENST00000449307 RNASE4P34096 147 aaKnown RBP10.89□□□□□ -0.67
AC006001.3-201ENST00000449307 NMUP48645 174 aa10.89□□□□□ -0.67
AC006001.3-201ENST00000449307 BSXQ3C1V8 233 aa10.89□□□□□ -0.67
AC006001.3-201ENST00000449307 MYOFQ9NZM1 2061 aa10.89□□□□□ -0.67
AC006001.3-201ENST00000449307 PSCAO43653 123 aa10.88□□□□□ -0.67
AC006001.3-201ENST00000449307 LSM10Q969L4 123 aaKnown RBP10.88□□□□□ -0.67
AC006001.3-201ENST00000449307 ANAPC16Q96DE5 110 aa10.88□□□□□ -0.67
AC006001.3-201ENST00000449307 GPHA2Q96T91 129 aa10.88□□□□□ -0.67
AC006001.3-201ENST00000449307 TNFRSF18Q9Y5U5 241 aa10.88□□□□□ -0.67
AC006001.3-201ENST00000449307 NUP214P35658 2090 aaPredicted RBP10.88□□□□□ -0.67
AC006001.3-201ENST00000449307 PGLYRP4Q96LB8 373 aa10.88□□□□□ -0.67
AC006001.3-201ENST00000449307 WNT5BQ9H1J7 359 aa10.88□□□□□ -0.67
AC006001.3-201ENST00000449307 SELENOKQ9Y6D0 94 aa10.88□□□□□ -0.67
AC006001.3-201ENST00000449307 FUCA1P04066 466 aa10.88□□□□□ -0.67
AC006001.3-201ENST00000449307 GCSAMLQ5JQS6 135 aa10.88□□□□□ -0.67
AC006001.3-201ENST00000449307 ARPC1AQ92747 370 aa10.88□□□□□ -0.67
AC006001.3-201ENST00000449307 CD99P14209 185 aa10.88□□□□□ -0.67
AC006001.3-201ENST00000449307 GALP22466 123 aa10.88□□□□□ -0.67
AC006001.3-201ENST00000449307 MFAP2P55001 183 aa10.88□□□□□ -0.67
AC006001.3-201ENST00000449307 TOLLIPQ9H0E2 274 aa10.88□□□□□ -0.67
AC006001.3-201ENST00000449307 VAX2Q9UIW0 290 aa10.88□□□□□ -0.67
AC006001.3-201ENST00000449307 MOSP00540 346 aa10.88□□□□□ -0.67
AC006001.3-201ENST00000449307 SURF2Q15527 256 aaPredicted RBP10.88□□□□□ -0.67
AC006001.3-201ENST00000449307 TMEM191AQ9H0A3 160 aa10.88□□□□□ -0.67
AC006001.3-201ENST00000449307 AKIP1Q9NQ31 210 aa10.88□□□□□ -0.67
AC006001.3-201ENST00000449307 ELOBQ15370 118 aa10.87□□□□□ -0.67
AC006001.3-201ENST00000449307 FAM209BQ5JX69 171 aa10.87□□□□□ -0.67
AC006001.3-201ENST00000449307 ZIC4Q8N9L1 334 aa10.87□□□□□ -0.67
AC006001.3-201ENST00000449307 OR13A1Q8NGR1 328 aa10.87□□□□□ -0.67
AC006001.3-201ENST00000449307 MAP1BP46821 2468 aaKnown RBP10.87□□□□□ -0.67
AC006001.3-201ENST00000449307 IGHV1-2P23083 117 aa10.87□□□□□ -0.67
AC006001.3-201ENST00000449307 FGF9P31371 208 aaPredicted RBP10.87□□□□□ -0.67
AC006001.3-201ENST00000449307 RFLNBQ8N5W9 214 aa10.87□□□□□ -0.67
AC006001.3-201ENST00000449307 PLXNA1Q9UIW2 1896 aa10.87□□□□□ -0.67
AC006001.3-201ENST00000449307 SRD5A1P18405 259 aa10.87□□□□□ -0.67
AC006001.3-201ENST00000449307 CRYBA2P53672 197 aa10.87□□□□□ -0.67
AC006001.3-201ENST00000449307 TCTEX1D1Q8N7M0 179 aa10.87□□□□□ -0.67
AC006001.3-201ENST00000449307 GLMPQ8WWB7 406 aa10.87□□□□□ -0.67
AC006001.3-201ENST00000449307 FOXA2Q9Y261 457 aaPredicted RBP10.87□□□□□ -0.67
AC006001.3-201ENST00000449307 TPRP12270 2363 aaKnown RBP10.87□□□□□ -0.67
AC006001.3-201ENST00000449307 OTOFQ9HC10 1997 aa10.87□□□□□ -0.67
AC006001.3-201ENST00000449307 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.87□□□□□ -0.67
AC006001.3-201ENST00000449307 CD24P25063 80 aa10.87□□□□□ -0.67
AC006001.3-201ENST00000449307 PKIBQ9C010 78 aa10.87□□□□□ -0.67
AC006001.3-201ENST00000449307 JPT1Q9UK76 154 aa10.87□□□□□ -0.67
AC006001.3-201ENST00000449307 CD1AP06126 327 aa10.87□□□□□ -0.67
AC006001.3-201ENST00000449307 RCC1P18754 421 aaPredicted RBP10.87□□□□□ -0.67
AC006001.3-201ENST00000449307 EFNB2P52799 333 aa10.87□□□□□ -0.67
AC006001.3-201ENST00000449307 CIRBPQ14011 172 aaKnown RBP10.87□□□□□ -0.67
AC006001.3-201ENST00000449307 TRAV20A0A0B4J274 112 aa10.87□□□□□ -0.67
AC006001.3-201ENST00000449307 IGHV2OR16-5A0A0B4J2B6 119 aa10.87□□□□□ -0.67
AC006001.3-201ENST00000449307 HMGA2P52926 109 aa10.87□□□□□ -0.67
AC006001.3-201ENST00000449307 FAM216BQ8N7L0 139 aa10.87□□□□□ -0.67
AC006001.3-201ENST00000449307 LMX1BO60663 402 aa10.86□□□□□ -0.67
AC006001.3-201ENST00000449307 CRPP02741 224 aa10.86□□□□□ -0.67
AC006001.3-201ENST00000449307 LGALS3P17931 250 aaKnown RBP10.86□□□□□ -0.67
AC006001.3-201ENST00000449307 DSCR9P59020 149 aa10.86□□□□□ -0.67
AC006001.3-201ENST00000449307 CYB5R1Q9UHQ9 305 aa10.86□□□□□ -0.67
AC006001.3-201ENST00000449307 MMP16P51512 607 aa10.86□□□□□ -0.67
AC006001.3-201ENST00000449307 TMEM183BQ1AE95 376 aa10.86□□□□□ -0.67
AC006001.3-201ENST00000449307 RPL39P5Q59GN2 51 aa10.86□□□□□ -0.67
AC006001.3-201ENST00000449307 SP5Q6BEB4 398 aaPredicted RBP10.86□□□□□ -0.67
AC006001.3-201ENST00000449307 ZCCHC24Q8N2G6 241 aaKnown RBP10.86□□□□□ -0.67
AC006001.3-201ENST00000449307 TOMM7Q9P0U1 55 aa10.86□□□□□ -0.67
AC006001.3-201ENST00000449307 CKAP5Q14008 2032 aa10.86□□□□□ -0.67
AC006001.3-201ENST00000449307 KIF13BQ9NQT8 1826 aa10.86□□□□□ -0.67
AC006001.3-201ENST00000449307 KBTBD11O94819 623 aa10.86□□□□□ -0.67
AC006001.3-201ENST00000449307 MUC1P15941 1255 aaPredicted RBP10.86□□□□□ -0.67
AC006001.3-201ENST00000449307 FAM24BQ8N5W8 94 aa10.86□□□□□ -0.67
AC006001.3-201ENST00000449307 PIKFYVEQ9Y2I7 2098 aa10.86□□□□□ -0.67
AC006001.3-201ENST00000449307 CD74P04233 296 aa10.86□□□□□ -0.67
AC006001.3-201ENST00000449307 PGA5P0DJD9 388 aa10.86□□□□□ -0.67
AC006001.3-201ENST00000449307 COMPP49747 757 aaPredicted RBP10.86□□□□□ -0.67
AC006001.3-201ENST00000449307 SSC4DQ8WTU2 575 aa10.86□□□□□ -0.67
AC006001.3-201ENST00000449307 PDCD11Q14690 1871 aaKnown RBP10.86□□□□□ -0.67
AC006001.3-201ENST00000449307 PTGDSP41222 190 aa10.86□□□□□ -0.67
AC006001.3-201ENST00000449307 SELENOTP62341 195 aa10.86□□□□□ -0.67
AC006001.3-201ENST00000449307 COL4A5P29400 1685 aa10.85□□□□□ -0.67
AC006001.3-201ENST00000449307 E9PLN8 166 aa10.85□□□□□ -0.67
AC006001.3-201ENST00000449307 NPBWR2P48146 333 aa10.85□□□□□ -0.67
AC006001.3-201ENST00000449307 VKORC1Q9BQB6 163 aa10.85□□□□□ -0.67
AC006001.3-201ENST00000449307 NEU3Q9UQ49 428 aa10.85□□□□□ -0.67
AC006001.3-201ENST00000449307 A0A1W2PP11 408 aa10.85□□□□□ -0.67
AC006001.3-201ENST00000449307 MIC13Q5XKP0 118 aa10.85□□□□□ -0.67
AC006001.3-201ENST00000449307 AQP10Q96PS8 301 aa10.85□□□□□ -0.67
AC006001.3-201ENST00000449307 CHRNA10Q9GZZ6 450 aa10.85□□□□□ -0.67
AC006001.3-201ENST00000449307 THADAQ6YHU6 1953 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms