RNA–Protein interactions for RNA: ENST00000354325.2

TRERF1-202, Transcript of transcriptional regulating factor 1, humanhuman

TSL 5 BASIC

Gene TRERF1, Length 4,138 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-202ENST00000354325 RTTNQ86VV8 2226 aa10.4□□□□□ -0.74
TRERF1-202ENST00000354325 SHANK1Q9Y566 2161 aa10.4□□□□□ -0.74
TRERF1-202ENST00000354325 TIAF1O95411 115 aa10.4□□□□□ -0.74
TRERF1-202ENST00000354325 IGLC2P0DOY2 106 aa10.4□□□□□ -0.74
TRERF1-202ENST00000354325 IGLC3P0DOY3 106 aa10.4□□□□□ -0.74
TRERF1-202ENST00000354325 ANOS1P23352 680 aa10.4□□□□□ -0.74
TRERF1-202ENST00000354325 EDDM3BP56851 147 aa10.4□□□□□ -0.74
TRERF1-202ENST00000354325 ZNF645Q8N7E2 425 aa10.4□□□□□ -0.74
TRERF1-202ENST00000354325 SMRP1Q8NCR6 262 aa10.4□□□□□ -0.74
TRERF1-202ENST00000354325 RTL8AQ9BWD3 113 aa10.4□□□□□ -0.74
TRERF1-202ENST00000354325 PLEKHA3Q9HB20 300 aa10.4□□□□□ -0.74
TRERF1-202ENST00000354325 WDR83OSQ9Y284 106 aa10.4□□□□□ -0.74
TRERF1-202ENST00000354325 TRAV30A0A087WSZ9 112 aa10.4□□□□□ -0.74
TRERF1-202ENST00000354325 CBY3A6NI87 242 aa10.4□□□□□ -0.74
TRERF1-202ENST00000354325 MRPL33O75394 65 aaKnown RBP10.4□□□□□ -0.74
TRERF1-202ENST00000354325 FBLN7Q53RD9 439 aa10.4□□□□□ -0.74
TRERF1-202ENST00000354325 ETFRF1Q6IPR1 90 aa10.4□□□□□ -0.74
TRERF1-202ENST00000354325 TCF23Q7RTU1 214 aa10.4□□□□□ -0.74
TRERF1-202ENST00000354325 GALMQ96C23 342 aa10.4□□□□□ -0.74
TRERF1-202ENST00000354325 FSCN3Q9NQT6 498 aa10.4□□□□□ -0.74
TRERF1-202ENST00000354325 DLL3Q9NYJ7 618 aa10.4□□□□□ -0.74
TRERF1-202ENST00000354325 RALGAPA1Q6GYQ0 2036 aa10.4□□□□□ -0.75
TRERF1-202ENST00000354325 MLF1P58340 268 aa10.39□□□□□ -0.75
TRERF1-202ENST00000354325 TRIM61Q5EBN2 209 aa10.39□□□□□ -0.75
TRERF1-202ENST00000354325 SYT13Q7L8C5 426 aa10.39□□□□□ -0.75
TRERF1-202ENST00000354325 CLN8Q9UBY8 286 aa10.39□□□□□ -0.75
TRERF1-202ENST00000354325 ARL2-SNX15V9GYD0 113 aa10.39□□□□□ -0.75
TRERF1-202ENST00000354325 IGKV1-6A0A0C4DH72 117 aa10.39□□□□□ -0.75
TRERF1-202ENST00000354325 IGHV1-69-2A0A0G2JMI3 117 aa10.39□□□□□ -0.75
TRERF1-202ENST00000354325 J3QT63 122 aa10.39□□□□□ -0.75
TRERF1-202ENST00000354325 YPEL1O60688 119 aa10.39□□□□□ -0.75
TRERF1-202ENST00000354325 ZNF324O75467 553 aaPredicted RBP10.39□□□□□ -0.75
TRERF1-202ENST00000354325 AMY1AP04745 511 aa10.39□□□□□ -0.75
TRERF1-202ENST00000354325 NTF3P20783 257 aa10.39□□□□□ -0.75
TRERF1-202ENST00000354325 ATP5G3P48201 142 aa10.39□□□□□ -0.75
TRERF1-202ENST00000354325 HLA-BQ31612 363 aa10.39□□□□□ -0.75
TRERF1-202ENST00000354325 KRTAP27-1Q3LI81 207 aa10.39□□□□□ -0.75
TRERF1-202ENST00000354325 GATAD1Q8WUU5 269 aa10.39□□□□□ -0.75
TRERF1-202ENST00000354325 YPEL2Q96QA6 119 aa10.39□□□□□ -0.75
TRERF1-202ENST00000354325 HEYLQ9NQ87 328 aaPredicted RBP10.39□□□□□ -0.75
TRERF1-202ENST00000354325 PHF3Q92576 2039 aaKnown RBP10.39□□□□□ -0.75
TRERF1-202ENST00000354325 TMEM265A0A087WTH1 108 aa10.39□□□□□ -0.75
TRERF1-202ENST00000354325 SRD5A2P31213 254 aa10.39□□□□□ -0.75
TRERF1-202ENST00000354325 LHX2P50458 406 aa10.39□□□□□ -0.75
TRERF1-202ENST00000354325 VWC2Q2TAL6 325 aa10.39□□□□□ -0.75
TRERF1-202ENST00000354325 DRAM1Q8N682 238 aa10.39□□□□□ -0.75
TRERF1-202ENST00000354325 OR4A16Q8NH70 328 aa10.39□□□□□ -0.75
TRERF1-202ENST00000354325 AP1S3Q96PC3 154 aa10.39□□□□□ -0.75
TRERF1-202ENST00000354325 COL5A1P20908 1838 aaPredicted RBP10.39□□□□□ -0.75
TRERF1-202ENST00000354325 LGALS4P56470 323 aa10.39□□□□□ -0.75
TRERF1-202ENST00000354325 A0A0J9YW62 118 aa10.38□□□□□ -0.75
TRERF1-202ENST00000354325 TMEM30CPA0ZSE6 113 aa10.38□□□□□ -0.75
TRERF1-202ENST00000354325 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.38□□□□□ -0.75
TRERF1-202ENST00000354325 TAS2R45P59539 299 aa10.38□□□□□ -0.75
TRERF1-202ENST00000354325 NANOS1Q8WY41 292 aaKnown RBP10.38□□□□□ -0.75
TRERF1-202ENST00000354325 SMIM12Q96EX1 92 aa10.38□□□□□ -0.75
TRERF1-202ENST00000354325 SH2D2AQ9NP31 389 aa10.38□□□□□ -0.75
TRERF1-202ENST00000354325 TOMM40O96008 361 aa10.38□□□□□ -0.75
TRERF1-202ENST00000354325 LINC00869P0C866 280 aa10.38□□□□□ -0.75
TRERF1-202ENST00000354325 HINT1P49773 126 aaPredicted RBP10.38□□□□□ -0.75
TRERF1-202ENST00000354325 TFF3Q07654 80 aa10.38□□□□□ -0.75
TRERF1-202ENST00000354325 MRPL49Q13405 166 aaKnown RBP10.38□□□□□ -0.75
TRERF1-202ENST00000354325 C12orf54Q6X4T0 127 aa10.38□□□□□ -0.75
TRERF1-202ENST00000354325 ZNF295-AS1Q8N0V1 137 aa10.38□□□□□ -0.75
TRERF1-202ENST00000354325 ZIC4Q8N9L1 334 aa10.38□□□□□ -0.75
TRERF1-202ENST00000354325 LRFN3Q9BTN0 628 aa10.38□□□□□ -0.75
TRERF1-202ENST00000354325 DNAJC13O75165 2243 aa10.38□□□□□ -0.75
TRERF1-202ENST00000354325 MED12Q93074 2177 aa10.38□□□□□ -0.75
TRERF1-202ENST00000354325 TRGV10A0A0A0MS01 117 aa10.38□□□□□ -0.75
TRERF1-202ENST00000354325 HYPMO75409 117 aa10.38□□□□□ -0.75
TRERF1-202ENST00000354325 APCSP02743 223 aa10.38□□□□□ -0.75
TRERF1-202ENST00000354325 DUSP3P51452 185 aaPredicted RBP10.38□□□□□ -0.75
TRERF1-202ENST00000354325 PRSS12P56730 875 aa10.38□□□□□ -0.75
TRERF1-202ENST00000354325 HSD17B10Q99714 261 aaKnown RBP10.38□□□□□ -0.75
TRERF1-202ENST00000354325 MTCH1Q9NZJ7 389 aa10.38□□□□□ -0.75
TRERF1-202ENST00000354325 MRPL27Q9P0M9 148 aaKnown RBP10.38□□□□□ -0.75
TRERF1-202ENST00000354325 CHCHD2Q9Y6H1 151 aaPredicted RBP10.38□□□□□ -0.75
TRERF1-202ENST00000354325 TRAV9-2A0A087WT02 112 aa10.37□□□□□ -0.75
TRERF1-202ENST00000354325 TRAV34A0A0B4J273 112 aa10.37□□□□□ -0.75
TRERF1-202ENST00000354325 STAG3L2P0CL84 134 aa10.37□□□□□ -0.75
TRERF1-202ENST00000354325 STAG3L3P0CL85 134 aa10.37□□□□□ -0.75
TRERF1-202ENST00000354325 CDKN1AP38936 164 aa10.37□□□□□ -0.75
TRERF1-202ENST00000354325 ZNF816Q0VGE8 651 aaPredicted RBP10.37□□□□□ -0.75
TRERF1-202ENST00000354325 MORN2Q502X0 79 aa10.37□□□□□ -0.75
TRERF1-202ENST00000354325 OCC1Q8TAD7 63 aa10.37□□□□□ -0.75
TRERF1-202ENST00000354325 OSTCQ9NRP0 149 aa10.37□□□□□ -0.75
TRERF1-202ENST00000354325 SERTAD4Q9NUC0 356 aa10.37□□□□□ -0.75
TRERF1-202ENST00000354325 OR1A1Q9P1Q5 309 aa10.37□□□□□ -0.75
TRERF1-202ENST00000354325 IL19Q9UHD0 177 aa10.37□□□□□ -0.75
TRERF1-202ENST00000354325 PCNX3Q9H6A9 2034 aa10.37□□□□□ -0.75
TRERF1-202ENST00000354325 C5orf49A4QMS7 147 aa10.37□□□□□ -0.75
TRERF1-202ENST00000354325 IGKV1-39P01597 117 aa10.37□□□□□ -0.75
TRERF1-202ENST00000354325 IGKV1D-39P04432 117 aa10.37□□□□□ -0.75
TRERF1-202ENST00000354325 ARL14EPLP0DKL9 152 aa10.37□□□□□ -0.75
TRERF1-202ENST00000354325 TRA2AQ13595 282 aaKnown RBP eCLIP10.37□□□□□ -0.75
TRERF1-202ENST00000354325 RASL11AQ6T310 242 aa10.37□□□□□ -0.75
TRERF1-202ENST00000354325 OR8I2Q8N0Y5 310 aa10.37□□□□□ -0.75
TRERF1-202ENST00000354325 OCIAD1Q9NX40 245 aa10.37□□□□□ -0.75
TRERF1-202ENST00000354325 WDR87Q6ZQQ6 2873 aa10.37□□□□□ -0.75
TRERF1-202ENST00000354325 IGHV1OR15-9A0A0B4J2B8 117 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms