RNA–Protein interactions for RNA: ENST00000413141.5

VPS41-204, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-204ENST00000413141 HPRT1P00492 218 aa5.39□□□□□ -1.55
VPS41-204ENST00000413141 APOA2P02652 100 aa5.39□□□□□ -1.55
VPS41-204ENST00000413141 IGKV1-16P04430 117 aa5.39□□□□□ -1.55
VPS41-204ENST00000413141 ARG1P05089 322 aa5.39□□□□□ -1.55
VPS41-204ENST00000413141 MSMBP08118 114 aa5.39□□□□□ -1.55
VPS41-204ENST00000413141 PET100P0DJ07 73 aa5.39□□□□□ -1.55
VPS41-204ENST00000413141 SLC25A6P12236 298 aa5.39□□□□□ -1.55
VPS41-204ENST00000413141 EPHA1P21709 976 aa5.39□□□□□ -1.55
VPS41-204ENST00000413141 PSMB6P28072 239 aa5.39□□□□□ -1.55
VPS41-204ENST00000413141 G6PCP35575 357 aa5.39□□□□□ -1.55
VPS41-204ENST00000413141 S100A10P60903 97 aa5.39□□□□□ -1.55
VPS41-204ENST00000413141 LOXL1Q08397 574 aaPredicted RBP5.39□□□□□ -1.55
VPS41-204ENST00000413141 RAB32Q13637 225 aa5.39□□□□□ -1.55
VPS41-204ENST00000413141 RTL8BQ17RB0 113 aa5.39□□□□□ -1.55
VPS41-204ENST00000413141 TPTE2P1Q5T6R2 138 aa5.39□□□□□ -1.55
VPS41-204ENST00000413141 THOC7Q6I9Y2 204 aaKnown RBP5.39□□□□□ -1.55
VPS41-204ENST00000413141 DHRS7BQ6IAN0 325 aaPredicted RBP5.39□□□□□ -1.55
VPS41-204ENST00000413141 C11orf87Q6NUJ2 197 aa5.39□□□□□ -1.55
VPS41-204ENST00000413141 PRSS57Q6UWY2 283 aa5.39□□□□□ -1.55
VPS41-204ENST00000413141 TGIF2LXQ8IUE1 241 aa5.39□□□□□ -1.55
VPS41-204ENST00000413141 C9orf62Q8N4C0 152 aa5.39□□□□□ -1.55
VPS41-204ENST00000413141 OR5AN1Q8NGI8 311 aa5.39□□□□□ -1.55
VPS41-204ENST00000413141 GPR146Q96CH1 333 aa5.39□□□□□ -1.55
VPS41-204ENST00000413141 R3HDM4Q96D70 268 aa5.39□□□□□ -1.55
VPS41-204ENST00000413141 RRNAD1Q96FB5 475 aaKnown RBP5.39□□□□□ -1.55
VPS41-204ENST00000413141 NABP2Q9BQ15 211 aa5.39□□□□□ -1.55
VPS41-204ENST00000413141 PCGF1Q9BSM1 259 aa5.39□□□□□ -1.55
VPS41-204ENST00000413141 SLC35D1Q9NTN3 355 aa5.39□□□□□ -1.55
VPS41-204ENST00000413141 GSKIPQ9P0R6 139 aa5.39□□□□□ -1.55
VPS41-204ENST00000413141 MBD2Q9UBB5 411 aa5.39□□□□□ -1.55
VPS41-204ENST00000413141 CACNG5Q9UF02 275 aa5.39□□□□□ -1.55
VPS41-204ENST00000413141 MMP24Q9Y5R2 645 aa5.39□□□□□ -1.55
VPS41-204ENST00000413141 DOCK11Q5JSL3 2073 aa5.39□□□□□ -1.55
VPS41-204ENST00000413141 ARID1AO14497 2285 aa5.38□□□□□ -1.55
VPS41-204ENST00000413141 IGHV1-3A0A0C4DH29 117 aa5.38□□□□□ -1.55
VPS41-204ENST00000413141 A0A1B0GU03 582 aa5.38□□□□□ -1.55
VPS41-204ENST00000413141 A0A1W2PPI3 338 aa5.38□□□□□ -1.55
VPS41-204ENST00000413141 LEUTXA8MZ59 168 aa5.38□□□□□ -1.55
VPS41-204ENST00000413141 B4DSR2 109 aa5.38□□□□□ -1.55
VPS41-204ENST00000413141 RNF223E7ERA6 249 aa5.38□□□□□ -1.55
VPS41-204ENST00000413141 PITX3O75364 302 aa5.38□□□□□ -1.55
VPS41-204ENST00000413141 DEDDO75618 318 aa5.38□□□□□ -1.55
VPS41-204ENST00000413141 KRASP01116 189 aa5.38□□□□□ -1.55
VPS41-204ENST00000413141 MBPP02686 304 aaPredicted RBP5.38□□□□□ -1.55
VPS41-204ENST00000413141 RRASP10301 218 aa5.38□□□□□ -1.55
VPS41-204ENST00000413141 SLC25A4P12235 298 aa5.38□□□□□ -1.55
VPS41-204ENST00000413141 LYL1P12980 280 aa5.38□□□□□ -1.55
VPS41-204ENST00000413141 NQO2P16083 231 aa5.38□□□□□ -1.55
VPS41-204ENST00000413141 HTR1DP28221 377 aa5.38□□□□□ -1.55
VPS41-204ENST00000413141 CEACAM3P40198 252 aa5.38□□□□□ -1.55
VPS41-204ENST00000413141 RAB13P51153 203 aa5.38□□□□□ -1.55
VPS41-204ENST00000413141 TAGLNQ01995 201 aaKnown RBP5.38□□□□□ -1.55
VPS41-204ENST00000413141 PAX8Q06710 450 aa5.38□□□□□ -1.55
VPS41-204ENST00000413141 SMCO1Q147U7 214 aa5.38□□□□□ -1.55
VPS41-204ENST00000413141 IZUMO4Q1ZYL8 232 aa5.38□□□□□ -1.55
VPS41-204ENST00000413141 MIDNQ504T8 468 aa5.38□□□□□ -1.55
VPS41-204ENST00000413141 LDLRAD2Q5SZI1 272 aa5.38□□□□□ -1.55
VPS41-204ENST00000413141 PRSS54Q6PEW0 395 aa5.38□□□□□ -1.55
VPS41-204ENST00000413141 Q6ZRM9 215 aa5.38□□□□□ -1.55
VPS41-204ENST00000413141 PDPNQ86YL7 162 aa5.38□□□□□ -1.55
VPS41-204ENST00000413141 PDZD9Q8IXQ8 264 aa5.38□□□□□ -1.55
VPS41-204ENST00000413141 OR1S1Q8NH92 325 aa5.38□□□□□ -1.55
VPS41-204ENST00000413141 THAP6Q8TBB0 222 aa5.38□□□□□ -1.55
VPS41-204ENST00000413141 RPEQ96AT9 228 aa5.38□□□□□ -1.55
VPS41-204ENST00000413141 Q96MF0 132 aa5.38□□□□□ -1.55
VPS41-204ENST00000413141 TMEM140Q9NV12 185 aa5.38□□□□□ -1.55
VPS41-204ENST00000413141 COA4Q9NYJ1 87 aa5.38□□□□□ -1.55
VPS41-204ENST00000413141 RCL1Q9Y2P8 373 aaKnown RBP5.38□□□□□ -1.55
VPS41-204ENST00000413141 WASHC3Q9Y3C0 194 aa5.38□□□□□ -1.55
VPS41-204ENST00000413141 POMT1Q9Y6A1 747 aa5.38□□□□□ -1.55
VPS41-204ENST00000413141 ARHGAP32A7KAX9 2087 aa5.37□□□□□ -1.55
VPS41-204ENST00000413141 TRAV20A0A0B4J274 112 aa5.37□□□□□ -1.55
VPS41-204ENST00000413141 A0A1W2PRD5 423 aa5.37□□□□□ -1.55
VPS41-204ENST00000413141 A0A1W2PRF3 423 aa5.37□□□□□ -1.55
VPS41-204ENST00000413141 A0A1W2PRM7 423 aa5.37□□□□□ -1.55
VPS41-204ENST00000413141 FAM90A9PA6NNJ1 464 aa5.37□□□□□ -1.55
VPS41-204ENST00000413141 HMSDA8MTL9 139 aa5.37□□□□□ -1.55
VPS41-204ENST00000413141 H0YIZ8 118 aa5.37□□□□□ -1.55
VPS41-204ENST00000413141 H7C2Y5 167 aa5.37□□□□□ -1.55
VPS41-204ENST00000413141 K7EPK0 472 aa5.37□□□□□ -1.55
VPS41-204ENST00000413141 ARPC5O15511 151 aa5.37□□□□□ -1.55
VPS41-204ENST00000413141 ST8SIA3O43173 380 aa5.37□□□□□ -1.55
VPS41-204ENST00000413141 NXPH3O95157 252 aa5.37□□□□□ -1.55
VPS41-204ENST00000413141 HRASP01112 189 aa5.37□□□□□ -1.55
VPS41-204ENST00000413141 GAPDHP04406 335 aaKnown RBP5.37□□□□□ -1.55
VPS41-204ENST00000413141 OR9G9P0C7N8 305 aa5.37□□□□□ -1.55
VPS41-204ENST00000413141 GATA3P23771 443 aa5.37□□□□□ -1.55
VPS41-204ENST00000413141 MC5RP33032 325 aa5.37□□□□□ -1.55
VPS41-204ENST00000413141 NKX2-1P43699 371 aaPredicted RBP5.37□□□□□ -1.55
VPS41-204ENST00000413141 UBE2E1P51965 193 aa5.37□□□□□ -1.55
VPS41-204ENST00000413141 ERVK-16P61578 105 aa5.37□□□□□ -1.55
VPS41-204ENST00000413141 POU2AF1Q16633 256 aa5.37□□□□□ -1.55
VPS41-204ENST00000413141 TMEM177Q53S58 311 aa5.37□□□□□ -1.55
VPS41-204ENST00000413141 MINOS1Q5TGZ0 78 aa5.37□□□□□ -1.55
VPS41-204ENST00000413141 LAMTOR1Q6IAA8 161 aa5.37□□□□□ -1.55
VPS41-204ENST00000413141 TMEM65Q6PI78 240 aa5.37□□□□□ -1.55
VPS41-204ENST00000413141 SSX9Q7RTT3 188 aa5.37□□□□□ -1.55
VPS41-204ENST00000413141 H2BFWTQ7Z2G1 175 aa5.37□□□□□ -1.55
VPS41-204ENST00000413141 LHFPL4Q7Z7J7 247 aa5.37□□□□□ -1.55
VPS41-204ENST00000413141 FOXRED2Q8IWF2 684 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms