RNA–Protein interactions for RNA: ENST00000377349.6

CBWD3-204, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,403 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-204ENST00000377349 SHOXO15266 292 aa14.77□□□□□ -0.04
CBWD3-204ENST00000377349 SAP30O75446 220 aa14.77□□□□□ -0.04
CBWD3-204ENST00000377349 SPDEFO95238 335 aa14.77□□□□□ -0.04
CBWD3-204ENST00000377349 TRGV3P03979 118 aa14.77□□□□□ -0.04
CBWD3-204ENST00000377349 EGR2P11161 476 aaPredicted RBP14.77□□□□□ -0.04
CBWD3-204ENST00000377349 SPNP16150 400 aa14.77□□□□□ -0.04
CBWD3-204ENST00000377349 GALP22466 123 aa14.77□□□□□ -0.04
CBWD3-204ENST00000377349 NEDD8Q15843 81 aa14.77□□□□□ -0.04
CBWD3-204ENST00000377349 RTL8BQ17RB0 113 aa14.77□□□□□ -0.04
CBWD3-204ENST00000377349 TCTEX1D1Q8N7M0 179 aa14.77□□□□□ -0.04
CBWD3-204ENST00000377349 LGALS14Q8TCE9 139 aa14.77□□□□□ -0.04
CBWD3-204ENST00000377349 NUDCD2Q8WVJ2 157 aa14.77□□□□□ -0.04
CBWD3-204ENST00000377349 OR51E2Q9H255 320 aa14.77□□□□□ -0.04
CBWD3-204ENST00000377349 IGHV4OR15-8A0A075B7B6 117 aa14.76□□□□□ -0.05
CBWD3-204ENST00000377349 IGKV1D-8A0A087WSZ0 117 aa14.76□□□□□ -0.05
CBWD3-204ENST00000377349 A0A087WW49 117 aa14.76□□□□□ -0.05
CBWD3-204ENST00000377349 LINC01619G3V211 115 aa14.76□□□□□ -0.05
CBWD3-204ENST00000377349 APELAP0DMC3 54 aa14.76□□□□□ -0.05
CBWD3-204ENST00000377349 PJVKQ0ZLH3 352 aa14.76□□□□□ -0.05
CBWD3-204ENST00000377349 PYHIN1Q6K0P9 492 aa14.76□□□□□ -0.05
CBWD3-204ENST00000377349 ZNF562Q6V9R5 426 aa14.76□□□□□ -0.05
CBWD3-204ENST00000377349 OVCH2Q7RTZ1 564 aa14.76□□□□□ -0.05
CBWD3-204ENST00000377349 OR5T1Q8NG75 326 aa14.76□□□□□ -0.05
CBWD3-204ENST00000377349 C5orf30Q96GV9 206 aa14.76□□□□□ -0.05
CBWD3-204ENST00000377349 PHB2Q99623 299 aa14.76□□□□□ -0.05
CBWD3-204ENST00000377349 TOLLIPQ9H0E2 274 aa14.76□□□□□ -0.05
CBWD3-204ENST00000377349 NUBP2Q9Y5Y2 271 aa14.76□□□□□ -0.05
CBWD3-204ENST00000377349 TMEM235A6NFC5 223 aa14.75□□□□□ -0.05
CBWD3-204ENST00000377349 LGALS1P09382 135 aaKnown RBP14.75□□□□□ -0.05
CBWD3-204ENST00000377349 FRMD6-AS1P0C7T7 363 aa14.75□□□□□ -0.05
CBWD3-204ENST00000377349 GNG2P59768 71 aa14.75□□□□□ -0.05
CBWD3-204ENST00000377349 SFXN4Q6P4A7 337 aa14.75□□□□□ -0.05
CBWD3-204ENST00000377349 ZNF773Q6PK81 442 aa14.75□□□□□ -0.05
CBWD3-204ENST00000377349 ARPC1BO15143 372 aaKnown RBP14.75□□□□□ -0.05
CBWD3-204ENST00000377349 FGF9P31371 208 aaPredicted RBP14.75□□□□□ -0.05
CBWD3-204ENST00000377349 SDC2P34741 201 aa14.75□□□□□ -0.05
CBWD3-204ENST00000377349 DEFA5Q01523 94 aa14.75□□□□□ -0.05
CBWD3-204ENST00000377349 ARL6IP1Q15041 203 aa14.75□□□□□ -0.05
CBWD3-204ENST00000377349 AKIRIN2Q53H80 203 aa14.75□□□□□ -0.05
CBWD3-204ENST00000377349 OR2B11Q5JQS5 317 aa14.75□□□□□ -0.05
CBWD3-204ENST00000377349 ACSM6Q6P461 480 aa14.75□□□□□ -0.05
CBWD3-204ENST00000377349 DCUN1D5Q9BTE7 237 aa14.75□□□□□ -0.05
CBWD3-204ENST00000377349 RNF167Q9H6Y7 350 aa14.75□□□□□ -0.05
CBWD3-204ENST00000377349 TRIM64CA6NLI5 447 aa14.74□□□□□ -0.05
CBWD3-204ENST00000377349 CRYZL1O95825 349 aa14.74□□□□□ -0.05
CBWD3-204ENST00000377349 CLEC2LP0C7M8 214 aa14.74□□□□□ -0.05
CBWD3-204ENST00000377349 GP9P14770 177 aa14.74□□□□□ -0.05
CBWD3-204ENST00000377349 NFYAP23511 347 aaPredicted RBP14.74□□□□□ -0.05
CBWD3-204ENST00000377349 IDNKQ5T6J7 187 aa14.74□□□□□ -0.05
CBWD3-204ENST00000377349 HACD4Q5VWC8 232 aa14.74□□□□□ -0.05
CBWD3-204ENST00000377349 TPRA1Q86W33 373 aa14.74□□□□□ -0.05
CBWD3-204ENST00000377349 H1FOOQ8IZA3 346 aaPredicted RBP14.74□□□□□ -0.05
CBWD3-204ENST00000377349 YTHDF1Q9BYJ9 559 aaKnown RBP14.74□□□□□ -0.05
CBWD3-204ENST00000377349 C13orf42A0A1B0GVH6 325 aa14.73□□□□□ -0.05
CBWD3-204ENST00000377349 TUSC2O75896 110 aa14.73□□□□□ -0.05
CBWD3-204ENST00000377349 IGLV2-23P01705 113 aa14.73□□□□□ -0.05
CBWD3-204ENST00000377349 DTYMKP23919 212 aa14.73□□□□□ -0.05
CBWD3-204ENST00000377349 LGALS7P47929 136 aa14.73□□□□□ -0.05
CBWD3-204ENST00000377349 IDO2Q6ZQW0 420 aa14.73□□□□□ -0.05
CBWD3-204ENST00000377349 ACOT12Q8WYK0 555 aa14.73□□□□□ -0.05
CBWD3-204ENST00000377349 SLA2Q9H6Q3 261 aa14.73□□□□□ -0.05
CBWD3-204ENST00000377349 GAR1Q9NY12 217 aaKnown RBP14.73□□□□□ -0.05
CBWD3-204ENST00000377349 COA4Q9NYJ1 87 aa14.73□□□□□ -0.05
CBWD3-204ENST00000377349 ANKRD34BA5PLL1 514 aa14.72□□□□□ -0.05
CBWD3-204ENST00000377349 MPPED1O15442 326 aa14.72□□□□□ -0.05
CBWD3-204ENST00000377349 PITPNAQ00169 270 aa14.72□□□□□ -0.05
CBWD3-204ENST00000377349 TNXAQ16473 311 aa14.72□□□□□ -0.05
CBWD3-204ENST00000377349 VMA21Q3ZAQ7 101 aa14.72□□□□□ -0.05
CBWD3-204ENST00000377349 POC5Q8NA72 575 aa14.72□□□□□ -0.05
CBWD3-204ENST00000377349 CENPOQ9BU64 300 aa14.72□□□□□ -0.05
CBWD3-204ENST00000377349 RSRP1Q9BUV0 290 aa14.72□□□□□ -0.05
CBWD3-204ENST00000377349 RHBDL2Q9NX52 303 aa14.72□□□□□ -0.05
CBWD3-204ENST00000377349 PLECQ15149 4684 aaKnown RBP14.71□□□□□ -0.05
CBWD3-204ENST00000377349 LINC00473A8K010 186 aa14.71□□□□□ -0.05
CBWD3-204ENST00000377349 SCGNO76038 276 aa14.71□□□□□ -0.05
CBWD3-204ENST00000377349 DIRAS3O95661 229 aa14.71□□□□□ -0.05
CBWD3-204ENST00000377349 FCER2P06734 321 aa14.71□□□□□ -0.05
CBWD3-204ENST00000377349 RRASP10301 218 aa14.71□□□□□ -0.05
CBWD3-204ENST00000377349 CD36P16671 472 aa14.71□□□□□ -0.05
CBWD3-204ENST00000377349 DUTP33316 252 aaKnown RBP14.71□□□□□ -0.05
CBWD3-204ENST00000377349 TAGLNQ01995 201 aaKnown RBP14.71□□□□□ -0.05
CBWD3-204ENST00000377349 ADTRPQ96IZ2 230 aa14.71□□□□□ -0.05
CBWD3-204ENST00000377349 SRRM4A7MD48 611 aaKnown RBP14.7□□□□□ -0.06
CBWD3-204ENST00000377349 FCGR3BO75015 233 aa14.7□□□□□ -0.06
CBWD3-204ENST00000377349 HSPB1P04792 205 aaKnown RBP14.7□□□□□ -0.06
CBWD3-204ENST00000377349 TMEM177Q53S58 311 aa14.7□□□□□ -0.06
CBWD3-204ENST00000377349 KCTD9Q7L273 389 aa14.7□□□□□ -0.06
CBWD3-204ENST00000377349 HAPLN4Q86UW8 402 aa14.7□□□□□ -0.06
CBWD3-204ENST00000377349 ZNF645Q8N7E2 425 aa14.7□□□□□ -0.06
CBWD3-204ENST00000377349 OR5H6Q8NGV6 325 aa14.7□□□□□ -0.06
CBWD3-204ENST00000377349 TRAV18A0A075B6X5 111 aa14.69□□□□□ -0.06
CBWD3-204ENST00000377349 ARPC4P59998 168 aa14.69□□□□□ -0.06
CBWD3-204ENST00000377349 SSBP2P81877 361 aaPredicted RBP14.69□□□□□ -0.06
CBWD3-204ENST00000377349 SRSF7Q16629 238 aaKnown RBP eCLIP14.69□□□□□ -0.06
CBWD3-204ENST00000377349 Q6ZS49 121 aa14.69□□□□□ -0.06
CBWD3-204ENST00000377349 OR6Q1Q8NGQ2 317 aa14.69□□□□□ -0.06
CBWD3-204ENST00000377349 OR4C12Q96R67 309 aa14.69□□□□□ -0.06
CBWD3-204ENST00000377349 TM2D3Q9BRN9 247 aa14.69□□□□□ -0.06
CBWD3-204ENST00000377349 SPATA2Q9UM82 520 aa14.69□□□□□ -0.06
CBWD3-204ENST00000377349 OR2W1Q9Y3N9 320 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms