RNA–Protein interactions for RNA: ENST00000391970.3

PTPRC-205, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 408 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-205ENST00000391970 SPIN4Q56A73 249 aa1.88□□□□□ -2.11
PTPRC-205ENST00000391970 TMEM69Q5SWH9 247 aa1.88□□□□□ -2.11
PTPRC-205ENST00000391970 COL5A1-AS1Q5SY13 56 aa1.88□□□□□ -2.11
PTPRC-205ENST00000391970 C1orf194Q5T5A4 169 aa1.88□□□□□ -2.11
PTPRC-205ENST00000391970 Q5W150 140 aa1.88□□□□□ -2.11
PTPRC-205ENST00000391970 GLYATQ6IB77 296 aa1.88□□□□□ -2.11
PTPRC-205ENST00000391970 LAIR2Q6ISS4 152 aa1.88□□□□□ -2.11
PTPRC-205ENST00000391970 TMEM205Q6UW68 189 aa1.88□□□□□ -2.11
PTPRC-205ENST00000391970 NTM-AS1Q6ZSK4 140 aa1.88□□□□□ -2.11
PTPRC-205ENST00000391970 RASSF6Q6ZTQ3 369 aa1.88□□□□□ -2.11
PTPRC-205ENST00000391970 DEFB128Q7Z7B8 93 aa1.88□□□□□ -2.11
PTPRC-205ENST00000391970 MRPL55Q7Z7F7 128 aaKnown RBP1.88□□□□□ -2.11
PTPRC-205ENST00000391970 NAA40Q86UY6 237 aa1.88□□□□□ -2.11
PTPRC-205ENST00000391970 TMEM25Q86YD3 366 aa1.88□□□□□ -2.11
PTPRC-205ENST00000391970 APRG1Q8IVJ8 170 aa1.88□□□□□ -2.11
PTPRC-205ENST00000391970 PDZD9Q8IXQ8 264 aa1.88□□□□□ -2.11
PTPRC-205ENST00000391970 ZFP82Q8N141 532 aa1.88□□□□□ -2.11
PTPRC-205ENST00000391970 LGI3Q8N145 548 aa1.88□□□□□ -2.11
PTPRC-205ENST00000391970 CA13Q8N1Q1 262 aa1.88□□□□□ -2.11
PTPRC-205ENST00000391970 UBAC2Q8NBM4 344 aa1.88□□□□□ -2.11
PTPRC-205ENST00000391970 C11orf72Q8NBR9 251 aa1.88□□□□□ -2.11
PTPRC-205ENST00000391970 OR11H7Q8NGC8 314 aa1.88□□□□□ -2.11
PTPRC-205ENST00000391970 OR10W1Q8NGF6 305 aa1.88□□□□□ -2.11
PTPRC-205ENST00000391970 OR4D6Q8NGJ1 314 aa1.88□□□□□ -2.11
PTPRC-205ENST00000391970 OR4P4Q8NGL7 312 aa1.88□□□□□ -2.11
PTPRC-205ENST00000391970 OR13C4Q8NGS5 318 aa1.88□□□□□ -2.11
PTPRC-205ENST00000391970 COQ8AQ8NI60 647 aa1.88□□□□□ -2.11
PTPRC-205ENST00000391970 UBALD1Q8TB05 177 aa1.88□□□□□ -2.11
PTPRC-205ENST00000391970 OR51E1Q8TCB6 317 aa1.88□□□□□ -2.11
PTPRC-205ENST00000391970 PIFOQ8TCI5 191 aa1.88□□□□□ -2.11
PTPRC-205ENST00000391970 ASB17Q8WXJ9 295 aa1.88□□□□□ -2.11
PTPRC-205ENST00000391970 RORBQ92753 470 aa1.88□□□□□ -2.11
PTPRC-205ENST00000391970 PTH2Q96A98 100 aa1.88□□□□□ -2.11
PTPRC-205ENST00000391970 RCN3Q96D15 328 aa1.88□□□□□ -2.11
PTPRC-205ENST00000391970 CENPNQ96H22 339 aaPredicted RBP1.88□□□□□ -2.11
PTPRC-205ENST00000391970 REEP6Q96HR9 211 aa1.88□□□□□ -2.11
PTPRC-205ENST00000391970 KLF6Q99612 283 aaPredicted RBP1.88□□□□□ -2.11
PTPRC-205ENST00000391970 C7orf50Q9BRJ6 194 aaKnown RBP1.88□□□□□ -2.11
PTPRC-205ENST00000391970 MED10Q9BTT4 135 aa1.88□□□□□ -2.11
PTPRC-205ENST00000391970 TAPBPLQ9BX59 468 aa1.88□□□□□ -2.11
PTPRC-205ENST00000391970 MS4A8Q9BY19 250 aa1.88□□□□□ -2.11
PTPRC-205ENST00000391970 PRRG3Q9BZD7 231 aa1.88□□□□□ -2.11
PTPRC-205ENST00000391970 GABARAPL1Q9H0R8 117 aa1.88□□□□□ -2.11
PTPRC-205ENST00000391970 OR2AG1Q9H205 316 aa1.88□□□□□ -2.11
PTPRC-205ENST00000391970 ABCG5Q9H222 651 aa1.88□□□□□ -2.11
PTPRC-205ENST00000391970 EDA2RQ9HAV5 297 aa1.88□□□□□ -2.11
PTPRC-205ENST00000391970 EXOSC4Q9NPD3 245 aaKnown RBP1.88□□□□□ -2.11
PTPRC-205ENST00000391970 OR2S2Q9NQN1 319 aa1.88□□□□□ -2.11
PTPRC-205ENST00000391970 TMEM100Q9NV29 134 aa1.88□□□□□ -2.11
PTPRC-205ENST00000391970 TMEM38BQ9NVV0 291 aa1.88□□□□□ -2.11
PTPRC-205ENST00000391970 ZNRD1Q9P1U0 126 aa1.88□□□□□ -2.11
PTPRC-205ENST00000391970 MTFP1Q9UDX5 166 aa1.88□□□□□ -2.11
PTPRC-205ENST00000391970 PRO0461Q9UI25 63 aa1.88□□□□□ -2.11
PTPRC-205ENST00000391970 MRM2Q9UI43 246 aaKnown RBP1.88□□□□□ -2.11
PTPRC-205ENST00000391970 JPT1Q9UK76 154 aa1.88□□□□□ -2.11
PTPRC-205ENST00000391970 RCL1Q9Y2P8 373 aaKnown RBP1.88□□□□□ -2.11
PTPRC-205ENST00000391970 YTHDF2Q9Y5A9 579 aaKnown RBP1.88□□□□□ -2.11
PTPRC-205ENST00000391970 ARID1AO14497 2285 aa1.88□□□□□ -2.11
PTPRC-205ENST00000391970 TMEM131Q92545 1883 aa1.88□□□□□ -2.11
PTPRC-205ENST00000391970 TRPM7Q96QT4 1865 aa1.88□□□□□ -2.11
PTPRC-205ENST00000391970 ARFGEF1Q9Y6D6 1849 aa1.87□□□□□ -2.11
PTPRC-205ENST00000391970 A0A087WWC5 75 aa1.87□□□□□ -2.11
PTPRC-205ENST00000391970 A0A0U1RQV1 116 aa1.87□□□□□ -2.11
PTPRC-205ENST00000391970 TSPAN11A1L157 253 aa1.87□□□□□ -2.11
PTPRC-205ENST00000391970 IGSF23A1L1A6 192 aa1.87□□□□□ -2.11
PTPRC-205ENST00000391970 IFITM5A6NNB3 132 aa1.87□□□□□ -2.11
PTPRC-205ENST00000391970 ZNF705GA8MUZ8 300 aaPredicted RBP1.87□□□□□ -2.11
PTPRC-205ENST00000391970 SMLR1H3BR10 107 aa1.87□□□□□ -2.11
PTPRC-205ENST00000391970 CORTO00230 105 aa1.87□□□□□ -2.11
PTPRC-205ENST00000391970 GPR31O00270 319 aa1.87□□□□□ -2.11
PTPRC-205ENST00000391970 BCKDKO14874 412 aa1.87□□□□□ -2.11
PTPRC-205ENST00000391970 RBFOX2O43251 390 aaKnown RBP eCLIP1.87□□□□□ -2.11
PTPRC-205ENST00000391970 B4GALT5O43286 388 aa1.87□□□□□ -2.11
PTPRC-205ENST00000391970 GCM2O75603 506 aaPredicted RBP1.87□□□□□ -2.11
PTPRC-205ENST00000391970 SCELO95171 688 aa1.87□□□□□ -2.11
PTPRC-205ENST00000391970 C1QAP02745 245 aa1.87□□□□□ -2.11
PTPRC-205ENST00000391970 IFNW1P05000 195 aa1.87□□□□□ -2.11
PTPRC-205ENST00000391970 CD2P06729 351 aa1.87□□□□□ -2.11
PTPRC-205ENST00000391970 CTSLP07711 333 aa1.87□□□□□ -2.11
PTPRC-205ENST00000391970 CISD3P0C7P0 127 aa1.87□□□□□ -2.11
PTPRC-205ENST00000391970 GZMBP10144 247 aa1.87□□□□□ -2.11
PTPRC-205ENST00000391970 CYBAP13498 195 aa1.87□□□□□ -2.11
PTPRC-205ENST00000391970 ZNF35P13682 527 aa1.87□□□□□ -2.11
PTPRC-205ENST00000391970 IL1RNP18510 177 aa1.87□□□□□ -2.11
PTPRC-205ENST00000391970 RAB5AP20339 215 aa1.87□□□□□ -2.11
PTPRC-205ENST00000391970 USF1P22415 310 aaPredicted RBP1.87□□□□□ -2.11
PTPRC-205ENST00000391970 PSMA1P25786 263 aaKnown RBP1.87□□□□□ -2.11
PTPRC-205ENST00000391970 LOXP28300 417 aaPredicted RBP1.87□□□□□ -2.11
PTPRC-205ENST00000391970 RPA3P35244 121 aaPredicted RBP1.87□□□□□ -2.11
PTPRC-205ENST00000391970 TGFBR1P36897 503 aa1.87□□□□□ -2.11
PTPRC-205ENST00000391970 COILP38432 576 aaPredicted RBP1.87□□□□□ -2.11
PTPRC-205ENST00000391970 NBL1P41271 181 aa1.87□□□□□ -2.11
PTPRC-205ENST00000391970 MAP2K4P45985 399 aa1.87□□□□□ -2.11
PTPRC-205ENST00000391970 RAB7AP51149 207 aa1.87□□□□□ -2.11
PTPRC-205ENST00000391970 SYNJ2BPP57105 145 aa1.87□□□□□ -2.11
PTPRC-205ENST00000391970 OR4D2P58180 307 aa1.87□□□□□ -2.11
PTPRC-205ENST00000391970 TPI1P60174 286 aa1.87□□□□□ -2.11
PTPRC-205ENST00000391970 RAB8AP61006 207 aa1.87□□□□□ -2.11
PTPRC-205ENST00000391970 UBE2MP61081 183 aaKnown RBP1.87□□□□□ -2.11
PTPRC-205ENST00000391970 NCS1P62166 190 aa1.87□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms