RNA–Protein interactions for RNA: ENST00000395098.5

VPS26A-203, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5 BASIC

Gene VPS26A, Length 2,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-203ENST00000395098 CD300LFQ8TDQ1 290 aa10.64□□□□□ -0.71
VPS26A-203ENST00000395098 LSM10Q969L4 123 aaKnown RBP10.64□□□□□ -0.71
VPS26A-203ENST00000395098 NABP2Q9BQ15 211 aa10.64□□□□□ -0.71
VPS26A-203ENST00000395098 COMMD9Q9P000 198 aa10.64□□□□□ -0.71
VPS26A-203ENST00000395098 MBD2Q9UBB5 411 aa10.64□□□□□ -0.71
VPS26A-203ENST00000395098 WNK2Q9Y3S1 2297 aa10.63□□□□□ -0.71
VPS26A-203ENST00000395098 ODF3BA8MYP8 253 aa10.63□□□□□ -0.71
VPS26A-203ENST00000395098 H0YJW9 148 aa10.63□□□□□ -0.71
VPS26A-203ENST00000395098 LY6LH3BQJ8 138 aa10.63□□□□□ -0.71
VPS26A-203ENST00000395098 RBFOX2O43251 390 aaKnown RBP eCLIP10.63□□□□□ -0.71
VPS26A-203ENST00000395098 CRYZL1O95825 349 aa10.63□□□□□ -0.71
VPS26A-203ENST00000395098 SCGB1D2O95969 90 aa10.63□□□□□ -0.71
VPS26A-203ENST00000395098 HPRT1P00492 218 aa10.63□□□□□ -0.71
VPS26A-203ENST00000395098 PAX6P26367 422 aa10.63□□□□□ -0.71
VPS26A-203ENST00000395098 S100A10P60903 97 aa10.63□□□□□ -0.71
VPS26A-203ENST00000395098 LHFPL4Q7Z7J7 247 aa10.63□□□□□ -0.71
VPS26A-203ENST00000395098 RNASE11Q8TAA1 199 aaKnown RBP10.63□□□□□ -0.71
VPS26A-203ENST00000395098 ADTRPQ96IZ2 230 aa10.63□□□□□ -0.71
VPS26A-203ENST00000395098 HEXA-AS1Q9H8Q6 139 aa10.63□□□□□ -0.71
VPS26A-203ENST00000395098 OR5AC2Q9NZP5 309 aa10.63□□□□□ -0.71
VPS26A-203ENST00000395098 UNC79Q9P2D8 2635 aa10.63□□□□□ -0.71
VPS26A-203ENST00000395098 MARCH11A6NNE9 402 aa10.63□□□□□ -0.71
VPS26A-203ENST00000395098 CXorf66Q5JRM2 361 aaPredicted RBP10.63□□□□□ -0.71
VPS26A-203ENST00000395098 FAM71F2Q6NXP2 309 aa10.63□□□□□ -0.71
VPS26A-203ENST00000395098 TGIF2LXQ8IUE1 241 aa10.63□□□□□ -0.71
VPS26A-203ENST00000395098 OR5AN1Q8NGI8 311 aa10.63□□□□□ -0.71
VPS26A-203ENST00000395098 R3HDM4Q96D70 268 aa10.63□□□□□ -0.71
VPS26A-203ENST00000395098 PLEKHA2Q9HB19 425 aa10.63□□□□□ -0.71
VPS26A-203ENST00000395098 SLC35D1Q9NTN3 355 aa10.63□□□□□ -0.71
VPS26A-203ENST00000395098 CACNG5Q9UF02 275 aa10.63□□□□□ -0.71
VPS26A-203ENST00000395098 HECTD1Q9ULT8 2610 aa10.63□□□□□ -0.71
VPS26A-203ENST00000395098 RNF223E7ERA6 249 aa10.62□□□□□ -0.71
VPS26A-203ENST00000395098 ARPC5O15511 151 aa10.62□□□□□ -0.71
VPS26A-203ENST00000395098 PITX3O75364 302 aa10.62□□□□□ -0.71
VPS26A-203ENST00000395098 PAX8Q06710 450 aa10.62□□□□□ -0.71
VPS26A-203ENST00000395098 FGL1Q08830 312 aa10.62□□□□□ -0.71
VPS26A-203ENST00000395098 LGALSLQ3ZCW2 172 aaPredicted RBP10.62□□□□□ -0.71
VPS26A-203ENST00000395098 SSX9Q7RTT3 188 aa10.62□□□□□ -0.71
VPS26A-203ENST00000395098 OR4S2Q8NH73 311 aa10.62□□□□□ -0.71
VPS26A-203ENST00000395098 RRNAD1Q96FB5 475 aaKnown RBP10.62□□□□□ -0.71
VPS26A-203ENST00000395098 MMP24Q9Y5R2 645 aa10.62□□□□□ -0.71
VPS26A-203ENST00000395098 IGHV3-72A0A0B4J1Y9 119 aa10.62□□□□□ -0.71
VPS26A-203ENST00000395098 CXCL2P19875 107 aa10.62□□□□□ -0.71
VPS26A-203ENST00000395098 IL3RAP26951 378 aa10.62□□□□□ -0.71
VPS26A-203ENST00000395098 KIR2DS2P43631 304 aa10.62□□□□□ -0.71
VPS26A-203ENST00000395098 C17orf50Q8WW18 174 aa10.62□□□□□ -0.71
VPS26A-203ENST00000395098 LSM5Q9Y4Y9 91 aaKnown RBP10.62□□□□□ -0.71
VPS26A-203ENST00000395098 A0A1B0GU03 582 aa10.61□□□□□ -0.71
VPS26A-203ENST00000395098 SRRM4A7MD48 611 aaKnown RBP10.61□□□□□ -0.71
VPS26A-203ENST00000395098 K7EPK0 472 aa10.61□□□□□ -0.71
VPS26A-203ENST00000395098 MSMBP08118 114 aa10.61□□□□□ -0.71
VPS26A-203ENST00000395098 SLC25A4P12235 298 aa10.61□□□□□ -0.71
VPS26A-203ENST00000395098 MIDNQ504T8 468 aa10.61□□□□□ -0.71
VPS26A-203ENST00000395098 FAM71E2Q8N5Q1 922 aa10.61□□□□□ -0.71
VPS26A-203ENST00000395098 OR1S1Q8NH92 325 aa10.61□□□□□ -0.71
VPS26A-203ENST00000395098 LHX4Q969G2 390 aa10.61□□□□□ -0.71
VPS26A-203ENST00000395098 SPIN2AQ99865 258 aa10.61□□□□□ -0.71
VPS26A-203ENST00000395098 SPIN2BQ9BPZ2 258 aa10.61□□□□□ -0.71
VPS26A-203ENST00000395098 NSG2Q9Y328 171 aa10.61□□□□□ -0.71
VPS26A-203ENST00000395098 HSPB11Q9Y547 144 aa10.61□□□□□ -0.71
VPS26A-203ENST00000395098 PDZD2O15018 2839 aa10.61□□□□□ -0.71
VPS26A-203ENST00000395098 OR9G9P0C7N8 305 aa10.61□□□□□ -0.71
VPS26A-203ENST00000395098 SMCO1Q147U7 214 aa10.61□□□□□ -0.71
VPS26A-203ENST00000395098 THOC7Q6I9Y2 204 aaKnown RBP10.61□□□□□ -0.71
VPS26A-203ENST00000395098 THAP6Q8TBB0 222 aa10.61□□□□□ -0.71
VPS26A-203ENST00000395098 Q96MF0 132 aa10.61□□□□□ -0.71
VPS26A-203ENST00000395098 MAGT1Q9H0U3 335 aa10.61□□□□□ -0.71
VPS26A-203ENST00000395098 RCL1Q9Y2P8 373 aaKnown RBP10.61□□□□□ -0.71
VPS26A-203ENST00000395098 TRAV3A0A0B4J244 114 aa10.6□□□□□ -0.71
VPS26A-203ENST00000395098 IGHV1-3A0A0C4DH29 117 aa10.6□□□□□ -0.71
VPS26A-203ENST00000395098 H7C2Y5 167 aa10.6□□□□□ -0.71
VPS26A-203ENST00000395098 SLC25A6P12236 298 aa10.6□□□□□ -0.71
VPS26A-203ENST00000395098 HTR1DP28221 377 aa10.6□□□□□ -0.71
VPS26A-203ENST00000395098 POLR2GP62487 172 aaKnown RBP eCLIP10.6□□□□□ -0.71
VPS26A-203ENST00000395098 TPTE2P1Q5T6R2 138 aa10.6□□□□□ -0.71
VPS26A-203ENST00000395098 PRSS54Q6PEW0 395 aa10.6□□□□□ -0.71
VPS26A-203ENST00000395098 ZNF546Q86UE3 836 aa10.6□□□□□ -0.71
VPS26A-203ENST00000395098 DYNAPQ8N1N2 210 aa10.6□□□□□ -0.71
VPS26A-203ENST00000395098 RPEQ96AT9 228 aa10.6□□□□□ -0.71
VPS26A-203ENST00000395098 RITA1Q96K30 269 aa10.6□□□□□ -0.71
VPS26A-203ENST00000395098 REG4Q9BYZ8 158 aa10.6□□□□□ -0.71
VPS26A-203ENST00000395098 AMMECR1Q9Y4X0 333 aaPredicted RBP10.6□□□□□ -0.71
VPS26A-203ENST00000395098 HILPDAQ9Y5L2 63 aa10.6□□□□□ -0.71
VPS26A-203ENST00000395098 PIGBOS1A0A0B4J2F0 54 aa10.6□□□□□ -0.71
VPS26A-203ENST00000395098 HMSDA8MTL9 139 aa10.6□□□□□ -0.71
VPS26A-203ENST00000395098 B4DSR2 109 aa10.6□□□□□ -0.71
VPS26A-203ENST00000395098 DEDDO75618 318 aa10.6□□□□□ -0.71
VPS26A-203ENST00000395098 GAPDHP04406 335 aaKnown RBP10.6□□□□□ -0.71
VPS26A-203ENST00000395098 LYL1P12980 280 aa10.6□□□□□ -0.71
VPS26A-203ENST00000395098 NQO2P16083 231 aa10.6□□□□□ -0.71
VPS26A-203ENST00000395098 NKX2-1P43699 371 aaPredicted RBP10.6□□□□□ -0.71
VPS26A-203ENST00000395098 ID3Q02535 119 aa10.6□□□□□ -0.71
VPS26A-203ENST00000395098 RTL8BQ17RB0 113 aa10.6□□□□□ -0.71
VPS26A-203ENST00000395098 H2BFWTQ7Z2G1 175 aa10.6□□□□□ -0.71
VPS26A-203ENST00000395098 DMBX1Q8NFW5 382 aa10.6□□□□□ -0.71
VPS26A-203ENST00000395098 C1orf159Q96HA4 380 aa10.6□□□□□ -0.71
VPS26A-203ENST00000395098 DPM3Q9P2X0 92 aa10.6□□□□□ -0.71
VPS26A-203ENST00000395098 TNFSF18Q9UNG2 199 aa10.6□□□□□ -0.71
VPS26A-203ENST00000395098 ITPR2Q14571 2701 aa10.59□□□□□ -0.71
VPS26A-203ENST00000395098 A0A1W2PPI3 338 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms