RNA–Protein interactions for RNA: ENST00000354363.10

PRPF40A-201, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 1,622 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-201ENST00000354363 MAP2K4P45985 399 aa11.03□□□□□ -0.64
PRPF40A-201ENST00000354363 PSMD7P51665 324 aa11.03□□□□□ -0.64
PRPF40A-201ENST00000354363 SYNJ2BPP57105 145 aa11.03□□□□□ -0.64
PRPF40A-201ENST00000354363 TAGLNQ01995 201 aaKnown RBP11.03□□□□□ -0.64
PRPF40A-201ENST00000354363 CBX3Q13185 183 aa11.03□□□□□ -0.64
PRPF40A-201ENST00000354363 ZNF343Q6P1L6 599 aa11.03□□□□□ -0.64
PRPF40A-201ENST00000354363 PRSS48Q7RTY5 328 aa11.03□□□□□ -0.64
PRPF40A-201ENST00000354363 OR10R2Q8NGX6 335 aa11.03□□□□□ -0.64
PRPF40A-201ENST00000354363 ACOT13Q9NPJ3 140 aa11.03□□□□□ -0.64
PRPF40A-201ENST00000354363 ADAM30Q9UKF2 790 aa11.03□□□□□ -0.64
PRPF40A-201ENST00000354363 MFNGO00587 321 aa11.02□□□□□ -0.64
PRPF40A-201ENST00000354363 TRBV12-3P01733 135 aa11.02□□□□□ -0.64
PRPF40A-201ENST00000354363 RRASP10301 218 aa11.02□□□□□ -0.64
PRPF40A-201ENST00000354363 GNB3P16520 340 aa11.02□□□□□ -0.64
PRPF40A-201ENST00000354363 AADACP22760 399 aa11.02□□□□□ -0.64
PRPF40A-201ENST00000354363 CRHBPP24387 322 aa11.02□□□□□ -0.64
PRPF40A-201ENST00000354363 DYRK1AQ13627 763 aa11.02□□□□□ -0.64
PRPF40A-201ENST00000354363 RTL8BQ17RB0 113 aa11.02□□□□□ -0.64
PRPF40A-201ENST00000354363 PALMDQ9NP74 551 aa11.02□□□□□ -0.64
PRPF40A-201ENST00000354363 COA4Q9NYJ1 87 aa11.02□□□□□ -0.64
PRPF40A-201ENST00000354363 PEF1Q9UBV8 284 aaKnown RBP11.02□□□□□ -0.64
PRPF40A-201ENST00000354363 ZNF230Q9UIE0 474 aaPredicted RBP11.02□□□□□ -0.64
PRPF40A-201ENST00000354363 A0A075B6Q4 140 aa11.02□□□□□ -0.65
PRPF40A-201ENST00000354363 SHISA3A0PJX4 238 aa11.02□□□□□ -0.65
PRPF40A-201ENST00000354363 H0Y980 276 aa11.02□□□□□ -0.65
PRPF40A-201ENST00000354363 RAB27BO00194 218 aa11.02□□□□□ -0.65
PRPF40A-201ENST00000354363 RBMXL2O75526 392 aaKnown RBP11.02□□□□□ -0.65
PRPF40A-201ENST00000354363 APELAP0DMC3 54 aa11.02□□□□□ -0.65
PRPF40A-201ENST00000354363 GADD45AP24522 165 aa11.02□□□□□ -0.65
PRPF40A-201ENST00000354363 OR10A3P58181 314 aa11.02□□□□□ -0.65
PRPF40A-201ENST00000354363 TEX45Q8NA69 505 aa11.02□□□□□ -0.65
PRPF40A-201ENST00000354363 DDB2Q92466 427 aa11.02□□□□□ -0.65
PRPF40A-201ENST00000354363 USMG5Q96IX5 58 aa11.02□□□□□ -0.65
PRPF40A-201ENST00000354363 PHB2Q99623 299 aa11.02□□□□□ -0.65
PRPF40A-201ENST00000354363 EDA2RQ9HAV5 297 aa11.02□□□□□ -0.65
PRPF40A-201ENST00000354363 GAR1Q9NY12 217 aaKnown RBP11.02□□□□□ -0.65
PRPF40A-201ENST00000354363 RBM7Q9Y580 266 aaKnown RBP11.02□□□□□ -0.65
PRPF40A-201ENST00000354363 TRAV1-2A0A0B4J238 106 aa11.01□□□□□ -0.65
PRPF40A-201ENST00000354363 MSGN1A6NI15 193 aa11.01□□□□□ -0.65
PRPF40A-201ENST00000354363 PDCD5O14737 125 aa11.01□□□□□ -0.65
PRPF40A-201ENST00000354363 CSN3P07498 182 aa11.01□□□□□ -0.65
PRPF40A-201ENST00000354363 HIST1H1DP16402 221 aaKnown RBP11.01□□□□□ -0.65
PRPF40A-201ENST00000354363 DUTP33316 252 aaKnown RBP11.01□□□□□ -0.65
PRPF40A-201ENST00000354363 UBE2KP61086 200 aa11.01□□□□□ -0.65
PRPF40A-201ENST00000354363 SSX1Q16384 188 aa11.01□□□□□ -0.65
PRPF40A-201ENST00000354363 ZFAND6Q6FIF0 208 aa11.01□□□□□ -0.65
PRPF40A-201ENST00000354363 H1FOOQ8IZA3 346 aaPredicted RBP11.01□□□□□ -0.65
PRPF40A-201ENST00000354363 ADAD2Q8NCV1 583 aaKnown RBP11.01□□□□□ -0.65
PRPF40A-201ENST00000354363 ADTRPQ96IZ2 230 aa11.01□□□□□ -0.65
PRPF40A-201ENST00000354363 GINS4Q9BRT9 223 aa11.01□□□□□ -0.65
PRPF40A-201ENST00000354363 THAP7Q9BT49 309 aaPredicted RBP11.01□□□□□ -0.65
PRPF40A-201ENST00000354363 IFITM5A6NNB3 132 aa11□□□□□ -0.65
PRPF40A-201ENST00000354363 LINC00473A8K010 186 aa11□□□□□ -0.65
PRPF40A-201ENST00000354363 CRYZL1O95825 349 aa11□□□□□ -0.65
PRPF40A-201ENST00000354363 OR9G9P0C7N8 305 aa11□□□□□ -0.65
PRPF40A-201ENST00000354363 RAB6AP20340 208 aa11□□□□□ -0.65
PRPF40A-201ENST00000354363 TNXAQ16473 311 aa11□□□□□ -0.65
PRPF40A-201ENST00000354363 PRSS8Q16651 343 aa11□□□□□ -0.65
PRPF40A-201ENST00000354363 RPEL1Q2QD12 228 aa11□□□□□ -0.65
PRPF40A-201ENST00000354363 VMA21Q3ZAQ7 101 aa11□□□□□ -0.65
PRPF40A-201ENST00000354363 SIGLEC8Q9NYZ4 499 aa11□□□□□ -0.65
PRPF40A-201ENST00000354363 IGKV1D-8A0A087WSZ0 117 aa10.99□□□□□ -0.65
PRPF40A-201ENST00000354363 A0A0B4J203 849 aa10.99□□□□□ -0.65
PRPF40A-201ENST00000354363 LCE6AA0A183 80 aa10.99□□□□□ -0.65
PRPF40A-201ENST00000354363 ARFRP1Q13795 201 aa10.99□□□□□ -0.65
PRPF40A-201ENST00000354363 TBCEQ15813 527 aaPredicted RBP10.99□□□□□ -0.65
PRPF40A-201ENST00000354363 HAGHQ16775 308 aa10.99□□□□□ -0.65
PRPF40A-201ENST00000354363 TATDN3Q17R31 274 aa10.99□□□□□ -0.65
PRPF40A-201ENST00000354363 LCN12Q6JVE5 192 aa10.99□□□□□ -0.65
PRPF40A-201ENST00000354363 IDO2Q6ZQW0 420 aa10.99□□□□□ -0.65
PRPF40A-201ENST00000354363 Q6ZS49 121 aa10.99□□□□□ -0.65
PRPF40A-201ENST00000354363 SRSF12Q8WXF0 261 aaKnown RBP10.99□□□□□ -0.65
PRPF40A-201ENST00000354363 ISOC1Q96CN7 298 aa10.99□□□□□ -0.65
PRPF40A-201ENST00000354363 SPATA25Q9BR10 227 aa10.99□□□□□ -0.65
PRPF40A-201ENST00000354363 IZUMO1RA6ND01 250 aa10.98□□□□□ -0.65
PRPF40A-201ENST00000354363 OR2A4O95047 310 aa10.98□□□□□ -0.65
PRPF40A-201ENST00000354363 ZNF367Q7RTV3 350 aa10.98□□□□□ -0.65
PRPF40A-201ENST00000354363 GTSCR1Q86UQ5 136 aa10.98□□□□□ -0.65
PRPF40A-201ENST00000354363 Q8N402 240 aa10.98□□□□□ -0.65
PRPF40A-201ENST00000354363 OSR1Q8TAX0 266 aaPredicted RBP10.98□□□□□ -0.65
PRPF40A-201ENST00000354363 SNAPC3Q92966 411 aa10.98□□□□□ -0.65
PRPF40A-201ENST00000354363 ELF5Q9UKW6 265 aaPredicted RBP10.98□□□□□ -0.65
PRPF40A-201ENST00000354363 METTL21EPA6NDL7 271 aa10.98□□□□□ -0.65
PRPF40A-201ENST00000354363 ERICH4A6NGS2 130 aa10.98□□□□□ -0.65
PRPF40A-201ENST00000354363 PRH1P02810 166 aa10.98□□□□□ -0.65
PRPF40A-201ENST00000354363 RAB3BP20337 219 aa10.98□□□□□ -0.65
PRPF40A-201ENST00000354363 MYL9P24844 172 aa10.98□□□□□ -0.65
PRPF40A-201ENST00000354363 TALDO1P37837 337 aa10.98□□□□□ -0.65
PRPF40A-201ENST00000354363 MECP2P51608 486 aaKnown RBP10.98□□□□□ -0.65
PRPF40A-201ENST00000354363 RHOGP84095 191 aa10.98□□□□□ -0.65
PRPF40A-201ENST00000354363 ZNF45Q02386 682 aa10.98□□□□□ -0.65
PRPF40A-201ENST00000354363 ACOT12Q8WYK0 555 aa10.98□□□□□ -0.65
PRPF40A-201ENST00000354363 CENPOQ9BU64 300 aa10.98□□□□□ -0.65
PRPF40A-201ENST00000354363 ZNF430Q9H8G1 570 aaPredicted RBP10.98□□□□□ -0.65
PRPF40A-201ENST00000354363 AKIP1Q9NQ31 210 aa10.98□□□□□ -0.65
PRPF40A-201ENST00000354363 NDUFB11Q9NX14 153 aa10.98□□□□□ -0.65
PRPF40A-201ENST00000354363 DNAH1Q9P2D7 4330 aa10.98□□□□□ -0.65
PRPF40A-201ENST00000354363 TRBV9A0A0B4J1U6 114 aa10.97□□□□□ -0.65
PRPF40A-201ENST00000354363 TRDV1A0A1B0GX56 115 aa10.97□□□□□ -0.65
PRPF40A-201ENST00000354363 FAM223BA6NKX1 122 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 111.1 ms