RNA–Protein interactions for RNA: ENST00000411973.3

TRAPPC12-203, Transcript of trafficking protein particle complex 12, humanhuman

TSL 5

Gene TRAPPC12, Length 838 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-203ENST00000411973 CBX3Q13185 183 aa12.23□□□□□ -0.45
TRAPPC12-203ENST00000411973 C5orf64Q2M2E5 130 aa12.23□□□□□ -0.45
TRAPPC12-203ENST00000411973 TSNAXQ99598 290 aaKnown RBP12.23□□□□□ -0.45
TRAPPC12-203ENST00000411973 KIAA1456Q9P272 454 aa12.23□□□□□ -0.45
TRAPPC12-203ENST00000411973 RRHO14718 337 aa12.22□□□□□ -0.45
TRAPPC12-203ENST00000411973 HLA-DRB1P01911 266 aa12.22□□□□□ -0.45
TRAPPC12-203ENST00000411973 ZNF735P0CB33 412 aa12.22□□□□□ -0.45
TRAPPC12-203ENST00000411973 VDAC2P45880 294 aaPredicted RBP12.22□□□□□ -0.45
TRAPPC12-203ENST00000411973 BRWD1-AS2P59051 145 aa12.22□□□□□ -0.45
TRAPPC12-203ENST00000411973 RPS16P62249 146 aaKnown RBP12.22□□□□□ -0.45
TRAPPC12-203ENST00000411973 PSG5Q15238 335 aa12.22□□□□□ -0.45
TRAPPC12-203ENST00000411973 ARSJQ5FYB0 599 aaPredicted RBP12.22□□□□□ -0.45
TRAPPC12-203ENST00000411973 C9orf152Q5JTZ5 239 aa12.22□□□□□ -0.45
TRAPPC12-203ENST00000411973 CMTM1Q8IZ96 169 aa12.22□□□□□ -0.45
TRAPPC12-203ENST00000411973 TERB2Q8NHR7 220 aa12.22□□□□□ -0.45
TRAPPC12-203ENST00000411973 OSR1Q8TAX0 266 aaPredicted RBP12.22□□□□□ -0.45
TRAPPC12-203ENST00000411973 WIPF2Q8TF74 440 aaPredicted RBP12.22□□□□□ -0.45
TRAPPC12-203ENST00000411973 TRIM63Q969Q1 353 aa12.22□□□□□ -0.45
TRAPPC12-203ENST00000411973 RSRP1Q9BUV0 290 aa12.22□□□□□ -0.45
TRAPPC12-203ENST00000411973 SRRQ9GZT4 340 aa12.22□□□□□ -0.45
TRAPPC12-203ENST00000411973 TNCP24821 2201 aa12.22□□□□□ -0.45
TRAPPC12-203ENST00000411973 HAX1O00165 279 aa12.21□□□□□ -0.45
TRAPPC12-203ENST00000411973 GPR31O00270 319 aa12.21□□□□□ -0.45
TRAPPC12-203ENST00000411973 KCNAB3O43448 404 aa12.21□□□□□ -0.45
TRAPPC12-203ENST00000411973 TNFSF12O43508 249 aa12.21□□□□□ -0.45
TRAPPC12-203ENST00000411973 FCGR3BO75015 233 aa12.21□□□□□ -0.45
TRAPPC12-203ENST00000411973 IGLV2-23P01705 113 aa12.21□□□□□ -0.45
TRAPPC12-203ENST00000411973 CATR1Q13166 79 aa12.21□□□□□ -0.45
TRAPPC12-203ENST00000411973 TMEM95Q3KNT9 176 aa12.21□□□□□ -0.45
TRAPPC12-203ENST00000411973 LIN54Q6MZP7 749 aa12.21□□□□□ -0.45
TRAPPC12-203ENST00000411973 SHISA2Q6UWI4 295 aa12.21□□□□□ -0.45
TRAPPC12-203ENST00000411973 SLC38A6Q8IZM9 456 aa12.21□□□□□ -0.45
TRAPPC12-203ENST00000411973 GDPD1Q8N9F7 314 aa12.21□□□□□ -0.45
TRAPPC12-203ENST00000411973 OR4C16Q8NGL9 310 aa12.21□□□□□ -0.45
TRAPPC12-203ENST00000411973 TCTEX1D2Q8WW35 142 aa12.21□□□□□ -0.45
TRAPPC12-203ENST00000411973 DEDD2Q8WXF8 326 aa12.21□□□□□ -0.45
TRAPPC12-203ENST00000411973 GPHA2Q96T91 129 aa12.21□□□□□ -0.45
TRAPPC12-203ENST00000411973 SRRM4A7MD48 611 aaKnown RBP12.2□□□□□ -0.46
TRAPPC12-203ENST00000411973 DISC1C4P0D8 188 aa12.2□□□□□ -0.46
TRAPPC12-203ENST00000411973 SHOXO15266 292 aa12.2□□□□□ -0.46
TRAPPC12-203ENST00000411973 RBFOX2O43251 390 aaKnown RBP eCLIP12.2□□□□□ -0.46
TRAPPC12-203ENST00000411973 PEX14O75381 377 aa12.2□□□□□ -0.46
TRAPPC12-203ENST00000411973 PGLYRP1O75594 196 aaPredicted RBP12.2□□□□□ -0.46
TRAPPC12-203ENST00000411973 CRYZL1O95825 349 aa12.2□□□□□ -0.46
TRAPPC12-203ENST00000411973 KIR2DS2P43631 304 aa12.2□□□□□ -0.46
TRAPPC12-203ENST00000411973 KRTAP10-3P60369 221 aa12.2□□□□□ -0.46
TRAPPC12-203ENST00000411973 ZNF45Q02386 682 aa12.2□□□□□ -0.46
TRAPPC12-203ENST00000411973 KLF9Q13886 244 aaPredicted RBP12.2□□□□□ -0.46
TRAPPC12-203ENST00000411973 SLC35E3Q7Z769 313 aa12.2□□□□□ -0.46
TRAPPC12-203ENST00000411973 KLHDC1Q8N7A1 406 aa12.2□□□□□ -0.46
TRAPPC12-203ENST00000411973 OR4S2Q8NH73 311 aa12.2□□□□□ -0.46
TRAPPC12-203ENST00000411973 HARBI1Q96MB7 349 aa12.2□□□□□ -0.46
TRAPPC12-203ENST00000411973 CITED1Q99966 193 aa12.2□□□□□ -0.46
TRAPPC12-203ENST00000411973 HSPB9Q9BQS6 159 aa12.2□□□□□ -0.46
TRAPPC12-203ENST00000411973 FBXL15Q9H469 300 aa12.2□□□□□ -0.46
TRAPPC12-203ENST00000411973 PTTG2Q9NZH5 202 aa12.2□□□□□ -0.46
TRAPPC12-203ENST00000411973 METTL1Q9UBP6 276 aaKnown RBP12.2□□□□□ -0.46
TRAPPC12-203ENST00000411973 ZNF580Q9UK33 172 aa12.2□□□□□ -0.46
TRAPPC12-203ENST00000411973 LINC01548A6NM66 108 aa12.19□□□□□ -0.46
TRAPPC12-203ENST00000411973 CRYGBP07316 175 aa12.19□□□□□ -0.46
TRAPPC12-203ENST00000411973 VSIG10L2P0DP72 767 aa12.19□□□□□ -0.46
TRAPPC12-203ENST00000411973 AP3S2P59780 193 aa12.19□□□□□ -0.46
TRAPPC12-203ENST00000411973 OR2B11Q5JQS5 317 aa12.19□□□□□ -0.46
TRAPPC12-203ENST00000411973 FAAP20Q6NZ36 180 aa12.19□□□□□ -0.46
TRAPPC12-203ENST00000411973 FOXRED2Q8IWF2 684 aa12.19□□□□□ -0.46
TRAPPC12-203ENST00000411973 SPAG16Q8N0X2 631 aa12.19□□□□□ -0.46
TRAPPC12-203ENST00000411973 TOMM5Q8N4H5 51 aa12.19□□□□□ -0.46
TRAPPC12-203ENST00000411973 MRGPRFQ96AM1 343 aa12.19□□□□□ -0.46
TRAPPC12-203ENST00000411973 ZNF486Q96H40 463 aaPredicted RBP12.19□□□□□ -0.46
TRAPPC12-203ENST00000411973 PRRT1Q99946 306 aa12.19□□□□□ -0.46
TRAPPC12-203ENST00000411973 SLC2A8Q9NY64 477 aa12.19□□□□□ -0.46
TRAPPC12-203ENST00000411973 IGHV7-81A0A0B4J1V7 117 aa12.18□□□□□ -0.46
TRAPPC12-203ENST00000411973 AP4M1O00189 453 aa12.18□□□□□ -0.46
TRAPPC12-203ENST00000411973 SLC25A17O43808 307 aa12.18□□□□□ -0.46
TRAPPC12-203ENST00000411973 IGF1P05019 195 aa12.18□□□□□ -0.46
TRAPPC12-203ENST00000411973 S100GP29377 79 aa12.18□□□□□ -0.46
TRAPPC12-203ENST00000411973 ECI1P42126 302 aa12.18□□□□□ -0.46
TRAPPC12-203ENST00000411973 UBE2KP61086 200 aa12.18□□□□□ -0.46
TRAPPC12-203ENST00000411973 RND3P61587 244 aa12.18□□□□□ -0.46
TRAPPC12-203ENST00000411973 SRSF4Q08170 494 aaKnown RBP12.18□□□□□ -0.46
TRAPPC12-203ENST00000411973 PLGLAQ15195 96 aa12.18□□□□□ -0.46
TRAPPC12-203ENST00000411973 SCGB2B2Q4G0G5 96 aa12.18□□□□□ -0.46
TRAPPC12-203ENST00000411973 TCTEX1D1Q8N7M0 179 aa12.18□□□□□ -0.46
TRAPPC12-203ENST00000411973 TEX45Q8NA69 505 aa12.18□□□□□ -0.46
TRAPPC12-203ENST00000411973 OR51S1Q8NGJ8 323 aa12.18□□□□□ -0.46
TRAPPC12-203ENST00000411973 OR51H1Q8NH63 302 aa12.18□□□□□ -0.46
TRAPPC12-203ENST00000411973 CD300LFQ8TDQ1 290 aa12.18□□□□□ -0.46
TRAPPC12-203ENST00000411973 CHPT1Q8WUD6 406 aa12.18□□□□□ -0.46
TRAPPC12-203ENST00000411973 SDHCQ99643 169 aaPredicted RBP12.18□□□□□ -0.46
TRAPPC12-203ENST00000411973 OR51J1Q9H342 316 aa12.18□□□□□ -0.46
TRAPPC12-203ENST00000411973 AKIP1Q9NQ31 210 aa12.18□□□□□ -0.46
TRAPPC12-203ENST00000411973 FCN1O00602 326 aa12.17□□□□□ -0.46
TRAPPC12-203ENST00000411973 RAMP3O60896 148 aa12.17□□□□□ -0.46
TRAPPC12-203ENST00000411973 RLN1P04808 185 aa12.17□□□□□ -0.46
TRAPPC12-203ENST00000411973 F2RP25116 425 aa12.17□□□□□ -0.46
TRAPPC12-203ENST00000411973 FAUP35544 74 aaKnown RBP12.17□□□□□ -0.46
TRAPPC12-203ENST00000411973 SURF2Q15527 256 aaPredicted RBP12.17□□□□□ -0.46
TRAPPC12-203ENST00000411973 BAK1Q16611 211 aa12.17□□□□□ -0.46
TRAPPC12-203ENST00000411973 VMA21Q3ZAQ7 101 aa12.17□□□□□ -0.46
TRAPPC12-203ENST00000411973 PHLDA2Q53GA4 152 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms