RNA–Protein interactions for RNA: ENST00000409129.2

NIF3L1-203, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 813 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-203ENST00000409129 VEGFCP49767 419 aa6.99□□□□□ -1.29
NIF3L1-203ENST00000409129 SSBP2P81877 361 aaPredicted RBP6.99□□□□□ -1.29
NIF3L1-203ENST00000409129 PJVKQ0ZLH3 352 aa6.99□□□□□ -1.29
NIF3L1-203ENST00000409129 MED22Q15528 200 aa6.99□□□□□ -1.29
NIF3L1-203ENST00000409129 HAGHQ16775 308 aa6.99□□□□□ -1.29
NIF3L1-203ENST00000409129 LIPKQ5VXJ0 399 aa6.99□□□□□ -1.29
NIF3L1-203ENST00000409129 IZUMO2Q6UXV1 221 aa6.99□□□□□ -1.29
NIF3L1-203ENST00000409129 OR9G4Q8NGQ1 327 aa6.99□□□□□ -1.29
NIF3L1-203ENST00000409129 TMEM203Q969S6 136 aa6.99□□□□□ -1.29
NIF3L1-203ENST00000409129 ARHGAP5-AS1Q96IT6 56 aa6.99□□□□□ -1.29
NIF3L1-203ENST00000409129 GFI1Q99684 422 aa6.99□□□□□ -1.29
NIF3L1-203ENST00000409129 SPATA25Q9BR10 227 aa6.99□□□□□ -1.29
NIF3L1-203ENST00000409129 KRTAP4-8Q9BYQ9 185 aa6.99□□□□□ -1.29
NIF3L1-203ENST00000409129 TINAGL1Q9GZM7 467 aaPredicted RBP6.99□□□□□ -1.29
NIF3L1-203ENST00000409129 SLC35D1Q9NTN3 355 aa6.99□□□□□ -1.29
NIF3L1-203ENST00000409129 PEF1Q9UBV8 284 aaKnown RBP6.99□□□□□ -1.29
NIF3L1-203ENST00000409129 AK6Q9Y3D8 172 aaKnown RBP6.99□□□□□ -1.29
NIF3L1-203ENST00000409129 ATF4P18848 351 aaPredicted RBP6.98□□□□□ -1.29
NIF3L1-203ENST00000409129 SERPINB10P48595 397 aa6.98□□□□□ -1.29
NIF3L1-203ENST00000409129 SYNJ2BPP57105 145 aa6.98□□□□□ -1.29
NIF3L1-203ENST00000409129 RAB11BQ15907 218 aa6.98□□□□□ -1.29
NIF3L1-203ENST00000409129 TATDN3Q17R31 274 aa6.98□□□□□ -1.29
NIF3L1-203ENST00000409129 C2orf76Q3KRA6 126 aa6.98□□□□□ -1.29
NIF3L1-203ENST00000409129 PLAC9Q5JTB6 97 aa6.98□□□□□ -1.29
NIF3L1-203ENST00000409129 ZNF343Q6P1L6 599 aa6.98□□□□□ -1.29
NIF3L1-203ENST00000409129 TMEM91Q6ZNR0 172 aa6.98□□□□□ -1.29
NIF3L1-203ENST00000409129 OR56B1Q8NGI3 324 aa6.98□□□□□ -1.29
NIF3L1-203ENST00000409129 OR4A4PQ8NGN8 299 aa6.98□□□□□ -1.29
NIF3L1-203ENST00000409129 UFD1Q92890 307 aa6.98□□□□□ -1.29
NIF3L1-203ENST00000409129 USMG5Q96IX5 58 aa6.98□□□□□ -1.29
NIF3L1-203ENST00000409129 TUBA4BQ9H853 241 aa6.98□□□□□ -1.29
NIF3L1-203ENST00000409129 SDHAF2Q9NX18 166 aa6.98□□□□□ -1.29
NIF3L1-203ENST00000409129 SCN3BQ9NY72 215 aa6.98□□□□□ -1.29
NIF3L1-203ENST00000409129 SIGLEC8Q9NYZ4 499 aa6.98□□□□□ -1.29
NIF3L1-203ENST00000409129 KMT2AQ03164 3969 aa6.98□□□□□ -1.29
NIF3L1-203ENST00000409129 SRRM4A7MD48 611 aaKnown RBP6.97□□□□□ -1.29
NIF3L1-203ENST00000409129 BET1O15155 118 aa6.97□□□□□ -1.29
NIF3L1-203ENST00000409129 SHOXO15266 292 aa6.97□□□□□ -1.29
NIF3L1-203ENST00000409129 FABP7O15540 132 aa6.97□□□□□ -1.29
NIF3L1-203ENST00000409129 DENRO43583 198 aaKnown RBP6.97□□□□□ -1.29
NIF3L1-203ENST00000409129 ARL6IP5O75915 188 aa6.97□□□□□ -1.29
NIF3L1-203ENST00000409129 IFNA6P05013 189 aa6.97□□□□□ -1.29
NIF3L1-203ENST00000409129 CSN3P07498 182 aa6.97□□□□□ -1.29
NIF3L1-203ENST00000409129 CD3GP09693 182 aa6.97□□□□□ -1.29
NIF3L1-203ENST00000409129 RANBP1P43487 201 aa6.97□□□□□ -1.29
NIF3L1-203ENST00000409129 CLDN12P56749 244 aa6.97□□□□□ -1.29
NIF3L1-203ENST00000409129 MRPS15P82914 257 aaKnown RBP6.97□□□□□ -1.29
NIF3L1-203ENST00000409129 CBX3Q13185 183 aa6.97□□□□□ -1.29
NIF3L1-203ENST00000409129 DYRK1AQ13627 763 aa6.97□□□□□ -1.29
NIF3L1-203ENST00000409129 TPBGQ13641 420 aa6.97□□□□□ -1.29
NIF3L1-203ENST00000409129 IRF3Q14653 427 aa6.97□□□□□ -1.29
NIF3L1-203ENST00000409129 TRAM1Q15629 374 aa6.97□□□□□ -1.29
NIF3L1-203ENST00000409129 MRGPRG-AS1Q2M3A8 158 aa6.97□□□□□ -1.29
NIF3L1-203ENST00000409129 TMEM177Q53S58 311 aa6.97□□□□□ -1.29
NIF3L1-203ENST00000409129 LCN12Q6JVE5 192 aa6.97□□□□□ -1.29
NIF3L1-203ENST00000409129 CDPF1Q6NVV7 123 aa6.97□□□□□ -1.29
NIF3L1-203ENST00000409129 GTSCR1Q86UQ5 136 aa6.97□□□□□ -1.29
NIF3L1-203ENST00000409129 Q8N402 240 aa6.97□□□□□ -1.29
NIF3L1-203ENST00000409129 BVESQ8NE79 360 aa6.97□□□□□ -1.29
NIF3L1-203ENST00000409129 OR10J5Q8NHC4 309 aa6.97□□□□□ -1.29
NIF3L1-203ENST00000409129 FAM3DQ96BQ1 224 aa6.97□□□□□ -1.29
NIF3L1-203ENST00000409129 HARBI1Q96MB7 349 aa6.97□□□□□ -1.29
NIF3L1-203ENST00000409129 THAP7Q9BT49 309 aaPredicted RBP6.97□□□□□ -1.29
NIF3L1-203ENST00000409129 OR2D2Q9H210 308 aa6.97□□□□□ -1.29
NIF3L1-203ENST00000409129 COA4Q9NYJ1 87 aa6.97□□□□□ -1.29
NIF3L1-203ENST00000409129 ADAM30Q9UKF2 790 aa6.97□□□□□ -1.29
NIF3L1-203ENST00000409129 RRP15Q9Y3B9 282 aaKnown RBP6.97□□□□□ -1.29
NIF3L1-203ENST00000409129 DNAH10Q8IVF4 4471 aa6.97□□□□□ -1.29
NIF3L1-203ENST00000409129 TRBV6-7A0A0A0MS04 114 aa6.96□□□□□ -1.3
NIF3L1-203ENST00000409129 TMEM272A0A1B0GTI8 110 aa6.96□□□□□ -1.3
NIF3L1-203ENST00000409129 MSGN1A6NI15 193 aa6.96□□□□□ -1.3
NIF3L1-203ENST00000409129 TRBV12-3P01733 135 aa6.96□□□□□ -1.3
NIF3L1-203ENST00000409129 GSTT2P0CG29 244 aa6.96□□□□□ -1.3
NIF3L1-203ENST00000409129 GSTT2BP0CG30 244 aa6.96□□□□□ -1.3
NIF3L1-203ENST00000409129 HSMCR30P0CW71 290 aa6.96□□□□□ -1.3
NIF3L1-203ENST00000409129 APELAP0DMC3 54 aa6.96□□□□□ -1.3
NIF3L1-203ENST00000409129 RRASP10301 218 aa6.96□□□□□ -1.3
NIF3L1-203ENST00000409129 PSMA1P25786 263 aaKnown RBP6.96□□□□□ -1.3
NIF3L1-203ENST00000409129 MECP2P51608 486 aaKnown RBP6.96□□□□□ -1.3
NIF3L1-203ENST00000409129 RPS25P62851 125 aaKnown RBP6.96□□□□□ -1.3
NIF3L1-203ENST00000409129 DEFA5Q01523 94 aa6.96□□□□□ -1.3
NIF3L1-203ENST00000409129 RTL8BQ17RB0 113 aa6.96□□□□□ -1.3
NIF3L1-203ENST00000409129 RPEL1Q2QD12 228 aa6.96□□□□□ -1.3
NIF3L1-203ENST00000409129 IGSF11Q5DX21 431 aa6.96□□□□□ -1.3
NIF3L1-203ENST00000409129 TEX45Q8NA69 505 aa6.96□□□□□ -1.3
NIF3L1-203ENST00000409129 SNAPC3Q92966 411 aa6.96□□□□□ -1.3
NIF3L1-203ENST00000409129 RAB3CQ96E17 227 aa6.96□□□□□ -1.3
NIF3L1-203ENST00000409129 C5orf30Q96GV9 206 aa6.96□□□□□ -1.3
NIF3L1-203ENST00000409129 CNBD2Q96M20 576 aa6.96□□□□□ -1.3
NIF3L1-203ENST00000409129 PHB2Q99623 299 aa6.96□□□□□ -1.3
NIF3L1-203ENST00000409129 CABLES2Q9BTV7 478 aa6.96□□□□□ -1.3
NIF3L1-203ENST00000409129 VCX3BQ9H321 246 aa6.96□□□□□ -1.3
NIF3L1-203ENST00000409129 RAB22AQ9UL26 194 aa6.96□□□□□ -1.3
NIF3L1-203ENST00000409129 KCNK7Q9Y2U2 307 aa6.96□□□□□ -1.3
NIF3L1-203ENST00000409129 V9GY05 133 aa6.96□□□□□ -1.3
NIF3L1-203ENST00000409129 ABCA13Q86UQ4 5058 aa6.96□□□□□ -1.3
NIF3L1-203ENST00000409129 A0A0B4J203 849 aa6.95□□□□□ -1.3
NIF3L1-203ENST00000409129 IZUMO1RA6ND01 250 aa6.95□□□□□ -1.3
NIF3L1-203ENST00000409129 AIREO43918 545 aa6.95□□□□□ -1.3
NIF3L1-203ENST00000409129 RBMXL2O75526 392 aaKnown RBP6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms