RNA–Protein interactions for RNA: ENST00000356316.7

CAPN3-204, Transcript of calpain 3, humanhuman

TSL 5 BASIC

Gene CAPN3, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-204ENST00000356316 BLOC1S6Q9UL45 172 aa8.2□□□□□ -1.1
CAPN3-204ENST00000356316 TRBV6-7A0A0A0MS04 114 aa8.19□□□□□ -1.1
CAPN3-204ENST00000356316 TRAV1-2A0A0B4J238 106 aa8.19□□□□□ -1.1
CAPN3-204ENST00000356316 TRIM64CA6NLI5 447 aa8.19□□□□□ -1.1
CAPN3-204ENST00000356316 H0Y980 276 aa8.19□□□□□ -1.1
CAPN3-204ENST00000356316 LDLRAD4O15165 306 aa8.19□□□□□ -1.1
CAPN3-204ENST00000356316 MPPED1O15442 326 aa8.19□□□□□ -1.1
CAPN3-204ENST00000356316 DIRAS3O95661 229 aa8.19□□□□□ -1.1
CAPN3-204ENST00000356316 FCGR3AP08637 254 aa8.19□□□□□ -1.1
CAPN3-204ENST00000356316 GNB3P16520 340 aa8.19□□□□□ -1.1
CAPN3-204ENST00000356316 MAP2K4P45985 399 aa8.19□□□□□ -1.1
CAPN3-204ENST00000356316 ARL6IP1Q15041 203 aa8.19□□□□□ -1.1
CAPN3-204ENST00000356316 VMA21Q3ZAQ7 101 aa8.19□□□□□ -1.1
CAPN3-204ENST00000356316 MUC7Q8TAX7 377 aa8.19□□□□□ -1.1
CAPN3-204ENST00000356316 NRG4Q8WWG1 115 aa8.19□□□□□ -1.1
CAPN3-204ENST00000356316 USMG5Q96IX5 58 aa8.19□□□□□ -1.1
CAPN3-204ENST00000356316 ADTRPQ96IZ2 230 aa8.19□□□□□ -1.1
CAPN3-204ENST00000356316 DCUN1D5Q9BTE7 237 aa8.19□□□□□ -1.1
CAPN3-204ENST00000356316 PALMDQ9NP74 551 aa8.19□□□□□ -1.1
CAPN3-204ENST00000356316 PEF1Q9UBV8 284 aaKnown RBP8.19□□□□□ -1.1
CAPN3-204ENST00000356316 MSGN1A6NI15 193 aa8.18□□□□□ -1.1
CAPN3-204ENST00000356316 IFITM5A6NNB3 132 aa8.18□□□□□ -1.1
CAPN3-204ENST00000356316 ACTL6BO94805 426 aa8.18□□□□□ -1.1
CAPN3-204ENST00000356316 IGLV1-51P01701 117 aa8.18□□□□□ -1.1
CAPN3-204ENST00000356316 LYL1P12980 280 aa8.18□□□□□ -1.1
CAPN3-204ENST00000356316 RAB3BP20337 219 aa8.18□□□□□ -1.1
CAPN3-204ENST00000356316 RAB6AP20340 208 aa8.18□□□□□ -1.1
CAPN3-204ENST00000356316 HSPA13P48723 471 aa8.18□□□□□ -1.1
CAPN3-204ENST00000356316 PJVKQ0ZLH3 352 aa8.18□□□□□ -1.1
CAPN3-204ENST00000356316 KLF5Q13887 457 aaPredicted RBP8.18□□□□□ -1.1
CAPN3-204ENST00000356316 TMEM177Q53S58 311 aa8.18□□□□□ -1.1
CAPN3-204ENST00000356316 ZNF367Q7RTV3 350 aa8.18□□□□□ -1.1
CAPN3-204ENST00000356316 TEX45Q8NA69 505 aa8.18□□□□□ -1.1
CAPN3-204ENST00000356316 MAFIPQ8WZ33 124 aa8.18□□□□□ -1.1
CAPN3-204ENST00000356316 CNBD2Q96M20 576 aa8.18□□□□□ -1.1
CAPN3-204ENST00000356316 TINAGL1Q9GZM7 467 aaPredicted RBP8.18□□□□□ -1.1
CAPN3-204ENST00000356316 ATG5Q9H1Y0 275 aa8.18□□□□□ -1.1
CAPN3-204ENST00000356316 ZNF230Q9UIE0 474 aaPredicted RBP8.18□□□□□ -1.1
CAPN3-204ENST00000356316 KCNK7Q9Y2U2 307 aa8.18□□□□□ -1.1
CAPN3-204ENST00000356316 A0A0B4J203 849 aa8.17□□□□□ -1.1
CAPN3-204ENST00000356316 CREBL2O60519 120 aaPredicted RBP8.17□□□□□ -1.1
CAPN3-204ENST00000356316 BRI3O95415 125 aa8.17□□□□□ -1.1
CAPN3-204ENST00000356316 CRYZL1O95825 349 aa8.17□□□□□ -1.1
CAPN3-204ENST00000356316 IGLV2-23P01705 113 aa8.17□□□□□ -1.1
CAPN3-204ENST00000356316 CRYGBP07316 175 aa8.17□□□□□ -1.1
CAPN3-204ENST00000356316 APELAP0DMC3 54 aa8.17□□□□□ -1.1
CAPN3-204ENST00000356316 HIST1H1DP16402 221 aaKnown RBP8.17□□□□□ -1.1
CAPN3-204ENST00000356316 LORP23490 312 aaPredicted RBP8.17□□□□□ -1.1
CAPN3-204ENST00000356316 OR10A3P58181 314 aa8.17□□□□□ -1.1
CAPN3-204ENST00000356316 PLA2G7Q13093 441 aa8.17□□□□□ -1.1
CAPN3-204ENST00000356316 TNXAQ16473 311 aa8.17□□□□□ -1.1
CAPN3-204ENST00000356316 RPEL1Q2QD12 228 aa8.17□□□□□ -1.1
CAPN3-204ENST00000356316 GTSCR1Q86UQ5 136 aa8.17□□□□□ -1.1
CAPN3-204ENST00000356316 OR9G4Q8NGQ1 327 aa8.17□□□□□ -1.1
CAPN3-204ENST00000356316 OSR1Q8TAX0 266 aaPredicted RBP8.17□□□□□ -1.1
CAPN3-204ENST00000356316 ACOT12Q8WYK0 555 aa8.17□□□□□ -1.1
CAPN3-204ENST00000356316 SNAPC3Q92966 411 aa8.17□□□□□ -1.1
CAPN3-204ENST00000356316 CABLES2Q9BTV7 478 aa8.17□□□□□ -1.1
CAPN3-204ENST00000356316 ST6GALNAC5Q9BVH7 336 aa8.17□□□□□ -1.1
CAPN3-204ENST00000356316 TUBA4BQ9H853 241 aa8.17□□□□□ -1.1
CAPN3-204ENST00000356316 RYR3Q15413 4870 aa8.17□□□□□ -1.1
CAPN3-204ENST00000356316 TRDV1A0A1B0GX56 115 aa8.16□□□□□ -1.1
CAPN3-204ENST00000356316 J3QRK9 145 aa8.16□□□□□ -1.1
CAPN3-204ENST00000356316 RAB27BO00194 218 aa8.16□□□□□ -1.1
CAPN3-204ENST00000356316 MFNGO00587 321 aa8.16□□□□□ -1.1
CAPN3-204ENST00000356316 CTXN2P0C2S0 81 aa8.16□□□□□ -1.1
CAPN3-204ENST00000356316 OR9G9P0C7N8 305 aa8.16□□□□□ -1.1
CAPN3-204ENST00000356316 IGHV4-30-4P0DP06 118 aa8.16□□□□□ -1.1
CAPN3-204ENST00000356316 GALP22466 123 aa8.16□□□□□ -1.1
CAPN3-204ENST00000356316 SYNJ2BPP57105 145 aa8.16□□□□□ -1.1
CAPN3-204ENST00000356316 UBE2KP61086 200 aa8.16□□□□□ -1.1
CAPN3-204ENST00000356316 TBCEQ15813 527 aaPredicted RBP8.16□□□□□ -1.1
CAPN3-204ENST00000356316 CDNFQ49AH0 187 aa8.16□□□□□ -1.1
CAPN3-204ENST00000356316 CASC10Q5T4H9 136 aa8.16□□□□□ -1.1
CAPN3-204ENST00000356316 ZNF343Q6P1L6 599 aa8.16□□□□□ -1.1
CAPN3-204ENST00000356316 IZUMO2Q6UXV1 221 aa8.16□□□□□ -1.1
CAPN3-204ENST00000356316 HAPLN4Q86UW8 402 aa8.16□□□□□ -1.1
CAPN3-204ENST00000356316 SPIN2AQ99865 258 aa8.16□□□□□ -1.1
CAPN3-204ENST00000356316 SPIN2BQ9BPZ2 258 aa8.16□□□□□ -1.1
CAPN3-204ENST00000356316 NDUFB11Q9NX14 153 aa8.16□□□□□ -1.1
CAPN3-204ENST00000356316 PEMTQ9UBM1 199 aa8.16□□□□□ -1.1
CAPN3-204ENST00000356316 PRELID3BQ9Y3B1 194 aa8.16□□□□□ -1.1
CAPN3-204ENST00000356316 SRRM4A7MD48 611 aaKnown RBP8.15□□□□□ -1.1
CAPN3-204ENST00000356316 TUSC2O75896 110 aa8.15□□□□□ -1.1
CAPN3-204ENST00000356316 SLC22A5O76082 557 aa8.15□□□□□ -1.1
CAPN3-204ENST00000356316 CD36P16671 472 aa8.15□□□□□ -1.1
CAPN3-204ENST00000356316 DTYMKP23919 212 aa8.15□□□□□ -1.1
CAPN3-204ENST00000356316 DUTP33316 252 aaKnown RBP8.15□□□□□ -1.1
CAPN3-204ENST00000356316 SSBP2P81877 361 aaPredicted RBP8.15□□□□□ -1.1
CAPN3-204ENST00000356316 ATP5G2Q06055 141 aa8.15□□□□□ -1.1
CAPN3-204ENST00000356316 SSX1Q16384 188 aa8.15□□□□□ -1.1
CAPN3-204ENST00000356316 PRSS8Q16651 343 aa8.15□□□□□ -1.1
CAPN3-204ENST00000356316 C22orf42Q6IC83 251 aa8.15□□□□□ -1.1
CAPN3-204ENST00000356316 LCN12Q6JVE5 192 aa8.15□□□□□ -1.1
CAPN3-204ENST00000356316 Q6ZS49 121 aa8.15□□□□□ -1.1
CAPN3-204ENST00000356316 MMD2Q8IY49 270 aa8.15□□□□□ -1.1
CAPN3-204ENST00000356316 H1FOOQ8IZA3 346 aaPredicted RBP8.15□□□□□ -1.1
CAPN3-204ENST00000356316 Q8N1Y9 231 aa8.15□□□□□ -1.1
CAPN3-204ENST00000356316 MRPS7Q9Y2R9 242 aaKnown RBP8.15□□□□□ -1.1
CAPN3-204ENST00000356316 DPPA5A6NC42 116 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms