RNA–Protein interactions for RNA: ENST00000432588.5

ACTB-205, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 568 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-205ENST00000432588 CITED4Q96RK1 184 aa12.39□□□□□ -0.43
ACTB-205ENST00000432588 COA4Q9NYJ1 87 aa12.39□□□□□ -0.43
ACTB-205ENST00000432588 PEF1Q9UBV8 284 aaKnown RBP12.39□□□□□ -0.43
ACTB-205ENST00000432588 KCNK7Q9Y2U2 307 aa12.39□□□□□ -0.43
ACTB-205ENST00000432588 METTL21EPA6NDL7 271 aa12.38□□□□□ -0.43
ACTB-205ENST00000432588 A8MZ25 164 aa12.38□□□□□ -0.43
ACTB-205ENST00000432588 CRHBPP24387 322 aa12.38□□□□□ -0.43
ACTB-205ENST00000432588 SYNJ2BPP57105 145 aa12.38□□□□□ -0.43
ACTB-205ENST00000432588 PLA2G7Q13093 441 aa12.38□□□□□ -0.43
ACTB-205ENST00000432588 VMA21Q3ZAQ7 101 aa12.38□□□□□ -0.43
ACTB-205ENST00000432588 ZNF343Q6P1L6 599 aa12.38□□□□□ -0.43
ACTB-205ENST00000432588 NKX1-2Q9UD57 310 aaPredicted RBP12.38□□□□□ -0.43
ACTB-205ENST00000432588 A0A075B6Q4 140 aa12.37□□□□□ -0.43
ACTB-205ENST00000432588 TRAV1-2A0A0B4J238 106 aa12.37□□□□□ -0.43
ACTB-205ENST00000432588 MSGN1A6NI15 193 aa12.37□□□□□ -0.43
ACTB-205ENST00000432588 HIST1H1DP16402 221 aaKnown RBP12.37□□□□□ -0.43
ACTB-205ENST00000432588 GNB3P16520 340 aa12.37□□□□□ -0.43
ACTB-205ENST00000432588 RAB6AP20340 208 aa12.37□□□□□ -0.43
ACTB-205ENST00000432588 MYL9P24844 172 aa12.37□□□□□ -0.43
ACTB-205ENST00000432588 RPEL1Q2QD12 228 aa12.37□□□□□ -0.43
ACTB-205ENST00000432588 GTSCR1Q86UQ5 136 aa12.37□□□□□ -0.43
ACTB-205ENST00000432588 TEX45Q8NA69 505 aa12.37□□□□□ -0.43
ACTB-205ENST00000432588 C19orf73Q9NVV2 129 aa12.37□□□□□ -0.43
ACTB-205ENST00000432588 ZNF230Q9UIE0 474 aaPredicted RBP12.37□□□□□ -0.43
ACTB-205ENST00000432588 A0A0B4J203 849 aa12.36□□□□□ -0.43
ACTB-205ENST00000432588 IFITM5A6NNB3 132 aa12.36□□□□□ -0.43
ACTB-205ENST00000432588 SRRM4A7MD48 611 aaKnown RBP12.36□□□□□ -0.43
ACTB-205ENST00000432588 ANKRD65E5RJM6 399 aa12.36□□□□□ -0.43
ACTB-205ENST00000432588 MFNGO00587 321 aa12.36□□□□□ -0.43
ACTB-205ENST00000432588 MPPED1O15442 326 aa12.36□□□□□ -0.43
ACTB-205ENST00000432588 CREBL2O60519 120 aaPredicted RBP12.36□□□□□ -0.43
ACTB-205ENST00000432588 OR9G9P0C7N8 305 aa12.36□□□□□ -0.43
ACTB-205ENST00000432588 MAP2K4P45985 399 aa12.36□□□□□ -0.43
ACTB-205ENST00000432588 UBE2KP61086 200 aa12.36□□□□□ -0.43
ACTB-205ENST00000432588 ARFRP1Q13795 201 aa12.36□□□□□ -0.43
ACTB-205ENST00000432588 ARL6IP1Q15041 203 aa12.36□□□□□ -0.43
ACTB-205ENST00000432588 PRSS8Q16651 343 aa12.36□□□□□ -0.43
ACTB-205ENST00000432588 LCN12Q6JVE5 192 aa12.36□□□□□ -0.43
ACTB-205ENST00000432588 ZNF367Q7RTV3 350 aa12.36□□□□□ -0.43
ACTB-205ENST00000432588 OSR1Q8TAX0 266 aaPredicted RBP12.36□□□□□ -0.43
ACTB-205ENST00000432588 MAFIPQ8WZ33 124 aa12.36□□□□□ -0.43
ACTB-205ENST00000432588 SNAPC3Q92966 411 aa12.36□□□□□ -0.43
ACTB-205ENST00000432588 ISOC1Q96CN7 298 aa12.36□□□□□ -0.43
ACTB-205ENST00000432588 VCX3BQ9H321 246 aa12.36□□□□□ -0.43
ACTB-205ENST00000432588 BLOC1S6Q9UL45 172 aa12.36□□□□□ -0.43
ACTB-205ENST00000432588 TENM2Q9NT68 2774 aa12.35□□□□□ -0.43
ACTB-205ENST00000432588 RAB27BO00194 218 aa12.35□□□□□ -0.43
ACTB-205ENST00000432588 ACTL6BO94805 426 aa12.35□□□□□ -0.43
ACTB-205ENST00000432588 OR2A4O95047 310 aa12.35□□□□□ -0.43
ACTB-205ENST00000432588 CRYZL1O95825 349 aa12.35□□□□□ -0.43
ACTB-205ENST00000432588 APELAP0DMC3 54 aa12.35□□□□□ -0.43
ACTB-205ENST00000432588 DUTP33316 252 aaKnown RBP12.35□□□□□ -0.43
ACTB-205ENST00000432588 OR10A3P58181 314 aa12.35□□□□□ -0.43
ACTB-205ENST00000432588 DYRK1AQ13627 763 aa12.35□□□□□ -0.43
ACTB-205ENST00000432588 TBCEQ15813 527 aaPredicted RBP12.35□□□□□ -0.43
ACTB-205ENST00000432588 TNXAQ16473 311 aa12.35□□□□□ -0.43
ACTB-205ENST00000432588 IL34Q6ZMJ4 242 aa12.35□□□□□ -0.43
ACTB-205ENST00000432588 Q6ZS49 121 aa12.35□□□□□ -0.43
ACTB-205ENST00000432588 Q8N402 240 aa12.35□□□□□ -0.43
ACTB-205ENST00000432588 ADAD2Q8NCV1 583 aaKnown RBP12.35□□□□□ -0.43
ACTB-205ENST00000432588 NRG4Q8WWG1 115 aa12.35□□□□□ -0.43
ACTB-205ENST00000432588 ACOT12Q8WYK0 555 aa12.35□□□□□ -0.43
ACTB-205ENST00000432588 SPATA25Q9BR10 227 aa12.35□□□□□ -0.43
ACTB-205ENST00000432588 TUBA4BQ9H853 241 aa12.35□□□□□ -0.43
ACTB-205ENST00000432588 SIGLEC8Q9NYZ4 499 aa12.35□□□□□ -0.43
ACTB-205ENST00000432588 PEMTQ9UBM1 199 aa12.35□□□□□ -0.43
ACTB-205ENST00000432588 DYNC2H1Q8NCM8 4307 aaKnown RBP12.34□□□□□ -0.43
ACTB-205ENST00000432588 FAM223BA6NKX1 122 aa12.34□□□□□ -0.43
ACTB-205ENST00000432588 RAB3BP20337 219 aa12.34□□□□□ -0.43
ACTB-205ENST00000432588 DEFA5Q01523 94 aa12.34□□□□□ -0.43
ACTB-205ENST00000432588 IDO2Q6ZQW0 420 aa12.34□□□□□ -0.43
ACTB-205ENST00000432588 FAM223AQ8IWN6 122 aa12.34□□□□□ -0.43
ACTB-205ENST00000432588 H1FOOQ8IZA3 346 aaPredicted RBP12.34□□□□□ -0.43
ACTB-205ENST00000432588 SRSF12Q8WXF0 261 aaKnown RBP12.34□□□□□ -0.43
ACTB-205ENST00000432588 DDB2Q92466 427 aa12.34□□□□□ -0.43
ACTB-205ENST00000432588 C5orf30Q96GV9 206 aa12.34□□□□□ -0.43
ACTB-205ENST00000432588 SPIN2AQ99865 258 aa12.34□□□□□ -0.43
ACTB-205ENST00000432588 SPIN2BQ9BPZ2 258 aa12.34□□□□□ -0.43
ACTB-205ENST00000432588 AIREO43918 545 aa12.33□□□□□ -0.44
ACTB-205ENST00000432588 TRBV12-3P01733 135 aa12.33□□□□□ -0.44
ACTB-205ENST00000432588 CSN3P07498 182 aa12.33□□□□□ -0.44
ACTB-205ENST00000432588 DTYMKP23919 212 aa12.33□□□□□ -0.44
ACTB-205ENST00000432588 HSPA13P48723 471 aa12.33□□□□□ -0.44
ACTB-205ENST00000432588 RHOGP84095 191 aa12.33□□□□□ -0.44
ACTB-205ENST00000432588 SSX1Q16384 188 aa12.33□□□□□ -0.44
ACTB-205ENST00000432588 MRGPRG-AS1Q2M3A8 158 aa12.33□□□□□ -0.44
ACTB-205ENST00000432588 DCUN1D5Q9BTE7 237 aa12.33□□□□□ -0.44
ACTB-205ENST00000432588 ATG5Q9H1Y0 275 aa12.33□□□□□ -0.44
ACTB-205ENST00000432588 NDUFB11Q9NX14 153 aa12.33□□□□□ -0.44
ACTB-205ENST00000432588 PRELID3BQ9Y3B1 194 aa12.33□□□□□ -0.44
ACTB-205ENST00000432588 LINC00473A8K010 186 aa12.32□□□□□ -0.44
ACTB-205ENST00000432588 TUSC2O75896 110 aa12.32□□□□□ -0.44
ACTB-205ENST00000432588 SLC22A5O76082 557 aa12.32□□□□□ -0.44
ACTB-205ENST00000432588 IFNA6P05013 189 aa12.32□□□□□ -0.44
ACTB-205ENST00000432588 CTXN2P0C2S0 81 aa12.32□□□□□ -0.44
ACTB-205ENST00000432588 GALP22466 123 aa12.32□□□□□ -0.44
ACTB-205ENST00000432588 ATP5G2Q06055 141 aa12.32□□□□□ -0.44
ACTB-205ENST00000432588 EXOSC2Q13868 293 aaKnown RBP12.32□□□□□ -0.44
ACTB-205ENST00000432588 CDK10Q15131 360 aa12.32□□□□□ -0.44
ACTB-205ENST00000432588 FAM209BQ5JX69 171 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms