RNA–Protein interactions for RNA: ENST00000423442.6

LINC00458-201, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best) BASIC

Gene LINC00458, Length 1,060 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-201ENST00000423442 FAM3DQ96BQ1 224 aa4.45□□□□□ -1.7
LINC00458-201ENST00000423442 CMTM3Q96MX0 182 aa4.45□□□□□ -1.7
LINC00458-201ENST00000423442 ZNF251Q9BRH9 671 aa4.45□□□□□ -1.7
LINC00458-201ENST00000423442 ZNF702PQ9H963 129 aa4.45□□□□□ -1.7
LINC00458-201ENST00000423442 PPP1R14DQ9NXH3 145 aa4.45□□□□□ -1.7
LINC00458-201ENST00000423442 ZNF221Q9UK13 617 aa4.45□□□□□ -1.7
LINC00458-201ENST00000423442 SSR3Q9UNL2 185 aa4.45□□□□□ -1.7
LINC00458-201ENST00000423442 AK6Q9Y3D8 172 aaKnown RBP4.45□□□□□ -1.7
LINC00458-201ENST00000423442 TSSC4Q9Y5U2 329 aaPredicted RBP4.45□□□□□ -1.7
LINC00458-201ENST00000423442 TRAV1-2A0A0B4J238 106 aa4.44□□□□□ -1.7
LINC00458-201ENST00000423442 TRDV1A0A1B0GX56 115 aa4.44□□□□□ -1.7
LINC00458-201ENST00000423442 RPS10-NUDT3A0A1W2PQS6 291 aa4.44□□□□□ -1.7
LINC00458-201ENST00000423442 PSMB11A5LHX3 300 aa4.44□□□□□ -1.7
LINC00458-201ENST00000423442 C15orf65H3BRN8 121 aa4.44□□□□□ -1.7
LINC00458-201ENST00000423442 RAB29O14966 203 aa4.44□□□□□ -1.7
LINC00458-201ENST00000423442 PLXNB1O43157 2135 aa4.44□□□□□ -1.7
LINC00458-201ENST00000423442 FGF16O43320 207 aa4.44□□□□□ -1.7
LINC00458-201ENST00000423442 YPEL1O60688 119 aa4.44□□□□□ -1.7
LINC00458-201ENST00000423442 CD28P10747 220 aa4.44□□□□□ -1.7
LINC00458-201ENST00000423442 RAB3BP20337 219 aa4.44□□□□□ -1.7
LINC00458-201ENST00000423442 GALP22466 123 aa4.44□□□□□ -1.7
LINC00458-201ENST00000423442 PSMB9P28065 219 aa4.44□□□□□ -1.7
LINC00458-201ENST00000423442 CHATP28329 748 aa4.44□□□□□ -1.7
LINC00458-201ENST00000423442 MC5RP33032 325 aa4.44□□□□□ -1.7
LINC00458-201ENST00000423442 VEGFCP49767 419 aa4.44□□□□□ -1.7
LINC00458-201ENST00000423442 GABARAPL2P60520 117 aa4.44□□□□□ -1.7
LINC00458-201ENST00000423442 FABP5Q01469 135 aa4.44□□□□□ -1.7
LINC00458-201ENST00000423442 ARFRP1Q13795 201 aa4.44□□□□□ -1.7
LINC00458-201ENST00000423442 PLGLAQ15195 96 aa4.44□□□□□ -1.7
LINC00458-201ENST00000423442 CT45A1Q5HYN5 189 aa4.44□□□□□ -1.7
LINC00458-201ENST00000423442 LDLRAD2Q5SZI1 272 aa4.44□□□□□ -1.7
LINC00458-201ENST00000423442 HES5Q5TA89 166 aa4.44□□□□□ -1.7
LINC00458-201ENST00000423442 ASPHD1Q5U4P2 390 aa4.44□□□□□ -1.7
LINC00458-201ENST00000423442 OR10K2Q6IF99 312 aa4.44□□□□□ -1.7
LINC00458-201ENST00000423442 TMEM91Q6ZNR0 172 aa4.44□□□□□ -1.7
LINC00458-201ENST00000423442 SLC25A48Q6ZT89 311 aaKnown RBP4.44□□□□□ -1.7
LINC00458-201ENST00000423442 MOB1BQ7L9L4 216 aa4.44□□□□□ -1.7
LINC00458-201ENST00000423442 SLC35E3Q7Z769 313 aa4.44□□□□□ -1.7
LINC00458-201ENST00000423442 TPRA1Q86W33 373 aa4.44□□□□□ -1.7
LINC00458-201ENST00000423442 COMMD1Q8N668 190 aa4.44□□□□□ -1.7
LINC00458-201ENST00000423442 OR51D1Q8NGF3 324 aa4.44□□□□□ -1.7
LINC00458-201ENST00000423442 OR52L2PQ8NGH6 319 aa4.44□□□□□ -1.7
LINC00458-201ENST00000423442 OR10V1Q8NGI7 309 aa4.44□□□□□ -1.7
LINC00458-201ENST00000423442 CT45A3Q8NHU0 189 aa4.44□□□□□ -1.7
LINC00458-201ENST00000423442 SGCDQ92629 289 aa4.44□□□□□ -1.7
LINC00458-201ENST00000423442 YPEL2Q96QA6 119 aa4.44□□□□□ -1.7
LINC00458-201ENST00000423442 CMSS1Q9BQ75 279 aaKnown RBP4.44□□□□□ -1.7
LINC00458-201ENST00000423442 SULT4A1Q9BR01 284 aa4.44□□□□□ -1.7
LINC00458-201ENST00000423442 ATG5Q9H1Y0 275 aa4.44□□□□□ -1.7
LINC00458-201ENST00000423442 VCX3AQ9NNX9 186 aa4.44□□□□□ -1.7
LINC00458-201ENST00000423442 ZNF581Q9P0T4 197 aa4.44□□□□□ -1.7
LINC00458-201ENST00000423442 PIPOXQ9P0Z9 390 aa4.44□□□□□ -1.7
LINC00458-201ENST00000423442 RCC2Q9P258 522 aaKnown RBP4.44□□□□□ -1.7
LINC00458-201ENST00000423442 KIAA1456Q9P272 454 aa4.44□□□□□ -1.7
LINC00458-201ENST00000423442 JPT1Q9UK76 154 aa4.44□□□□□ -1.7
LINC00458-201ENST00000423442 RBM7Q9Y580 266 aaKnown RBP4.44□□□□□ -1.7
LINC00458-201ENST00000423442 A0A075B6Q4 140 aa4.43□□□□□ -1.7
LINC00458-201ENST00000423442 IGHV3-72A0A0B4J1Y9 119 aa4.43□□□□□ -1.7
LINC00458-201ENST00000423442 A0A1W2PPI3 338 aa4.43□□□□□ -1.7
LINC00458-201ENST00000423442 IFITM5A6NNB3 132 aa4.43□□□□□ -1.7
LINC00458-201ENST00000423442 TMEM14DPA8MWL7 114 aa4.43□□□□□ -1.7
LINC00458-201ENST00000423442 TRDCB7Z8K6 153 aa4.43□□□□□ -1.7
LINC00458-201ENST00000423442 TEX22C9J3V5 150 aa4.43□□□□□ -1.7
LINC00458-201ENST00000423442 H7C2Y5 167 aa4.43□□□□□ -1.7
LINC00458-201ENST00000423442 LDLRAD4O15165 306 aa4.43□□□□□ -1.7
LINC00458-201ENST00000423442 SOCS1O15524 211 aa4.43□□□□□ -1.7
LINC00458-201ENST00000423442 LANCL1O43813 399 aa4.43□□□□□ -1.7
LINC00458-201ENST00000423442 SCGNO76038 276 aa4.43□□□□□ -1.7
LINC00458-201ENST00000423442 CD37P11049 281 aa4.43□□□□□ -1.7
LINC00458-201ENST00000423442 CD40LGP29965 261 aa4.43□□□□□ -1.7
LINC00458-201ENST00000423442 SOX6P35712 828 aa4.43□□□□□ -1.7
LINC00458-201ENST00000423442 PPP1CCP36873 323 aaKnown RBP4.43□□□□□ -1.7
LINC00458-201ENST00000423442 SERPINB10P48595 397 aa4.43□□□□□ -1.7
LINC00458-201ENST00000423442 CLDN12P56749 244 aa4.43□□□□□ -1.7
LINC00458-201ENST00000423442 CBX3Q13185 183 aa4.43□□□□□ -1.7
LINC00458-201ENST00000423442 KIR2DS1Q14954 304 aa4.43□□□□□ -1.7
LINC00458-201ENST00000423442 PNLIPRP3Q17RR3 467 aa4.43□□□□□ -1.7
LINC00458-201ENST00000423442 LY6G6FQ5SQ64 297 aa4.43□□□□□ -1.7
LINC00458-201ENST00000423442 SIGIRRQ6IA17 410 aa4.43□□□□□ -1.7
LINC00458-201ENST00000423442 C22orf42Q6IC83 251 aa4.43□□□□□ -1.7
LINC00458-201ENST00000423442 TEX38Q6PEX7 206 aa4.43□□□□□ -1.7
LINC00458-201ENST00000423442 LYPD6Q86Y78 171 aa4.43□□□□□ -1.7
LINC00458-201ENST00000423442 GAPTQ8N292 157 aa4.43□□□□□ -1.7
LINC00458-201ENST00000423442 FAM89BQ8N5H3 189 aa4.43□□□□□ -1.7
LINC00458-201ENST00000423442 OR10J5Q8NHC4 309 aa4.43□□□□□ -1.7
LINC00458-201ENST00000423442 MRPL30Q8TCC3 161 aaKnown RBP4.43□□□□□ -1.7
LINC00458-201ENST00000423442 RAB3CQ96E17 227 aa4.43□□□□□ -1.7
LINC00458-201ENST00000423442 ABHD1Q96SE0 405 aa4.43□□□□□ -1.7
LINC00458-201ENST00000423442 CITED2Q99967 270 aaPredicted RBP4.43□□□□□ -1.7
LINC00458-201ENST00000423442 NICN1Q9BSH3 213 aa4.43□□□□□ -1.7
LINC00458-201ENST00000423442 ABHD14AQ9BUJ0 271 aa4.43□□□□□ -1.7
LINC00458-201ENST00000423442 TM2D1Q9BX74 207 aa4.43□□□□□ -1.7
LINC00458-201ENST00000423442 C12orf4Q9NQ89 552 aa4.43□□□□□ -1.7
LINC00458-201ENST00000423442 ZFP57Q9NU63 452 aa4.43□□□□□ -1.7
LINC00458-201ENST00000423442 NDUFB11Q9NX14 153 aa4.43□□□□□ -1.7
LINC00458-201ENST00000423442 ZMAT5Q9UDW3 170 aaKnown RBP4.43□□□□□ -1.7
LINC00458-201ENST00000423442 AK3Q9UIJ7 227 aa4.43□□□□□ -1.7
LINC00458-201ENST00000423442 DNAH1Q9P2D7 4330 aa4.42□□□□□ -1.7
LINC00458-201ENST00000423442 GAGE10A6NGK3 116 aa4.42□□□□□ -1.7
LINC00458-201ENST00000423442 BET1O15155 118 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 108.3 ms