RNA–Protein interactions for RNA: ENST00000306641.1

CSPG4P1Y-201, Transcript of CSPG4 pseudogene 1 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P1Y, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P1Y-201ENST00000306641 IGLV2-14P01704 120 aa8.71□□□□□ -1.02
CSPG4P1Y-201ENST00000306641 HLA-DRB1P01911 266 aa8.71□□□□□ -1.02
CSPG4P1Y-201ENST00000306641 AKAIN1P0CW23 69 aa8.71□□□□□ -1.02
CSPG4P1Y-201ENST00000306641 VDAC1P21796 283 aa8.71□□□□□ -1.02
CSPG4P1Y-201ENST00000306641 LGALS7P47929 136 aa8.71□□□□□ -1.02
CSPG4P1Y-201ENST00000306641 MEF2DQ14814 521 aa8.71□□□□□ -1.02
CSPG4P1Y-201ENST00000306641 AADACL3Q5VUY0 350 aa8.71□□□□□ -1.02
CSPG4P1Y-201ENST00000306641 LIN54Q6MZP7 749 aa8.71□□□□□ -1.02
CSPG4P1Y-201ENST00000306641 STEAP1BQ6NZ63 245 aa8.71□□□□□ -1.02
CSPG4P1Y-201ENST00000306641 ZNF818PQ6ZRF7 136 aa8.71□□□□□ -1.02
CSPG4P1Y-201ENST00000306641 CMTM1Q8IZ96 169 aa8.71□□□□□ -1.02
CSPG4P1Y-201ENST00000306641 MFSD4AQ8N468 514 aa8.71□□□□□ -1.02
CSPG4P1Y-201ENST00000306641 ARRDC1Q8N5I2 433 aa8.71□□□□□ -1.02
CSPG4P1Y-201ENST00000306641 POC5Q8NA72 575 aa8.71□□□□□ -1.02
CSPG4P1Y-201ENST00000306641 OSR1Q8TAX0 266 aaPredicted RBP8.71□□□□□ -1.02
CSPG4P1Y-201ENST00000306641 ABHD5Q8WTS1 349 aa8.71□□□□□ -1.02
CSPG4P1Y-201ENST00000306641 DDB2Q92466 427 aa8.71□□□□□ -1.02
CSPG4P1Y-201ENST00000306641 RITA1Q96K30 269 aa8.71□□□□□ -1.02
CSPG4P1Y-201ENST00000306641 HSPB9Q9BQS6 159 aa8.71□□□□□ -1.02
CSPG4P1Y-201ENST00000306641 WNT10AQ9GZT5 417 aa8.71□□□□□ -1.02
CSPG4P1Y-201ENST00000306641 FBXL15Q9H469 300 aa8.71□□□□□ -1.02
CSPG4P1Y-201ENST00000306641 DISC1C4P0D8 188 aa8.7□□□□□ -1.02
CSPG4P1Y-201ENST00000306641 M0QZ24 198 aa8.7□□□□□ -1.02
CSPG4P1Y-201ENST00000306641 GPR31O00270 319 aa8.7□□□□□ -1.02
CSPG4P1Y-201ENST00000306641 CREBL2O60519 120 aaPredicted RBP8.7□□□□□ -1.02
CSPG4P1Y-201ENST00000306641 PGAM2P15259 253 aa8.7□□□□□ -1.02
CSPG4P1Y-201ENST00000306641 PTBP1P26599 531 aaKnown RBP eCLIP8.7□□□□□ -1.02
CSPG4P1Y-201ENST00000306641 AP3S2P59780 193 aa8.7□□□□□ -1.02
CSPG4P1Y-201ENST00000306641 KRTAP10-3P60369 221 aa8.7□□□□□ -1.02
CSPG4P1Y-201ENST00000306641 SRSF4Q08170 494 aaKnown RBP8.7□□□□□ -1.02
CSPG4P1Y-201ENST00000306641 PSG5Q15238 335 aa8.7□□□□□ -1.02
CSPG4P1Y-201ENST00000306641 SCGB2B2Q4G0G5 96 aa8.7□□□□□ -1.02
CSPG4P1Y-201ENST00000306641 TMEM177Q53S58 311 aa8.7□□□□□ -1.02
CSPG4P1Y-201ENST00000306641 KHDC1LQ5JSQ8 128 aa8.7□□□□□ -1.02
CSPG4P1Y-201ENST00000306641 FOXB2Q5VYV0 432 aa8.7□□□□□ -1.02
CSPG4P1Y-201ENST00000306641 ZNF660Q6AZW8 331 aaPredicted RBP8.7□□□□□ -1.02
CSPG4P1Y-201ENST00000306641 SLC38A6Q8IZM9 456 aa8.7□□□□□ -1.02
CSPG4P1Y-201ENST00000306641 STPG2Q8N412 459 aa8.7□□□□□ -1.02
CSPG4P1Y-201ENST00000306641 C11orf44Q8N8P7 122 aa8.7□□□□□ -1.02
CSPG4P1Y-201ENST00000306641 OR5AU1Q8NGC0 362 aa8.7□□□□□ -1.02
CSPG4P1Y-201ENST00000306641 OR51H1Q8NH63 302 aa8.7□□□□□ -1.02
CSPG4P1Y-201ENST00000306641 SGMS2Q8NHU3 365 aa8.7□□□□□ -1.02
CSPG4P1Y-201ENST00000306641 NOL4LQ96MY1 436 aaPredicted RBP8.7□□□□□ -1.02
CSPG4P1Y-201ENST00000306641 CLCC1Q96S66 551 aa8.7□□□□□ -1.02
CSPG4P1Y-201ENST00000306641 TINAGL1Q9GZM7 467 aaPredicted RBP8.7□□□□□ -1.02
CSPG4P1Y-201ENST00000306641 PARP11Q9NR21 331 aa8.7□□□□□ -1.02
CSPG4P1Y-201ENST00000306641 PLXNB1O43157 2135 aa8.69□□□□□ -1.02
CSPG4P1Y-201ENST00000306641 CA2P00918 260 aa8.69□□□□□ -1.02
CSPG4P1Y-201ENST00000306641 OPN1MWP04001 364 aa8.69□□□□□ -1.02
CSPG4P1Y-201ENST00000306641 CD74P04233 296 aa8.69□□□□□ -1.02
CSPG4P1Y-201ENST00000306641 RLN1P04808 185 aa8.69□□□□□ -1.02
CSPG4P1Y-201ENST00000306641 OPN1MW2P0DN77 364 aa8.69□□□□□ -1.02
CSPG4P1Y-201ENST00000306641 OPN1MW3P0DN78 364 aa8.69□□□□□ -1.02
CSPG4P1Y-201ENST00000306641 GNRHRP30968 328 aa8.69□□□□□ -1.02
CSPG4P1Y-201ENST00000306641 FAUP35544 74 aaKnown RBP8.69□□□□□ -1.02
CSPG4P1Y-201ENST00000306641 ECI1P42126 302 aa8.69□□□□□ -1.02
CSPG4P1Y-201ENST00000306641 INPP1P49441 399 aa8.69□□□□□ -1.02
CSPG4P1Y-201ENST00000306641 PPP5CP53041 499 aa8.69□□□□□ -1.02
CSPG4P1Y-201ENST00000306641 RPL30P62888 115 aaKnown RBP8.69□□□□□ -1.02
CSPG4P1Y-201ENST00000306641 EIF4EBP1Q13541 118 aaPredicted RBP8.69□□□□□ -1.02
CSPG4P1Y-201ENST00000306641 C2orf68Q2NKX9 166 aa8.69□□□□□ -1.02
CSPG4P1Y-201ENST00000306641 PHLDA2Q53GA4 152 aa8.69□□□□□ -1.02
CSPG4P1Y-201ENST00000306641 CCDC190Q86UF4 302 aa8.69□□□□□ -1.02
CSPG4P1Y-201ENST00000306641 SPAG16Q8N0X2 631 aa8.69□□□□□ -1.02
CSPG4P1Y-201ENST00000306641 Q8N402 240 aa8.69□□□□□ -1.02
CSPG4P1Y-201ENST00000306641 OR6Q1Q8NGQ2 317 aa8.69□□□□□ -1.02
CSPG4P1Y-201ENST00000306641 VSTM2AQ8TAG5 236 aa8.69□□□□□ -1.02
CSPG4P1Y-201ENST00000306641 CD300LFQ8TDQ1 290 aa8.69□□□□□ -1.02
CSPG4P1Y-201ENST00000306641 AIFM2Q9BRQ8 373 aa8.69□□□□□ -1.02
CSPG4P1Y-201ENST00000306641 OR51J1Q9H342 316 aa8.69□□□□□ -1.02
CSPG4P1Y-201ENST00000306641 LINC00527Q9UJ94 153 aa8.69□□□□□ -1.02
CSPG4P1Y-201ENST00000306641 V9GYH0 126 aa8.69□□□□□ -1.02
CSPG4P1Y-201ENST00000306641 IGHV7-81A0A0B4J1V7 117 aa8.68□□□□□ -1.02
CSPG4P1Y-201ENST00000306641 ATP6V0E1O15342 81 aa8.68□□□□□ -1.02
CSPG4P1Y-201ENST00000306641 ACTL6BO94805 426 aa8.68□□□□□ -1.02
CSPG4P1Y-201ENST00000306641 CNIH1O95406 144 aa8.68□□□□□ -1.02
CSPG4P1Y-201ENST00000306641 HRASP01112 189 aa8.68□□□□□ -1.02
CSPG4P1Y-201ENST00000306641 CD28P10747 220 aa8.68□□□□□ -1.02
CSPG4P1Y-201ENST00000306641 UCP3P55916 312 aa8.68□□□□□ -1.02
CSPG4P1Y-201ENST00000306641 UBE2KP61086 200 aa8.68□□□□□ -1.02
CSPG4P1Y-201ENST00000306641 GNB1P62873 340 aa8.68□□□□□ -1.02
CSPG4P1Y-201ENST00000306641 ECSCRQ19T08 205 aa8.68□□□□□ -1.02
CSPG4P1Y-201ENST00000306641 FAAP20Q6NZ36 180 aa8.68□□□□□ -1.02
CSPG4P1Y-201ENST00000306641 PPP1R27Q86WC6 154 aa8.68□□□□□ -1.02
CSPG4P1Y-201ENST00000306641 TOMM5Q8N4H5 51 aa8.68□□□□□ -1.02
CSPG4P1Y-201ENST00000306641 COMMD1Q8N668 190 aa8.68□□□□□ -1.02
CSPG4P1Y-201ENST00000306641 GPHA2Q96T91 129 aa8.68□□□□□ -1.02
CSPG4P1Y-201ENST00000306641 SOSTQ9BQB4 213 aa8.68□□□□□ -1.02
CSPG4P1Y-201ENST00000306641 THAP7Q9BT49 309 aaPredicted RBP8.68□□□□□ -1.02
CSPG4P1Y-201ENST00000306641 RSRP1Q9BUV0 290 aa8.68□□□□□ -1.02
CSPG4P1Y-201ENST00000306641 MCUBQ9NWR8 336 aa8.68□□□□□ -1.02
CSPG4P1Y-201ENST00000306641 TCRBV4S1A1TA0A5B7 111 aa8.67□□□□□ -1.02
CSPG4P1Y-201ENST00000306641 ANKRD20A5PA0PJZ0 165 aa8.67□□□□□ -1.02
CSPG4P1Y-201ENST00000306641 RBFOX2O43251 390 aaKnown RBP eCLIP8.67□□□□□ -1.02
CSPG4P1Y-201ENST00000306641 HPRT1P00492 218 aa8.67□□□□□ -1.02
CSPG4P1Y-201ENST00000306641 IGLV2-23P01705 113 aa8.67□□□□□ -1.02
CSPG4P1Y-201ENST00000306641 IGF1P05019 195 aa8.67□□□□□ -1.02
CSPG4P1Y-201ENST00000306641 SAA1P0DJI8 122 aaPredicted RBP8.67□□□□□ -1.02
CSPG4P1Y-201ENST00000306641 ETV6P41212 452 aa8.67□□□□□ -1.02
CSPG4P1Y-201ENST00000306641 ERVK-16P61578 105 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms