RNA–Protein interactions for RNA: ENST00000431918.1

CLDN4-202, Transcript of claudin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLDN4, Length 4,108 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-202ENST00000431918 J3QW42 95 aa9.59□□□□□ -0.87
CLDN4-202ENST00000431918 IGHG3P01860 377 aa9.59□□□□□ -0.87
CLDN4-202ENST00000431918 GYPAP02724 150 aa9.59□□□□□ -0.87
CLDN4-202ENST00000431918 RPL29P47914 159 aaKnown RBP9.59□□□□□ -0.87
CLDN4-202ENST00000431918 COMMD1Q8N668 190 aa9.59□□□□□ -0.87
CLDN4-202ENST00000431918 ZNF645Q8N7E2 425 aa9.59□□□□□ -0.87
CLDN4-202ENST00000431918 RAB24Q969Q5 203 aa9.59□□□□□ -0.87
CLDN4-202ENST00000431918 FREM2Q5SZK8 3169 aa9.59□□□□□ -0.87
CLDN4-202ENST00000431918 UBE2G2P60604 165 aa9.58□□□□□ -0.88
CLDN4-202ENST00000431918 IL15RAQ13261 267 aa9.58□□□□□ -0.88
CLDN4-202ENST00000431918 PIP4P1Q86T03 277 aa9.58□□□□□ -0.88
CLDN4-202ENST00000431918 ZNF429Q86V71 674 aa9.58□□□□□ -0.88
CLDN4-202ENST00000431918 OR4C12Q96R67 309 aa9.58□□□□□ -0.88
CLDN4-202ENST00000431918 GINS3Q9BRX5 216 aa9.58□□□□□ -0.88
CLDN4-202ENST00000431918 CACNA1BQ00975 2339 aa9.58□□□□□ -0.88
CLDN4-202ENST00000431918 MAP1LC3B2A6NCE7 125 aa9.58□□□□□ -0.88
CLDN4-202ENST00000431918 ENSAO43768 121 aaKnown RBP9.58□□□□□ -0.88
CLDN4-202ENST00000431918 ZG16O60844 167 aa9.58□□□□□ -0.88
CLDN4-202ENST00000431918 LYL1P12980 280 aa9.58□□□□□ -0.88
CLDN4-202ENST00000431918 GZMHP20718 246 aa9.58□□□□□ -0.88
CLDN4-202ENST00000431918 TAS2R30P59541 319 aa9.58□□□□□ -0.88
CLDN4-202ENST00000431918 Q6ZRM9 215 aa9.58□□□□□ -0.88
CLDN4-202ENST00000431918 TMEM171Q8WVE6 324 aa9.58□□□□□ -0.88
CLDN4-202ENST00000431918 ZDHHC16Q969W1 377 aa9.58□□□□□ -0.88
CLDN4-202ENST00000431918 MAP1LC3BQ9GZQ8 125 aa9.58□□□□□ -0.88
CLDN4-202ENST00000431918 RBKSQ9H477 322 aa9.58□□□□□ -0.88
CLDN4-202ENST00000431918 ZNF665Q9H7R5 613 aa9.58□□□□□ -0.88
CLDN4-202ENST00000431918 RAB9BQ9NP90 201 aa9.58□□□□□ -0.88
CLDN4-202ENST00000431918 NKX6-3A6NJ46 265 aa9.58□□□□□ -0.88
CLDN4-202ENST00000431918 ZNF727A8MUV8 499 aa9.58□□□□□ -0.88
CLDN4-202ENST00000431918 SCAF4O95104 1147 aaKnown RBP9.58□□□□□ -0.88
CLDN4-202ENST00000431918 FFAR4Q5NUL3 377 aa9.58□□□□□ -0.88
CLDN4-202ENST00000431918 BTNL8Q6UX41 500 aa9.58□□□□□ -0.88
CLDN4-202ENST00000431918 RNF7Q9UBF6 113 aa9.58□□□□□ -0.88
CLDN4-202ENST00000431918 FAM90A27PA6NNH2 459 aa9.58□□□□□ -0.88
CLDN4-202ENST00000431918 C16orf97H3BN30 126 aa9.58□□□□□ -0.88
CLDN4-202ENST00000431918 CCL20P78556 96 aa9.58□□□□□ -0.88
CLDN4-202ENST00000431918 ID3Q02535 119 aa9.58□□□□□ -0.88
CLDN4-202ENST00000431918 MST1LQ2TV78 715 aa9.58□□□□□ -0.88
CLDN4-202ENST00000431918 CYB561D1Q8N8Q1 229 aa9.58□□□□□ -0.88
CLDN4-202ENST00000431918 NECAP1Q8NC96 275 aa9.58□□□□□ -0.88
CLDN4-202ENST00000431918 EGLN1Q9GZT9 426 aa9.58□□□□□ -0.88
CLDN4-202ENST00000431918 MUC3AQ02505 3323 aa9.58□□□□□ -0.88
CLDN4-202ENST00000431918 RPL39P5Q59GN2 51 aa9.57□□□□□ -0.88
CLDN4-202ENST00000431918 NMSQ5H8A3 153 aa9.57□□□□□ -0.88
CLDN4-202ENST00000431918 OR4F5Q8NH21 305 aa9.57□□□□□ -0.88
CLDN4-202ENST00000431918 RND1Q92730 232 aa9.57□□□□□ -0.88
CLDN4-202ENST00000431918 OR4F4Q96R69 305 aa9.57□□□□□ -0.88
CLDN4-202ENST00000431918 PRDM13Q9H4Q3 707 aa9.57□□□□□ -0.88
CLDN4-202ENST00000431918 LAMP3Q9UQV4 416 aa9.57□□□□□ -0.88
CLDN4-202ENST00000431918 C9JQL5 133 aa9.57□□□□□ -0.88
CLDN4-202ENST00000431918 MGST3O14880 152 aa9.57□□□□□ -0.88
CLDN4-202ENST00000431918 TMEM50AO95807 157 aa9.57□□□□□ -0.88
CLDN4-202ENST00000431918 IGHV2-5P01817 119 aa9.57□□□□□ -0.88
CLDN4-202ENST00000431918 ZNF146Q15072 292 aa9.57□□□□□ -0.88
CLDN4-202ENST00000431918 OR6C3Q9NZP0 311 aa9.57□□□□□ -0.88
CLDN4-202ENST00000431918 NCOR2Q9Y618 2525 aa9.57□□□□□ -0.88
CLDN4-202ENST00000431918 K7EM74 188 aa9.57□□□□□ -0.88
CLDN4-202ENST00000431918 SLC35E4Q6ICL7 350 aa9.57□□□□□ -0.88
CLDN4-202ENST00000431918 C1orf162Q8NEQ5 155 aaPredicted RBP9.57□□□□□ -0.88
CLDN4-202ENST00000431918 PINX1Q96BK5 328 aaKnown RBP9.57□□□□□ -0.88
CLDN4-202ENST00000431918 CIB3Q96Q77 187 aaPredicted RBP9.57□□□□□ -0.88
CLDN4-202ENST00000431918 VPS25Q9BRG1 176 aa9.57□□□□□ -0.88
CLDN4-202ENST00000431918 NGBQ9NPG2 151 aa9.57□□□□□ -0.88
CLDN4-202ENST00000431918 PLSCR4Q9NRQ2 329 aa9.57□□□□□ -0.88
CLDN4-202ENST00000431918 CYB5BO43169 146 aa9.56□□□□□ -0.88
CLDN4-202ENST00000431918 ACTL6BO94805 426 aa9.56□□□□□ -0.88
CLDN4-202ENST00000431918 CD55P08174 381 aa9.56□□□□□ -0.88
CLDN4-202ENST00000431918 PSMB3P49720 205 aa9.56□□□□□ -0.88
CLDN4-202ENST00000431918 MRPS11P82912 194 aaKnown RBP9.56□□□□□ -0.88
CLDN4-202ENST00000431918 TIMM23BQ5SRD1 257 aa9.56□□□□□ -0.88
CLDN4-202ENST00000431918 IL22RA2Q969J5 263 aa9.56□□□□□ -0.88
CLDN4-202ENST00000431918 NDUFAF3Q9BU61 184 aa9.56□□□□□ -0.88
CLDN4-202ENST00000431918 RPRMQ9NS64 109 aa9.56□□□□□ -0.88
CLDN4-202ENST00000431918 C17orf112F2Z3M2 114 aa9.56□□□□□ -0.88
CLDN4-202ENST00000431918 EGR1P18146 543 aa9.56□□□□□ -0.88
CLDN4-202ENST00000431918 CD200P41217 278 aa9.56□□□□□ -0.88
CLDN4-202ENST00000431918 REG1BP48304 166 aa9.56□□□□□ -0.88
CLDN4-202ENST00000431918 RPL30P62888 115 aaKnown RBP9.56□□□□□ -0.88
CLDN4-202ENST00000431918 KHDC3LQ587J8 217 aa9.56□□□□□ -0.88
CLDN4-202ENST00000431918 Q6ZR03 302 aa9.56□□□□□ -0.88
CLDN4-202ENST00000431918 NOL4LQ96MY1 436 aaPredicted RBP9.56□□□□□ -0.88
CLDN4-202ENST00000431918 PRSS47A8MTI9 375 aa9.56□□□□□ -0.88
CLDN4-202ENST00000431918 KIAA1324LA8MWY0 1029 aaPredicted RBP9.56□□□□□ -0.88
CLDN4-202ENST00000431918 EREGO14944 169 aa9.56□□□□□ -0.88
CLDN4-202ENST00000431918 IGKV1-5P01602 117 aa9.56□□□□□ -0.88
CLDN4-202ENST00000431918 IGKV3-15P01624 115 aa9.56□□□□□ -0.88
CLDN4-202ENST00000431918 ADH4P08319 380 aa9.56□□□□□ -0.88
CLDN4-202ENST00000431918 SLC25A6P12236 298 aa9.56□□□□□ -0.88
CLDN4-202ENST00000431918 TNFRSF1AP19438 455 aa9.56□□□□□ -0.88
CLDN4-202ENST00000431918 ZNF474Q6S9Z5 364 aaPredicted RBP9.56□□□□□ -0.88
CLDN4-202ENST00000431918 SMIM7Q9BQ49 75 aa9.56□□□□□ -0.88
CLDN4-202ENST00000431918 GCM1Q9NP62 436 aa9.56□□□□□ -0.88
CLDN4-202ENST00000431918 CBLN4Q9NTU7 201 aa9.56□□□□□ -0.88
CLDN4-202ENST00000431918 ZNF705FA8MVS1 300 aaPredicted RBP9.55□□□□□ -0.88
CLDN4-202ENST00000431918 ATXN7O15265 892 aaPredicted RBP9.55□□□□□ -0.88
CLDN4-202ENST00000431918 SCGB1D1O95968 90 aa9.55□□□□□ -0.88
CLDN4-202ENST00000431918 ZNF705DP0CH99 300 aaPredicted RBP9.55□□□□□ -0.88
CLDN4-202ENST00000431918 ZNF705BP0CI00 300 aaPredicted RBP9.55□□□□□ -0.88
CLDN4-202ENST00000431918 COX5AP20674 150 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms