RNA–Protein interactions for RNA: ENST00000394986.5

SNCA-203, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,420 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-203ENST00000394986 RABL2AQ9UBK7 228 aaPredicted RBP15.71■□□□□ 0.11
SNCA-203ENST00000394986 RABL2BQ9UNT1 228 aa15.71■□□□□ 0.11
SNCA-203ENST00000394986 SRRM4A7MD48 611 aaKnown RBP15.7■□□□□ 0.1
SNCA-203ENST00000394986 SHOXO15266 292 aa15.7■□□□□ 0.1
SNCA-203ENST00000394986 FBXO24O75426 580 aa15.7■□□□□ 0.1
SNCA-203ENST00000394986 HLA-DRB1P01911 266 aa15.7■□□□□ 0.1
SNCA-203ENST00000394986 BRWD1-AS2P59051 145 aa15.7■□□□□ 0.1
SNCA-203ENST00000394986 TAGLNQ01995 201 aaKnown RBP15.7■□□□□ 0.1
SNCA-203ENST00000394986 CBX3Q13185 183 aa15.7■□□□□ 0.1
SNCA-203ENST00000394986 MSMO1Q15800 293 aa15.7■□□□□ 0.1
SNCA-203ENST00000394986 TMEM177Q53S58 311 aa15.7■□□□□ 0.1
SNCA-203ENST00000394986 LIN54Q6MZP7 749 aa15.7■□□□□ 0.1
SNCA-203ENST00000394986 ZNF329Q86UD4 541 aa15.7■□□□□ 0.1
SNCA-203ENST00000394986 FOXRED2Q8IWF2 684 aa15.7■□□□□ 0.1
SNCA-203ENST00000394986 OR5AU1Q8NGC0 362 aa15.7■□□□□ 0.1
SNCA-203ENST00000394986 HSD17B10Q99714 261 aaKnown RBP15.7■□□□□ 0.1
SNCA-203ENST00000394986 IGHV7-81A0A0B4J1V7 117 aa15.69■□□□□ 0.1
SNCA-203ENST00000394986 GSTZ1O43708 216 aaPredicted RBP15.69■□□□□ 0.1
SNCA-203ENST00000394986 RRASP10301 218 aa15.69■□□□□ 0.1
SNCA-203ENST00000394986 TAS2R19P59542 299 aa15.69■□□□□ 0.1
SNCA-203ENST00000394986 NDPQ00604 133 aa15.69■□□□□ 0.1
SNCA-203ENST00000394986 ZNF79Q15937 498 aa15.69■□□□□ 0.1
SNCA-203ENST00000394986 STEAP1BQ6NZ63 245 aa15.69■□□□□ 0.1
SNCA-203ENST00000394986 ZNF66Q6ZN08 573 aa15.69■□□□□ 0.1
SNCA-203ENST00000394986 CCDC190Q86UF4 302 aa15.69■□□□□ 0.1
SNCA-203ENST00000394986 STPG2Q8N412 459 aa15.69■□□□□ 0.1
SNCA-203ENST00000394986 OR6Q1Q8NGQ2 317 aa15.69■□□□□ 0.1
SNCA-203ENST00000394986 PRELID3BQ9Y3B1 194 aa15.69■□□□□ 0.1
SNCA-203ENST00000394986 PSMB11A5LHX3 300 aa15.68■□□□□ 0.1
SNCA-203ENST00000394986 AP4M1O00189 453 aa15.68■□□□□ 0.1
SNCA-203ENST00000394986 KCNAB3O43448 404 aa15.68■□□□□ 0.1
SNCA-203ENST00000394986 SPDEFO95238 335 aa15.68■□□□□ 0.1
SNCA-203ENST00000394986 RAB3DO95716 219 aa15.68■□□□□ 0.1
SNCA-203ENST00000394986 CD74P04233 296 aa15.68■□□□□ 0.1
SNCA-203ENST00000394986 IFNA6P05013 189 aa15.68■□□□□ 0.1
SNCA-203ENST00000394986 SSBP1Q04837 148 aaKnown RBP15.68■□□□□ 0.1
SNCA-203ENST00000394986 PYDC2Q56P42 97 aa15.68■□□□□ 0.1
SNCA-203ENST00000394986 TCTEX1D4Q5JR98 221 aa15.68■□□□□ 0.1
SNCA-203ENST00000394986 AADACL3Q5VUY0 350 aa15.68■□□□□ 0.1
SNCA-203ENST00000394986 ZBTB34Q8NCN2 500 aa15.68■□□□□ 0.1
SNCA-203ENST00000394986 OR51H1Q8NH63 302 aa15.68■□□□□ 0.1
SNCA-203ENST00000394986 PARP11Q9NR21 331 aa15.68■□□□□ 0.1
SNCA-203ENST00000394986 ATP6V0E1O15342 81 aa15.68■□□□□ 0.1
SNCA-203ENST00000394986 TBPP20226 339 aa15.68■□□□□ 0.1
SNCA-203ENST00000394986 LGALS7P47929 136 aa15.68■□□□□ 0.1
SNCA-203ENST00000394986 CX3CL1P78423 397 aa15.68■□□□□ 0.1
SNCA-203ENST00000394986 PJVKQ0ZLH3 352 aa15.68■□□□□ 0.1
SNCA-203ENST00000394986 IDO2Q6ZQW0 420 aa15.68■□□□□ 0.1
SNCA-203ENST00000394986 CHPT1Q8WUD6 406 aa15.68■□□□□ 0.1
SNCA-203ENST00000394986 CITED2Q99967 270 aaPredicted RBP15.68■□□□□ 0.1
SNCA-203ENST00000394986 OR51J1Q9H342 316 aa15.68■□□□□ 0.1
SNCA-203ENST00000394986 FBXO7Q9Y3I1 522 aa15.68■□□□□ 0.1
SNCA-203ENST00000394986 A6NHS1 94 aa15.67■□□□□ 0.1
SNCA-203ENST00000394986 RAMP3O60896 148 aa15.67■□□□□ 0.1
SNCA-203ENST00000394986 CA2P00918 260 aa15.67■□□□□ 0.1
SNCA-203ENST00000394986 RLN1P04808 185 aa15.67■□□□□ 0.1
SNCA-203ENST00000394986 CRYGBP07316 175 aa15.67■□□□□ 0.1
SNCA-203ENST00000394986 CSF1P09603 554 aa15.67■□□□□ 0.1
SNCA-203ENST00000394986 PHLDA2Q53GA4 152 aa15.67■□□□□ 0.1
SNCA-203ENST00000394986 LHFPL1Q86WI0 220 aa15.67■□□□□ 0.1
SNCA-203ENST00000394986 SPAG16Q8N0X2 631 aa15.67■□□□□ 0.1
SNCA-203ENST00000394986 ARRDC1Q8N5I2 433 aa15.67■□□□□ 0.1
SNCA-203ENST00000394986 OR4S2Q8NH73 311 aa15.67■□□□□ 0.1
SNCA-203ENST00000394986 WSB1Q9Y6I7 421 aa15.67■□□□□ 0.1
SNCA-203ENST00000394986 GPR31O00270 319 aa15.66■□□□□ 0.1
SNCA-203ENST00000394986 PGLYRP1O75594 196 aaPredicted RBP15.66■□□□□ 0.1
SNCA-203ENST00000394986 ZNF735P0CB33 412 aa15.66■□□□□ 0.1
SNCA-203ENST00000394986 SAA1P0DJI8 122 aaPredicted RBP15.66■□□□□ 0.1
SNCA-203ENST00000394986 PPP5CP53041 499 aa15.66■□□□□ 0.1
SNCA-203ENST00000394986 CATR1Q13166 79 aa15.66■□□□□ 0.1
SNCA-203ENST00000394986 SCGB2B2Q4G0G5 96 aa15.66■□□□□ 0.1
SNCA-203ENST00000394986 VKORC1L1Q8N0U8 176 aa15.66■□□□□ 0.1
SNCA-203ENST00000394986 OR4C16Q8NGL9 310 aa15.66■□□□□ 0.1
SNCA-203ENST00000394986 OSR1Q8TAX0 266 aaPredicted RBP15.66■□□□□ 0.1
SNCA-203ENST00000394986 THAP7Q9BT49 309 aaPredicted RBP15.66■□□□□ 0.1
SNCA-203ENST00000394986 ANKRD20A5PA0PJZ0 165 aa15.65■□□□□ 0.1
SNCA-203ENST00000394986 G3V318 75 aa15.65■□□□□ 0.1
SNCA-203ENST00000394986 IGF1P05019 195 aa15.65■□□□□ 0.1
SNCA-203ENST00000394986 AKAIN1P0CW23 69 aa15.65■□□□□ 0.1
SNCA-203ENST00000394986 GNB1P62873 340 aa15.65■□□□□ 0.1
SNCA-203ENST00000394986 SSBP2P81877 361 aaPredicted RBP15.65■□□□□ 0.1
SNCA-203ENST00000394986 NSUN5P1Q3KNT7 163 aa15.65■□□□□ 0.1
SNCA-203ENST00000394986 VMA21Q3ZAQ7 101 aa15.65■□□□□ 0.1
SNCA-203ENST00000394986 Q8N402 240 aa15.65■□□□□ 0.1
SNCA-203ENST00000394986 OR4X2Q8NGF9 303 aa15.65■□□□□ 0.1
SNCA-203ENST00000394986 ABHD5Q8WTS1 349 aa15.65■□□□□ 0.1
SNCA-203ENST00000394986 FAM103A1Q9BTL3 118 aaKnown RBP15.65■□□□□ 0.1
SNCA-203ENST00000394986 RSRP1Q9BUV0 290 aa15.65■□□□□ 0.1
SNCA-203ENST00000394986 TRRAPQ9Y4A5 3859 aa15.64■□□□□ 0.09
SNCA-203ENST00000394986 A0A1W2PRX2 142 aa15.64■□□□□ 0.09
SNCA-203ENST00000394986 TSPAN15O95858 294 aa15.64■□□□□ 0.09
SNCA-203ENST00000394986 PGAM2P15259 253 aa15.64■□□□□ 0.09
SNCA-203ENST00000394986 PI3P19957 117 aa15.64■□□□□ 0.09
SNCA-203ENST00000394986 VDAC1P21796 283 aa15.64■□□□□ 0.09
SNCA-203ENST00000394986 UCP3P55916 312 aa15.64■□□□□ 0.09
SNCA-203ENST00000394986 UBE2KP61086 200 aa15.64■□□□□ 0.09
SNCA-203ENST00000394986 CD83Q01151 205 aa15.64■□□□□ 0.09
SNCA-203ENST00000394986 MRGPRG-AS1Q2M3A8 158 aa15.64■□□□□ 0.09
SNCA-203ENST00000394986 SPANXN2Q5MJ10 180 aa15.64■□□□□ 0.09
SNCA-203ENST00000394986 PPP1R27Q86WC6 154 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms