RNA–Protein interactions for RNA: ENST00000315544.6

CNOT4-201, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 3,783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-201ENST00000315544 HIST2H2ABQ8IUE6 130 aaPredicted RBP6.37□□□□□ -1.39
CNOT4-201ENST00000315544 ZBTB34Q8NCN2 500 aa6.37□□□□□ -1.39
CNOT4-201ENST00000315544 MBD3L2Q8NHZ7 208 aaPredicted RBP6.37□□□□□ -1.39
CNOT4-201ENST00000315544 SPOCK3Q9BQ16 436 aa6.37□□□□□ -1.39
CNOT4-201ENST00000315544 DEFB126Q9BYW3 111 aa6.37□□□□□ -1.39
CNOT4-201ENST00000315544 IGHV1-18A0A0C4DH31 117 aa6.37□□□□□ -1.39
CNOT4-201ENST00000315544 TRGC2P03986 189 aa6.37□□□□□ -1.39
CNOT4-201ENST00000315544 CTXN2P0C2S0 81 aa6.37□□□□□ -1.39
CNOT4-201ENST00000315544 ADORA2A-AS1P86434 159 aa6.37□□□□□ -1.39
CNOT4-201ENST00000315544 PNRC1Q12796 327 aaPredicted RBP6.37□□□□□ -1.39
CNOT4-201ENST00000315544 IL22RA1Q8N6P7 574 aa6.37□□□□□ -1.39
CNOT4-201ENST00000315544 OR10V1Q8NGI7 309 aa6.37□□□□□ -1.39
CNOT4-201ENST00000315544 GMPPAQ96IJ6 420 aaPredicted RBP6.37□□□□□ -1.39
CNOT4-201ENST00000315544 ELOVL5Q9NYP7 299 aa6.37□□□□□ -1.39
CNOT4-201ENST00000315544 FOXA2Q9Y261 457 aaPredicted RBP6.37□□□□□ -1.39
CNOT4-201ENST00000315544 SPTBN4Q9H254 2564 aa6.37□□□□□ -1.39
CNOT4-201ENST00000315544 A0A1B0GXF2 115 aa6.37□□□□□ -1.39
CNOT4-201ENST00000315544 NPIPB6E9PJ23 425 aa6.37□□□□□ -1.39
CNOT4-201ENST00000315544 RAB29O14966 203 aa6.37□□□□□ -1.39
CNOT4-201ENST00000315544 PHF1O43189 567 aaPredicted RBP6.37□□□□□ -1.39
CNOT4-201ENST00000315544 CLDN14O95500 239 aa6.37□□□□□ -1.39
CNOT4-201ENST00000315544 IFNA6P05013 189 aa6.37□□□□□ -1.39
CNOT4-201ENST00000315544 RAC2P15153 192 aa6.37□□□□□ -1.39
CNOT4-201ENST00000315544 PCBD1P61457 104 aa6.37□□□□□ -1.39
CNOT4-201ENST00000315544 COL10A1Q03692 680 aa6.37□□□□□ -1.39
CNOT4-201ENST00000315544 P2RY6Q15077 328 aa6.37□□□□□ -1.39
CNOT4-201ENST00000315544 C4orf17Q53FE4 359 aa6.37□□□□□ -1.39
CNOT4-201ENST00000315544 FBXW9Q5XUX1 488 aa6.37□□□□□ -1.39
CNOT4-201ENST00000315544 MOB1BQ7L9L4 216 aa6.37□□□□□ -1.39
CNOT4-201ENST00000315544 GBGT1Q8N5D6 347 aa6.37□□□□□ -1.39
CNOT4-201ENST00000315544 YTHDF2Q9Y5A9 579 aaKnown RBP6.37□□□□□ -1.39
CNOT4-201ENST00000315544 CHD6Q8TD26 2715 aa6.37□□□□□ -1.39
CNOT4-201ENST00000315544 DVL1O14640 695 aa6.36□□□□□ -1.39
CNOT4-201ENST00000315544 CRXO43186 299 aaPredicted RBP6.36□□□□□ -1.39
CNOT4-201ENST00000315544 CA7P43166 264 aa6.36□□□□□ -1.39
CNOT4-201ENST00000315544 HAAOP46952 286 aa6.36□□□□□ -1.39
CNOT4-201ENST00000315544 RSU1Q15404 277 aa6.36□□□□□ -1.39
CNOT4-201ENST00000315544 ZNF600Q6ZNG1 722 aa6.36□□□□□ -1.39
CNOT4-201ENST00000315544 Q6ZT83 130 aa6.36□□□□□ -1.39
CNOT4-201ENST00000315544 KRTAP1-3Q8IUG1 177 aa6.36□□□□□ -1.39
CNOT4-201ENST00000315544 GNPNAT1Q96EK6 184 aaPredicted RBP6.36□□□□□ -1.39
CNOT4-201ENST00000315544 SFXN3Q9BWM7 321 aa6.36□□□□□ -1.39
CNOT4-201ENST00000315544 ELOA3CA0A087WX78 387 aaPredicted RBP6.36□□□□□ -1.39
CNOT4-201ENST00000315544 SYNGR2O43760 224 aa6.36□□□□□ -1.39
CNOT4-201ENST00000315544 OR2C1O95371 312 aa6.36□□□□□ -1.39
CNOT4-201ENST00000315544 IGLV2-11P01706 119 aa6.36□□□□□ -1.39
CNOT4-201ENST00000315544 NKX2-1P43699 371 aaPredicted RBP6.36□□□□□ -1.39
CNOT4-201ENST00000315544 RAB2AP61019 212 aa6.36□□□□□ -1.39
CNOT4-201ENST00000315544 UBE2KP61086 200 aa6.36□□□□□ -1.39
CNOT4-201ENST00000315544 MORN2Q502X0 79 aa6.36□□□□□ -1.39
CNOT4-201ENST00000315544 ZNF833PQ6ZTB9 187 aa6.36□□□□□ -1.39
CNOT4-201ENST00000315544 BEND4Q6ZU67 534 aa6.36□□□□□ -1.39
CNOT4-201ENST00000315544 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.36□□□□□ -1.39
CNOT4-201ENST00000315544 GCSAMQ8N6F7 178 aa6.36□□□□□ -1.39
CNOT4-201ENST00000315544 NANPQ8TBE9 248 aa6.36□□□□□ -1.39
CNOT4-201ENST00000315544 WIPF2Q8TF74 440 aaPredicted RBP6.36□□□□□ -1.39
CNOT4-201ENST00000315544 STARD4Q96DR4 205 aa6.36□□□□□ -1.39
CNOT4-201ENST00000315544 CTDSP1Q9GZU7 261 aa6.36□□□□□ -1.39
CNOT4-201ENST00000315544 COL12A1Q99715 3063 aa6.36□□□□□ -1.39
CNOT4-201ENST00000315544 H7C2Y5 167 aa6.36□□□□□ -1.39
CNOT4-201ENST00000315544 SSSCA1O60232 199 aa6.36□□□□□ -1.39
CNOT4-201ENST00000315544 ZG16O60844 167 aa6.36□□□□□ -1.39
CNOT4-201ENST00000315544 TFF1P04155 84 aa6.36□□□□□ -1.39
CNOT4-201ENST00000315544 TUBG1P23258 451 aa6.36□□□□□ -1.39
CNOT4-201ENST00000315544 ZNF266Q14584 549 aa6.36□□□□□ -1.39
CNOT4-201ENST00000315544 Q71RC1 249 aaPredicted RBP6.36□□□□□ -1.39
CNOT4-201ENST00000315544 AAED1Q7RTV5 226 aa6.36□□□□□ -1.39
CNOT4-201ENST00000315544 MRGPRGQ86SM5 289 aa6.36□□□□□ -1.39
CNOT4-201ENST00000315544 FAM58AQ8N1B3 248 aa6.36□□□□□ -1.39
CNOT4-201ENST00000315544 ZNF565Q8N9K5 539 aa6.36□□□□□ -1.39
CNOT4-201ENST00000315544 ZDHHC16Q969W1 377 aa6.36□□□□□ -1.39
CNOT4-201ENST00000315544 RBM24Q9BX46 236 aaKnown RBP6.36□□□□□ -1.39
CNOT4-201ENST00000315544 GGTLC1Q9BX51 225 aa6.36□□□□□ -1.39
CNOT4-201ENST00000315544 TUBG2Q9NRH3 451 aa6.36□□□□□ -1.39
CNOT4-201ENST00000315544 COMMD9Q9P000 198 aa6.36□□□□□ -1.39
CNOT4-201ENST00000315544 TRBV23-1A0A0A0MS06 115 aa6.35□□□□□ -1.39
CNOT4-201ENST00000315544 FAM230AA0A1W2PPH8 454 aa6.35□□□□□ -1.39
CNOT4-201ENST00000315544 ABHD17BQ5VST6 288 aa6.35□□□□□ -1.39
CNOT4-201ENST00000315544 OR13A1Q8NGR1 328 aa6.35□□□□□ -1.39
CNOT4-201ENST00000315544 SDSLQ96GA7 329 aa6.35□□□□□ -1.39
CNOT4-201ENST00000315544 DERL1Q9BUN8 251 aa6.35□□□□□ -1.39
CNOT4-201ENST00000315544 PRSS22Q9GZN4 317 aa6.35□□□□□ -1.39
CNOT4-201ENST00000315544 OR6C3Q9NZP0 311 aa6.35□□□□□ -1.39
CNOT4-201ENST00000315544 C14orf166Q9Y224 244 aaKnown RBP6.35□□□□□ -1.39
CNOT4-201ENST00000315544 TRAV3A0A0B4J244 114 aa6.35□□□□□ -1.39
CNOT4-201ENST00000315544 LY6LH3BQJ8 138 aa6.35□□□□□ -1.39
CNOT4-201ENST00000315544 SLC31A2O15432 143 aa6.35□□□□□ -1.39
CNOT4-201ENST00000315544 VAX2Q9UIW0 290 aa6.35□□□□□ -1.39
CNOT4-201ENST00000315544 KLF12Q9Y4X4 402 aa6.35□□□□□ -1.39
CNOT4-201ENST00000315544 C9JCJ5 164 aa6.35□□□□□ -1.39
CNOT4-201ENST00000315544 S1PR2O95136 353 aa6.35□□□□□ -1.39
CNOT4-201ENST00000315544 DEFA4P12838 97 aa6.35□□□□□ -1.39
CNOT4-201ENST00000315544 ARR3P36575 388 aa6.35□□□□□ -1.39
CNOT4-201ENST00000315544 NCMAPQ5T1S8 102 aa6.35□□□□□ -1.39
CNOT4-201ENST00000315544 OR14L1PQ8NHC6 308 aa6.35□□□□□ -1.39
CNOT4-201ENST00000315544 ITLN2Q8WWU7 325 aaPredicted RBP6.35□□□□□ -1.39
CNOT4-201ENST00000315544 TMEM204Q9BSN7 226 aa6.35□□□□□ -1.39
CNOT4-201ENST00000315544 PDCD10Q9BUL8 212 aa6.35□□□□□ -1.39
CNOT4-201ENST00000315544 KCNIP1Q9NZI2 227 aa6.35□□□□□ -1.39
CNOT4-201ENST00000315544 A0A1B0GW55 424 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms