RNA–Protein interactions for RNA: ENST00000370496.3

COL9A1-204, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 1,372 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-204ENST00000370496 OR4S2Q8NH73 311 aa11.75□□□□□ -0.53
COL9A1-204ENST00000370496 GPHA2Q96T91 129 aa11.75□□□□□ -0.53
COL9A1-204ENST00000370496 CITED1Q99966 193 aa11.75□□□□□ -0.53
COL9A1-204ENST00000370496 HSPB9Q9BQS6 159 aa11.75□□□□□ -0.53
COL9A1-204ENST00000370496 DNHD1Q96M86 4753 aa11.75□□□□□ -0.53
COL9A1-204ENST00000370496 AP4M1O00189 453 aa11.74□□□□□ -0.53
COL9A1-204ENST00000370496 GSTZ1O43708 216 aaPredicted RBP11.74□□□□□ -0.53
COL9A1-204ENST00000370496 SLC25A17O43808 307 aa11.74□□□□□ -0.53
COL9A1-204ENST00000370496 FBXO24O75426 580 aa11.74□□□□□ -0.53
COL9A1-204ENST00000370496 HLA-DRB1P01911 266 aa11.74□□□□□ -0.53
COL9A1-204ENST00000370496 S100GP29377 79 aa11.74□□□□□ -0.53
COL9A1-204ENST00000370496 KIR2DS2P43631 304 aa11.74□□□□□ -0.53
COL9A1-204ENST00000370496 KRTAP10-3P60369 221 aa11.74□□□□□ -0.53
COL9A1-204ENST00000370496 RPL30P62888 115 aaKnown RBP11.74□□□□□ -0.53
COL9A1-204ENST00000370496 MEF2DQ14814 521 aa11.74□□□□□ -0.53
COL9A1-204ENST00000370496 PSG5Q15238 335 aa11.74□□□□□ -0.53
COL9A1-204ENST00000370496 TMEM177Q53S58 311 aa11.74□□□□□ -0.53
COL9A1-204ENST00000370496 CENPVQ7Z7K6 275 aaPredicted RBP11.74□□□□□ -0.53
COL9A1-204ENST00000370496 CCDC190Q86UF4 302 aa11.74□□□□□ -0.53
COL9A1-204ENST00000370496 CMTM1Q8IZ96 169 aa11.74□□□□□ -0.53
COL9A1-204ENST00000370496 C11orf44Q8N8P7 122 aa11.74□□□□□ -0.53
COL9A1-204ENST00000370496 OR6Q1Q8NGQ2 317 aa11.74□□□□□ -0.53
COL9A1-204ENST00000370496 SOSTQ9BQB4 213 aa11.74□□□□□ -0.53
COL9A1-204ENST00000370496 WNT10AQ9GZT5 417 aa11.74□□□□□ -0.53
COL9A1-204ENST00000370496 PARP11Q9NR21 331 aa11.74□□□□□ -0.53
COL9A1-204ENST00000370496 PSMB11A5LHX3 300 aa11.73□□□□□ -0.53
COL9A1-204ENST00000370496 CD74P04233 296 aa11.73□□□□□ -0.53
COL9A1-204ENST00000370496 RLN1P04808 185 aa11.73□□□□□ -0.53
COL9A1-204ENST00000370496 AKAIN1P0CW23 69 aa11.73□□□□□ -0.53
COL9A1-204ENST00000370496 PPP5CP53041 499 aa11.73□□□□□ -0.53
COL9A1-204ENST00000370496 EIF4EBP1Q13541 118 aaPredicted RBP11.73□□□□□ -0.53
COL9A1-204ENST00000370496 VMA21Q3ZAQ7 101 aa11.73□□□□□ -0.53
COL9A1-204ENST00000370496 SCGB2B2Q4G0G5 96 aa11.73□□□□□ -0.53
COL9A1-204ENST00000370496 LIN54Q6MZP7 749 aa11.73□□□□□ -0.53
COL9A1-204ENST00000370496 FAAP20Q6NZ36 180 aa11.73□□□□□ -0.53
COL9A1-204ENST00000370496 Q8N402 240 aa11.73□□□□□ -0.53
COL9A1-204ENST00000370496 MFSD4AQ8N468 514 aa11.73□□□□□ -0.53
COL9A1-204ENST00000370496 OR4D10Q8NGI6 311 aa11.73□□□□□ -0.53
COL9A1-204ENST00000370496 OR51H1Q8NH63 302 aa11.73□□□□□ -0.53
COL9A1-204ENST00000370496 OSR1Q8TAX0 266 aaPredicted RBP11.73□□□□□ -0.53
COL9A1-204ENST00000370496 ABHD5Q8WTS1 349 aa11.73□□□□□ -0.53
COL9A1-204ENST00000370496 CHPT1Q8WUD6 406 aa11.73□□□□□ -0.53
COL9A1-204ENST00000370496 NOL4LQ96MY1 436 aaPredicted RBP11.73□□□□□ -0.53
COL9A1-204ENST00000370496 LINC00527Q9UJ94 153 aa11.73□□□□□ -0.53
COL9A1-204ENST00000370496 TET2Q6N021 2002 aaPredicted RBP11.73□□□□□ -0.53
COL9A1-204ENST00000370496 GPR31O00270 319 aa11.72□□□□□ -0.53
COL9A1-204ENST00000370496 PGAM2P15259 253 aa11.72□□□□□ -0.53
COL9A1-204ENST00000370496 PTBP1P26599 531 aaKnown RBP eCLIP11.72□□□□□ -0.53
COL9A1-204ENST00000370496 GNRHRP30968 328 aa11.72□□□□□ -0.53
COL9A1-204ENST00000370496 LGALS7P47929 136 aa11.72□□□□□ -0.53
COL9A1-204ENST00000370496 ZNF79Q15937 498 aa11.72□□□□□ -0.53
COL9A1-204ENST00000370496 PHLDA2Q53GA4 152 aa11.72□□□□□ -0.53
COL9A1-204ENST00000370496 LPCAT3Q6P1A2 487 aa11.72□□□□□ -0.53
COL9A1-204ENST00000370496 SLC38A6Q8IZM9 456 aa11.72□□□□□ -0.53
COL9A1-204ENST00000370496 STPG2Q8N412 459 aa11.72□□□□□ -0.53
COL9A1-204ENST00000370496 POC5Q8NA72 575 aa11.72□□□□□ -0.53
COL9A1-204ENST00000370496 OR4X2Q8NGF9 303 aa11.72□□□□□ -0.53
COL9A1-204ENST00000370496 OR4C16Q8NGL9 310 aa11.72□□□□□ -0.53
COL9A1-204ENST00000370496 CLCC1Q96S66 551 aa11.72□□□□□ -0.53
COL9A1-204ENST00000370496 KRTAP3-3Q9BYR6 98 aa11.72□□□□□ -0.53
COL9A1-204ENST00000370496 KRTAP3-2Q9BYR7 98 aa11.72□□□□□ -0.53
COL9A1-204ENST00000370496 TPSG1Q9NRR2 321 aa11.72□□□□□ -0.53
COL9A1-204ENST00000370496 ANKRD20A5PA0PJZ0 165 aa11.71□□□□□ -0.53
COL9A1-204ENST00000370496 DISC1C4P0D8 188 aa11.71□□□□□ -0.53
COL9A1-204ENST00000370496 CA2P00918 260 aa11.71□□□□□ -0.53
COL9A1-204ENST00000370496 VDAC1P21796 283 aa11.71□□□□□ -0.53
COL9A1-204ENST00000370496 ETV6P41212 452 aa11.71□□□□□ -0.53
COL9A1-204ENST00000370496 SLC35B1P78383 322 aa11.71□□□□□ -0.53
COL9A1-204ENST00000370496 KHDC1LQ5JSQ8 128 aa11.71□□□□□ -0.53
COL9A1-204ENST00000370496 SPAG16Q8N0X2 631 aa11.71□□□□□ -0.53
COL9A1-204ENST00000370496 OR5AU1Q8NGC0 362 aa11.71□□□□□ -0.53
COL9A1-204ENST00000370496 THAP7Q9BT49 309 aaPredicted RBP11.71□□□□□ -0.53
COL9A1-204ENST00000370496 GON7Q9BXV9 100 aa11.71□□□□□ -0.53
COL9A1-204ENST00000370496 OR51J1Q9H342 316 aa11.71□□□□□ -0.53
COL9A1-204ENST00000370496 IGHV7-81A0A0B4J1V7 117 aa11.7□□□□□ -0.54
COL9A1-204ENST00000370496 A6NHS1 94 aa11.7□□□□□ -0.54
COL9A1-204ENST00000370496 LINC01548A6NM66 108 aa11.7□□□□□ -0.54
COL9A1-204ENST00000370496 ATP6V0E1O15342 81 aa11.7□□□□□ -0.54
COL9A1-204ENST00000370496 IGLV2-23P01705 113 aa11.7□□□□□ -0.54
COL9A1-204ENST00000370496 CD28P10747 220 aa11.7□□□□□ -0.54
COL9A1-204ENST00000370496 UCP3P55916 312 aa11.7□□□□□ -0.54
COL9A1-204ENST00000370496 AP3S2P59780 193 aa11.7□□□□□ -0.54
COL9A1-204ENST00000370496 UBE2KP61086 200 aa11.7□□□□□ -0.54
COL9A1-204ENST00000370496 GNB1P62873 340 aa11.7□□□□□ -0.54
COL9A1-204ENST00000370496 ZNF329Q86UD4 541 aa11.7□□□□□ -0.54
COL9A1-204ENST00000370496 PPP1R27Q86WC6 154 aa11.7□□□□□ -0.54
COL9A1-204ENST00000370496 LHFPL1Q86WI0 220 aa11.7□□□□□ -0.54
COL9A1-204ENST00000370496 TRIM63Q969Q1 353 aa11.7□□□□□ -0.54
COL9A1-204ENST00000370496 RSRP1Q9BUV0 290 aa11.7□□□□□ -0.54
COL9A1-204ENST00000370496 MCUBQ9NWR8 336 aa11.7□□□□□ -0.54
COL9A1-204ENST00000370496 M0QZ24 198 aa11.69□□□□□ -0.54
COL9A1-204ENST00000370496 RBFOX2O43251 390 aaKnown RBP eCLIP11.69□□□□□ -0.54
COL9A1-204ENST00000370496 CREBL2O60519 120 aaPredicted RBP11.69□□□□□ -0.54
COL9A1-204ENST00000370496 RAMP3O60896 148 aa11.69□□□□□ -0.54
COL9A1-204ENST00000370496 SAA1P0DJI8 122 aaPredicted RBP11.69□□□□□ -0.54
COL9A1-204ENST00000370496 FAUP35544 74 aaKnown RBP11.69□□□□□ -0.54
COL9A1-204ENST00000370496 INPP1P49441 399 aa11.69□□□□□ -0.54
COL9A1-204ENST00000370496 NDPQ00604 133 aa11.69□□□□□ -0.54
COL9A1-204ENST00000370496 ECSCRQ19T08 205 aa11.69□□□□□ -0.54
COL9A1-204ENST00000370496 C2orf68Q2NKX9 166 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms