RNA–Protein interactions for RNA: ENST00000338850.5

RTN3-201, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-201ENST00000338850 LILRB2Q8N423 598 aa9.01□□□□□ -0.97
RTN3-201ENST00000338850 Q8WTZ3 238 aa9.01□□□□□ -0.97
RTN3-201ENST00000338850 RAB1CQ92928 201 aa9.01□□□□□ -0.97
RTN3-201ENST00000338850 GALMQ96C23 342 aa9.01□□□□□ -0.97
RTN3-201ENST00000338850 BTF3L4Q96K17 158 aa9.01□□□□□ -0.97
RTN3-201ENST00000338850 ZNF488Q96MN9 340 aa9.01□□□□□ -0.97
RTN3-201ENST00000338850 HSD17B10Q99714 261 aaKnown RBP9.01□□□□□ -0.97
RTN3-201ENST00000338850 TXNDC17Q9BRA2 123 aa9.01□□□□□ -0.97
RTN3-201ENST00000338850 PYGO2Q9BRQ0 406 aa9.01□□□□□ -0.97
RTN3-201ENST00000338850 C20orf24Q9BUV8 137 aa9.01□□□□□ -0.97
RTN3-201ENST00000338850 CXXC4Q9H2H0 198 aa9.01□□□□□ -0.97
RTN3-201ENST00000338850 CHODLQ9H9P2 273 aa9.01□□□□□ -0.97
RTN3-201ENST00000338850 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.01□□□□□ -0.97
RTN3-201ENST00000338850 Q9UFV3 132 aa9.01□□□□□ -0.97
RTN3-201ENST00000338850 C2CD3Q4AC94 2353 aa9.01□□□□□ -0.97
RTN3-201ENST00000338850 AKAP9Q99996 3911 aa9□□□□□ -0.97
RTN3-201ENST00000338850 MAP1LC3B2A6NCE7 125 aa9□□□□□ -0.97
RTN3-201ENST00000338850 PMS2P5A8MQ11 134 aa9□□□□□ -0.97
RTN3-201ENST00000338850 HSPB6O14558 160 aa9□□□□□ -0.97
RTN3-201ENST00000338850 RBFOX2O43251 390 aaKnown RBP eCLIP9□□□□□ -0.97
RTN3-201ENST00000338850 TNFSF12O43508 249 aa9□□□□□ -0.97
RTN3-201ENST00000338850 CLN5O75503 358 aa9□□□□□ -0.97
RTN3-201ENST00000338850 FABP1P07148 127 aa9□□□□□ -0.97
RTN3-201ENST00000338850 ADH4P08319 380 aa9□□□□□ -0.97
RTN3-201ENST00000338850 DAOP14920 347 aa9□□□□□ -0.97
RTN3-201ENST00000338850 TMEM267Q0VDI3 215 aaPredicted RBP9□□□□□ -0.97
RTN3-201ENST00000338850 ZNF726P1Q15940 193 aa9□□□□□ -0.97
RTN3-201ENST00000338850 CR1LQ2VPA4 569 aa9□□□□□ -0.97
RTN3-201ENST00000338850 AKIRIN2Q53H80 203 aa9□□□□□ -0.97
RTN3-201ENST00000338850 BCL2L14Q9BZR8 327 aa9□□□□□ -0.97
RTN3-201ENST00000338850 MAP1LC3BQ9GZQ8 125 aa9□□□□□ -0.97
RTN3-201ENST00000338850 NAT8Q9UHE5 227 aa9□□□□□ -0.97
RTN3-201ENST00000338850 GAB2Q9UQC2 676 aa9□□□□□ -0.97
RTN3-201ENST00000338850 DMRT1Q9Y5R6 373 aa9□□□□□ -0.97
RTN3-201ENST00000338850 ANKHD1Q8IWZ3 2542 aaKnown RBP9□□□□□ -0.97
RTN3-201ENST00000338850 HCFC1P51610 2035 aa9□□□□□ -0.97
RTN3-201ENST00000338850 SETD2Q9BYW2 2564 aaPredicted RBP9□□□□□ -0.97
RTN3-201ENST00000338850 SMCO3A2RU48 225 aa8.99□□□□□ -0.97
RTN3-201ENST00000338850 PCP4L1A6NKN8 68 aa8.99□□□□□ -0.97
RTN3-201ENST00000338850 LRRC30A6NM36 301 aa8.99□□□□□ -0.97
RTN3-201ENST00000338850 SIRPB1O00241 398 aa8.99□□□□□ -0.97
RTN3-201ENST00000338850 MPDU1O75352 247 aa8.99□□□□□ -0.97
RTN3-201ENST00000338850 KBTBD11O94819 623 aa8.99□□□□□ -0.97
RTN3-201ENST00000338850 VENTXO95231 258 aa8.99□□□□□ -0.97
RTN3-201ENST00000338850 IGLV1-44P01699 117 aa8.99□□□□□ -0.97
RTN3-201ENST00000338850 FBP1P09467 338 aa8.99□□□□□ -0.97
RTN3-201ENST00000338850 IGHV1-2P23083 117 aa8.99□□□□□ -0.97
RTN3-201ENST00000338850 CFHR2P36980 270 aa8.99□□□□□ -0.97
RTN3-201ENST00000338850 RPS10P46783 165 aaKnown RBP8.99□□□□□ -0.97
RTN3-201ENST00000338850 GNB2P62879 340 aa8.99□□□□□ -0.97
RTN3-201ENST00000338850 ARL16Q0P5N6 197 aa8.99□□□□□ -0.97
RTN3-201ENST00000338850 SSX2Q16385 188 aa8.99□□□□□ -0.97
RTN3-201ENST00000338850 SMIM21Q3B7S5 101 aa8.99□□□□□ -0.97
RTN3-201ENST00000338850 C3orf36Q3SXR2 165 aa8.99□□□□□ -0.97
RTN3-201ENST00000338850 MBNL2Q5VZF2 373 aaKnown RBP8.99□□□□□ -0.97
RTN3-201ENST00000338850 WDR25Q64LD2 544 aaPredicted RBP8.99□□□□□ -0.97
RTN3-201ENST00000338850 SPNS3Q6ZMD2 512 aa8.99□□□□□ -0.97
RTN3-201ENST00000338850 SEM1Q6ZVN7 128 aa8.99□□□□□ -0.97
RTN3-201ENST00000338850 FGFRL1Q8N441 504 aa8.99□□□□□ -0.97
RTN3-201ENST00000338850 OR52E5Q8NH55 327 aa8.99□□□□□ -0.97
RTN3-201ENST00000338850 SLC25A40Q8TBP6 338 aa8.99□□□□□ -0.97
RTN3-201ENST00000338850 IL1F10Q8WWZ1 152 aa8.99□□□□□ -0.97
RTN3-201ENST00000338850 EDARADDQ8WWZ3 215 aa8.99□□□□□ -0.97
RTN3-201ENST00000338850 OR4C12Q96R67 309 aa8.99□□□□□ -0.97
RTN3-201ENST00000338850 RSG1Q9BU20 258 aa8.99□□□□□ -0.97
RTN3-201ENST00000338850 GGACTQ9BVM4 153 aa8.99□□□□□ -0.97
RTN3-201ENST00000338850 OR2J1Q9GZK6 312 aa8.99□□□□□ -0.97
RTN3-201ENST00000338850 ZNF665Q9H7R5 613 aa8.99□□□□□ -0.97
RTN3-201ENST00000338850 GSN-AS1Q9NRJ2 163 aa8.99□□□□□ -0.97
RTN3-201ENST00000338850 KCNS2Q9ULS6 477 aa8.99□□□□□ -0.97
RTN3-201ENST00000338850 C12orf77C9JDV5 145 aa8.98□□□□□ -0.97
RTN3-201ENST00000338850 C17orf112F2Z3M2 114 aa8.98□□□□□ -0.97
RTN3-201ENST00000338850 PHOX2AO14813 284 aa8.98□□□□□ -0.97
RTN3-201ENST00000338850 IGHV2-70P01814 119 aa8.98□□□□□ -0.97
RTN3-201ENST00000338850 METTL15P1P0C7V9 234 aa8.98□□□□□ -0.97
RTN3-201ENST00000338850 NQO2P16083 231 aa8.98□□□□□ -0.97
RTN3-201ENST00000338850 CEACAM6P40199 344 aa8.98□□□□□ -0.97
RTN3-201ENST00000338850 RIPPLY3P57055 190 aa8.98□□□□□ -0.97
RTN3-201ENST00000338850 ERVFRD-1P60508 538 aa8.98□□□□□ -0.97
RTN3-201ENST00000338850 MEF2BQ02080 365 aaPredicted RBP8.98□□□□□ -0.97
RTN3-201ENST00000338850 PSG7Q13046 419 aa8.98□□□□□ -0.97
RTN3-201ENST00000338850 TMEM30BQ3MIR4 351 aa8.98□□□□□ -0.97
RTN3-201ENST00000338850 COA6Q5JTJ3 125 aaKnown RBP8.98□□□□□ -0.97
RTN3-201ENST00000338850 ACP7Q6ZNF0 438 aa8.98□□□□□ -0.97
RTN3-201ENST00000338850 FAM214BQ7L5A3 538 aa8.98□□□□□ -0.97
RTN3-201ENST00000338850 BATF2Q8N1L9 274 aa8.98□□□□□ -0.97
RTN3-201ENST00000338850 NANPQ8TBE9 248 aa8.98□□□□□ -0.97
RTN3-201ENST00000338850 NINJ1Q92982 152 aa8.98□□□□□ -0.97
RTN3-201ENST00000338850 ANAPC16Q96DE5 110 aa8.98□□□□□ -0.97
RTN3-201ENST00000338850 RBKSQ9H477 322 aa8.98□□□□□ -0.97
RTN3-201ENST00000338850 RAB9BQ9NP90 201 aa8.98□□□□□ -0.97
RTN3-201ENST00000338850 GAR1Q9NY12 217 aaKnown RBP8.98□□□□□ -0.97
RTN3-201ENST00000338850 DOK5Q9P104 306 aa8.98□□□□□ -0.97
RTN3-201ENST00000338850 GNG13Q9P2W3 67 aa8.98□□□□□ -0.97
RTN3-201ENST00000338850 RBM7Q9Y580 266 aaKnown RBP8.98□□□□□ -0.97
RTN3-201ENST00000338850 ODAMA1E959 279 aa8.97□□□□□ -0.97
RTN3-201ENST00000338850 H3BP45 60 aa8.97□□□□□ -0.97
RTN3-201ENST00000338850 HIST1H2BKO60814 126 aa8.97□□□□□ -0.97
RTN3-201ENST00000338850 HIST1H2BJP06899 126 aa8.97□□□□□ -0.97
RTN3-201ENST00000338850 CXCL1P09341 107 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms