RNA–Protein interactions for RNA: ENST00000413601.3

LIMS4-201, Transcript of LIM zinc finger domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LIMS4, Length 1,215 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS4-201ENST00000413601 COMMD3Q9UBI1 195 aa11.55□□□□□ -0.56
LIMS4-201ENST00000413601 SRRM4A7MD48 611 aaKnown RBP11.54□□□□□ -0.56
LIMS4-201ENST00000413601 ARPC1BO15143 372 aaKnown RBP11.54□□□□□ -0.56
LIMS4-201ENST00000413601 CRYZL1O95825 349 aa11.54□□□□□ -0.56
LIMS4-201ENST00000413601 IGLV2-14P01704 120 aa11.54□□□□□ -0.56
LIMS4-201ENST00000413601 EIF4EP06730 217 aaKnown RBP11.54□□□□□ -0.56
LIMS4-201ENST00000413601 CRYGBP07316 175 aa11.54□□□□□ -0.56
LIMS4-201ENST00000413601 CBX5P45973 191 aa11.54□□□□□ -0.56
LIMS4-201ENST00000413601 RAB9AP51151 201 aa11.54□□□□□ -0.56
LIMS4-201ENST00000413601 RAB25P57735 213 aa11.54□□□□□ -0.56
LIMS4-201ENST00000413601 TAS2R20P59543 309 aa11.54□□□□□ -0.56
LIMS4-201ENST00000413601 TMEM267Q0VDI3 215 aaPredicted RBP11.54□□□□□ -0.56
LIMS4-201ENST00000413601 FXYD3Q14802 87 aa11.54□□□□□ -0.56
LIMS4-201ENST00000413601 TMEM69Q5SWH9 247 aa11.54□□□□□ -0.56
LIMS4-201ENST00000413601 UNQ5815/PRO19632Q6UWF5 114 aa11.54□□□□□ -0.56
LIMS4-201ENST00000413601 ANKRD13BQ86YJ7 626 aa11.54□□□□□ -0.56
LIMS4-201ENST00000413601 ZNF491Q8N8L2 437 aa11.54□□□□□ -0.56
LIMS4-201ENST00000413601 LFNGQ8NES3 379 aa11.54□□□□□ -0.56
LIMS4-201ENST00000413601 SNAPC3Q92966 411 aa11.54□□□□□ -0.56
LIMS4-201ENST00000413601 KCTD12Q96CX2 325 aaKnown RBP11.54□□□□□ -0.56
LIMS4-201ENST00000413601 UBE2E2Q96LR5 201 aa11.54□□□□□ -0.56
LIMS4-201ENST00000413601 GNB4Q9HAV0 340 aa11.54□□□□□ -0.56
LIMS4-201ENST00000413601 NECAP2Q9NVZ3 263 aa11.54□□□□□ -0.56
LIMS4-201ENST00000413601 FOXA2Q9Y261 457 aaPredicted RBP11.54□□□□□ -0.56
LIMS4-201ENST00000413601 RBMX2Q9Y388 322 aaKnown RBP11.54□□□□□ -0.56
LIMS4-201ENST00000413601 SLC22A5O76082 557 aa11.53□□□□□ -0.56
LIMS4-201ENST00000413601 CNIH1O95406 144 aa11.53□□□□□ -0.56
LIMS4-201ENST00000413601 DUS4LO95620 317 aaKnown RBP11.53□□□□□ -0.56
LIMS4-201ENST00000413601 AADACP22760 399 aa11.53□□□□□ -0.56
LIMS4-201ENST00000413601 FCGR2CP31995 323 aa11.53□□□□□ -0.56
LIMS4-201ENST00000413601 GNB1P62873 340 aa11.53□□□□□ -0.56
LIMS4-201ENST00000413601 RPL30P62888 115 aaKnown RBP11.53□□□□□ -0.56
LIMS4-201ENST00000413601 SSBP2P81877 361 aaPredicted RBP11.53□□□□□ -0.56
LIMS4-201ENST00000413601 CTF1Q16619 201 aa11.53□□□□□ -0.56
LIMS4-201ENST00000413601 AKIRIN2Q53H80 203 aa11.53□□□□□ -0.56
LIMS4-201ENST00000413601 ACTBL2Q562R1 376 aa11.53□□□□□ -0.56
LIMS4-201ENST00000413601 OR2B11Q5JQS5 317 aa11.53□□□□□ -0.56
LIMS4-201ENST00000413601 GPR107Q5VW38 600 aa11.53□□□□□ -0.56
LIMS4-201ENST00000413601 KCTD9Q7L273 389 aa11.53□□□□□ -0.56
LIMS4-201ENST00000413601 GRPEL2Q8TAA5 225 aa11.53□□□□□ -0.56
LIMS4-201ENST00000413601 ARPC1AQ92747 370 aa11.53□□□□□ -0.56
LIMS4-201ENST00000413601 OR5B12Q96R08 314 aa11.53□□□□□ -0.56
LIMS4-201ENST00000413601 MRPS26Q9BYN8 205 aaKnown RBP11.53□□□□□ -0.56
LIMS4-201ENST00000413601 IFT46Q9NQC8 304 aa11.53□□□□□ -0.56
LIMS4-201ENST00000413601 TNCP24821 2201 aa11.52□□□□□ -0.56
LIMS4-201ENST00000413601 FCGR3BO75015 233 aa11.52□□□□□ -0.57
LIMS4-201ENST00000413601 TCTEX1D1Q8N7M0 179 aa11.52□□□□□ -0.57
LIMS4-201ENST00000413601 OR5AP2Q8NGF4 316 aa11.52□□□□□ -0.57
LIMS4-201ENST00000413601 SECTM1Q8WVN6 248 aa11.52□□□□□ -0.57
LIMS4-201ENST00000413601 GPHA2Q96T91 129 aa11.52□□□□□ -0.57
LIMS4-201ENST00000413601 DCUN1D5Q9BTE7 237 aa11.52□□□□□ -0.57
LIMS4-201ENST00000413601 VSIG4Q9Y279 399 aa11.52□□□□□ -0.57
LIMS4-201ENST00000413601 PRELID3BQ9Y3B1 194 aa11.52□□□□□ -0.57
LIMS4-201ENST00000413601 I3L521 148 aa11.51□□□□□ -0.57
LIMS4-201ENST00000413601 HPGDSO60760 199 aa11.51□□□□□ -0.57
LIMS4-201ENST00000413601 GABARAPO95166 117 aa11.51□□□□□ -0.57
LIMS4-201ENST00000413601 PPYP01298 95 aa11.51□□□□□ -0.57
LIMS4-201ENST00000413601 APOA1P02647 267 aa11.51□□□□□ -0.57
LIMS4-201ENST00000413601 HOXD3P31249 432 aaPredicted RBP11.51□□□□□ -0.57
LIMS4-201ENST00000413601 RORCP51449 518 aa11.51□□□□□ -0.57
LIMS4-201ENST00000413601 UBE2KP61086 200 aa11.51□□□□□ -0.57
LIMS4-201ENST00000413601 EIF4EBP1Q13541 118 aaPredicted RBP11.51□□□□□ -0.57
LIMS4-201ENST00000413601 CDK10Q15131 360 aa11.51□□□□□ -0.57
LIMS4-201ENST00000413601 MRGPRG-AS1Q2M3A8 158 aa11.51□□□□□ -0.57
LIMS4-201ENST00000413601 VMA21Q3ZAQ7 101 aa11.51□□□□□ -0.57
LIMS4-201ENST00000413601 IDO2Q6ZQW0 420 aa11.51□□□□□ -0.57
LIMS4-201ENST00000413601 REC114Q7Z4M0 266 aa11.51□□□□□ -0.57
LIMS4-201ENST00000413601 OR11H1Q8NG94 326 aa11.51□□□□□ -0.57
LIMS4-201ENST00000413601 OSR1Q8TAX0 266 aaPredicted RBP11.51□□□□□ -0.57
LIMS4-201ENST00000413601 TCTEX1D2Q8WW35 142 aa11.51□□□□□ -0.57
LIMS4-201ENST00000413601 ACOT12Q8WYK0 555 aa11.51□□□□□ -0.57
LIMS4-201ENST00000413601 MS4A10Q96PG2 267 aa11.51□□□□□ -0.57
LIMS4-201ENST00000413601 HSD17B10Q99714 261 aaKnown RBP11.51□□□□□ -0.57
LIMS4-201ENST00000413601 CCL28Q9NRJ3 127 aa11.51□□□□□ -0.57
LIMS4-201ENST00000413601 AURKAIP1Q9NWT8 199 aaPredicted RBP11.51□□□□□ -0.57
LIMS4-201ENST00000413601 TAS2R8Q9NYW2 309 aa11.51□□□□□ -0.57
LIMS4-201ENST00000413601 MRPS7Q9Y2R9 242 aaKnown RBP11.51□□□□□ -0.57
LIMS4-201ENST00000413601 SMIM31A0A1B0GVY4 71 aa11.5□□□□□ -0.57
LIMS4-201ENST00000413601 ELK1P19419 428 aa11.5□□□□□ -0.57
LIMS4-201ENST00000413601 PRSS3P35030 304 aa11.5□□□□□ -0.57
LIMS4-201ENST00000413601 ALDH3B2P48448 385 aa11.5□□□□□ -0.57
LIMS4-201ENST00000413601 FXYD4P59646 89 aa11.5□□□□□ -0.57
LIMS4-201ENST00000413601 KRTAP10-11P60412 298 aa11.5□□□□□ -0.57
LIMS4-201ENST00000413601 OVCH2Q7RTZ1 564 aa11.5□□□□□ -0.57
LIMS4-201ENST00000413601 GPR141Q7Z602 305 aa11.5□□□□□ -0.57
LIMS4-201ENST00000413601 MFSD4AQ8N468 514 aa11.5□□□□□ -0.57
LIMS4-201ENST00000413601 TEX45Q8NA69 505 aa11.5□□□□□ -0.57
LIMS4-201ENST00000413601 OR5T1Q8NG75 326 aa11.5□□□□□ -0.57
LIMS4-201ENST00000413601 OR5M8Q8NGP6 311 aa11.5□□□□□ -0.57
LIMS4-201ENST00000413601 OR1N2Q8NGR9 330 aa11.5□□□□□ -0.57
LIMS4-201ENST00000413601 CMTM3Q96MX0 182 aa11.5□□□□□ -0.57
LIMS4-201ENST00000413601 MCRIP2Q9BUT9 160 aaKnown RBP11.5□□□□□ -0.57
LIMS4-201ENST00000413601 SLC5A7Q9GZV3 580 aa11.5□□□□□ -0.57
LIMS4-201ENST00000413601 ALX4Q9H161 411 aaPredicted RBP11.5□□□□□ -0.57
LIMS4-201ENST00000413601 EHFQ9NZC4 300 aa11.5□□□□□ -0.57
LIMS4-201ENST00000413601 TNFSF12O43508 249 aa11.49□□□□□ -0.57
LIMS4-201ENST00000413601 SAA1P0DJI8 122 aaPredicted RBP11.49□□□□□ -0.57
LIMS4-201ENST00000413601 RFX2P48378 723 aa11.49□□□□□ -0.57
LIMS4-201ENST00000413601 BRWD1-AS2P59051 145 aa11.49□□□□□ -0.57
LIMS4-201ENST00000413601 TPPP2P59282 170 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms