RNA–Protein interactions for RNA: ENST00000407298.7

APOBEC3B-204, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene APOBEC3B, Length 1,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-204ENST00000407298 ITGB1BP1O14713 200 aa9.34□□□□□ -0.91
APOBEC3B-204ENST00000407298 PDCD5O14737 125 aa9.34□□□□□ -0.91
APOBEC3B-204ENST00000407298 CA2P00918 260 aa9.34□□□□□ -0.91
APOBEC3B-204ENST00000407298 RAB3BP20337 219 aa9.34□□□□□ -0.91
APOBEC3B-204ENST00000407298 MYL9P24844 172 aa9.34□□□□□ -0.91
APOBEC3B-204ENST00000407298 FGF9P31371 208 aaPredicted RBP9.34□□□□□ -0.91
APOBEC3B-204ENST00000407298 HLA-DRB3P79483 266 aa9.34□□□□□ -0.91
APOBEC3B-204ENST00000407298 FXYD3Q14802 87 aa9.34□□□□□ -0.91
APOBEC3B-204ENST00000407298 PSG5Q15238 335 aa9.34□□□□□ -0.91
APOBEC3B-204ENST00000407298 KCTD21Q4G0X4 260 aa9.34□□□□□ -0.91
APOBEC3B-204ENST00000407298 IL34Q6ZMJ4 242 aa9.34□□□□□ -0.91
APOBEC3B-204ENST00000407298 LINC00322Q6ZN03 302 aaPredicted RBP9.34□□□□□ -0.91
APOBEC3B-204ENST00000407298 OR5T1Q8NG75 326 aa9.34□□□□□ -0.91
APOBEC3B-204ENST00000407298 OR5AN1Q8NGI8 311 aa9.34□□□□□ -0.91
APOBEC3B-204ENST00000407298 IL1F10Q8WWZ1 152 aa9.34□□□□□ -0.91
APOBEC3B-204ENST00000407298 USMG5Q96IX5 58 aa9.34□□□□□ -0.91
APOBEC3B-204ENST00000407298 OR51E2Q9H255 320 aa9.34□□□□□ -0.91
APOBEC3B-204ENST00000407298 CHMP1AQ9HD42 196 aaPredicted RBP9.34□□□□□ -0.91
APOBEC3B-204ENST00000407298 Q9N2K0 584 aa9.34□□□□□ -0.91
APOBEC3B-204ENST00000407298 C12orf4Q9NQ89 552 aa9.34□□□□□ -0.91
APOBEC3B-204ENST00000407298 OR1A1Q9P1Q5 309 aa9.34□□□□□ -0.91
APOBEC3B-204ENST00000407298 PEMTQ9UBM1 199 aa9.34□□□□□ -0.91
APOBEC3B-204ENST00000407298 RAB27BO00194 218 aa9.33□□□□□ -0.92
APOBEC3B-204ENST00000407298 MFNGO00587 321 aa9.33□□□□□ -0.92
APOBEC3B-204ENST00000407298 ST8SIA5O15466 376 aa9.33□□□□□ -0.92
APOBEC3B-204ENST00000407298 OR2A4O95047 310 aa9.33□□□□□ -0.92
APOBEC3B-204ENST00000407298 BRI3O95415 125 aa9.33□□□□□ -0.92
APOBEC3B-204ENST00000407298 CSN3P07498 182 aa9.33□□□□□ -0.92
APOBEC3B-204ENST00000407298 LGALS7P47929 136 aa9.33□□□□□ -0.92
APOBEC3B-204ENST00000407298 PSMD7P51665 324 aa9.33□□□□□ -0.92
APOBEC3B-204ENST00000407298 CD81P60033 236 aa9.33□□□□□ -0.92
APOBEC3B-204ENST00000407298 RPS16P62249 146 aaKnown RBP9.33□□□□□ -0.92
APOBEC3B-204ENST00000407298 RPEL1Q2QD12 228 aa9.33□□□□□ -0.92
APOBEC3B-204ENST00000407298 RPL39P5Q59GN2 51 aa9.33□□□□□ -0.92
APOBEC3B-204ENST00000407298 GLDNQ6ZMI3 551 aaPredicted RBP9.33□□□□□ -0.92
APOBEC3B-204ENST00000407298 OR56B1Q8NGI3 324 aa9.33□□□□□ -0.92
APOBEC3B-204ENST00000407298 GRPEL2Q8TAA5 225 aa9.33□□□□□ -0.92
APOBEC3B-204ENST00000407298 SETD6Q8TBK2 473 aa9.33□□□□□ -0.92
APOBEC3B-204ENST00000407298 EDARADDQ8WWZ3 215 aa9.33□□□□□ -0.92
APOBEC3B-204ENST00000407298 LINC00476Q8WZB0 136 aa9.33□□□□□ -0.92
APOBEC3B-204ENST00000407298 SNAPC3Q92966 411 aa9.33□□□□□ -0.92
APOBEC3B-204ENST00000407298 FAM110AQ9BQ89 295 aa9.33□□□□□ -0.92
APOBEC3B-204ENST00000407298 NEURL2Q9BR09 285 aa9.33□□□□□ -0.92
APOBEC3B-204ENST00000407298 RIMS4Q9H426 269 aaPredicted RBP9.33□□□□□ -0.92
APOBEC3B-204ENST00000407298 RNF167Q9H6Y7 350 aa9.33□□□□□ -0.92
APOBEC3B-204ENST00000407298 RETNQ9HD89 108 aa9.33□□□□□ -0.92
APOBEC3B-204ENST00000407298 RAB22AQ9UL26 194 aa9.33□□□□□ -0.92
APOBEC3B-204ENST00000407298 ALMS1Q8TCU4 4167 aa9.33□□□□□ -0.92
APOBEC3B-204ENST00000407298 SCTP09683 121 aa9.32□□□□□ -0.92
APOBEC3B-204ENST00000407298 RAB6AP20340 208 aa9.32□□□□□ -0.92
APOBEC3B-204ENST00000407298 NEDD8Q15843 81 aa9.32□□□□□ -0.92
APOBEC3B-204ENST00000407298 ZNF343Q6P1L6 599 aa9.32□□□□□ -0.92
APOBEC3B-204ENST00000407298 OR10R2Q8NGX6 335 aa9.32□□□□□ -0.92
APOBEC3B-204ENST00000407298 AGMATQ9BSE5 352 aa9.32□□□□□ -0.92
APOBEC3B-204ENST00000407298 PLEKHA3Q9HB20 300 aa9.32□□□□□ -0.92
APOBEC3B-204ENST00000407298 RBMY1BA6NDE4 496 aaKnown RBP9.31□□□□□ -0.92
APOBEC3B-204ENST00000407298 RBMY1EA6NEQ0 496 aaKnown RBP9.31□□□□□ -0.92
APOBEC3B-204ENST00000407298 NOTOA8MTQ0 251 aa9.31□□□□□ -0.92
APOBEC3B-204ENST00000407298 PROP1O75360 226 aa9.31□□□□□ -0.92
APOBEC3B-204ENST00000407298 LY6G6CO95867 125 aa9.31□□□□□ -0.92
APOBEC3B-204ENST00000407298 APOA2P02652 100 aa9.31□□□□□ -0.92
APOBEC3B-204ENST00000407298 FCGR3AP08637 254 aa9.31□□□□□ -0.92
APOBEC3B-204ENST00000407298 CLEC2LP0C7M8 214 aa9.31□□□□□ -0.92
APOBEC3B-204ENST00000407298 RBMY1DP0C7P1 496 aaKnown RBP9.31□□□□□ -0.92
APOBEC3B-204ENST00000407298 GNB3P16520 340 aa9.31□□□□□ -0.92
APOBEC3B-204ENST00000407298 GADD45AP24522 165 aa9.31□□□□□ -0.92
APOBEC3B-204ENST00000407298 MECP2P51608 486 aaKnown RBP9.31□□□□□ -0.92
APOBEC3B-204ENST00000407298 PDPNQ86YL7 162 aa9.31□□□□□ -0.92
APOBEC3B-204ENST00000407298 BVESQ8NE79 360 aa9.31□□□□□ -0.92
APOBEC3B-204ENST00000407298 DDB2Q92466 427 aa9.31□□□□□ -0.92
APOBEC3B-204ENST00000407298 PTX4Q96A99 478 aa9.31□□□□□ -0.92
APOBEC3B-204ENST00000407298 RAB3CQ96E17 227 aa9.31□□□□□ -0.92
APOBEC3B-204ENST00000407298 CMSS1Q9BQ75 279 aaKnown RBP9.31□□□□□ -0.92
APOBEC3B-204ENST00000407298 TINAGL1Q9GZM7 467 aaPredicted RBP9.31□□□□□ -0.92
APOBEC3B-204ENST00000407298 ZNF221Q9UK13 617 aa9.31□□□□□ -0.92
APOBEC3B-204ENST00000407298 ELF5Q9UKW6 265 aaPredicted RBP9.31□□□□□ -0.92
APOBEC3B-204ENST00000407298 MGAT4AQ9UM21 535 aa9.31□□□□□ -0.92
APOBEC3B-204ENST00000407298 IZUMO1RA6ND01 250 aa9.3□□□□□ -0.92
APOBEC3B-204ENST00000407298 OR11H12B2RN74 326 aa9.3□□□□□ -0.92
APOBEC3B-204ENST00000407298 HIST1H1DP16402 221 aaKnown RBP9.3□□□□□ -0.92
APOBEC3B-204ENST00000407298 ZBTB25P24278 435 aa9.3□□□□□ -0.92
APOBEC3B-204ENST00000407298 SFXN4Q6P4A7 337 aa9.3□□□□□ -0.92
APOBEC3B-204ENST00000407298 DYNLRB2Q8TF09 96 aa9.3□□□□□ -0.92
APOBEC3B-204ENST00000407298 MAFIPQ8WZ33 124 aa9.3□□□□□ -0.92
APOBEC3B-204ENST00000407298 ABHD14BQ96IU4 210 aa9.3□□□□□ -0.92
APOBEC3B-204ENST00000407298 CABLES2Q9BTV7 478 aa9.3□□□□□ -0.92
APOBEC3B-204ENST00000407298 CENPOQ9BU64 300 aa9.3□□□□□ -0.92
APOBEC3B-204ENST00000407298 C11orf54Q9H0W9 315 aaPredicted RBP9.3□□□□□ -0.92
APOBEC3B-204ENST00000407298 IGKV1D-8A0A087WSZ0 117 aa9.29□□□□□ -0.92
APOBEC3B-204ENST00000407298 TRDCB7Z8K6 153 aa9.29□□□□□ -0.92
APOBEC3B-204ENST00000407298 IGKV1-16P04430 117 aa9.29□□□□□ -0.92
APOBEC3B-204ENST00000407298 CD3GP09693 182 aa9.29□□□□□ -0.92
APOBEC3B-204ENST00000407298 SNRPBP14678 240 aaKnown RBP9.29□□□□□ -0.92
APOBEC3B-204ENST00000407298 CD36P16671 472 aa9.29□□□□□ -0.92
APOBEC3B-204ENST00000407298 SDC2P34741 201 aa9.29□□□□□ -0.92
APOBEC3B-204ENST00000407298 TGFBR1P36897 503 aa9.29□□□□□ -0.92
APOBEC3B-204ENST00000407298 CEACAM6P40199 344 aa9.29□□□□□ -0.92
APOBEC3B-204ENST00000407298 CBX3Q13185 183 aa9.29□□□□□ -0.92
APOBEC3B-204ENST00000407298 FAM209BQ5JX69 171 aa9.29□□□□□ -0.92
APOBEC3B-204ENST00000407298 TPRA1Q86W33 373 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms