RNA–Protein interactions for RNA: ENST00000261789.8

TM9SF1-201, Transcript of transmembrane 9 superfamily member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-201ENST00000261789 IGKV3-15P01624 115 aa13.64□□□□□ -0.23
TM9SF1-201ENST00000261789 OPN1MWP04001 364 aa13.64□□□□□ -0.23
TM9SF1-201ENST00000261789 OPN1MW2P0DN77 364 aa13.64□□□□□ -0.23
TM9SF1-201ENST00000261789 OPN1MW3P0DN78 364 aa13.64□□□□□ -0.23
TM9SF1-201ENST00000261789 EGR1P18146 543 aa13.64□□□□□ -0.23
TM9SF1-201ENST00000261789 HOXC12P31275 282 aa13.64□□□□□ -0.23
TM9SF1-201ENST00000261789 BSXQ3C1V8 233 aa13.64□□□□□ -0.23
TM9SF1-201ENST00000261789 CYP2G1PQ6ZSU1 146 aa13.64□□□□□ -0.23
TM9SF1-201ENST00000261789 CD177Q8N6Q3 437 aa13.64□□□□□ -0.23
TM9SF1-201ENST00000261789 FDCSPQ8NFU4 85 aa13.64□□□□□ -0.23
TM9SF1-201ENST00000261789 AGMATQ9BSE5 352 aa13.64□□□□□ -0.23
TM9SF1-201ENST00000261789 AURKAIP1Q9NWT8 199 aaPredicted RBP13.64□□□□□ -0.23
TM9SF1-201ENST00000261789 EP300Q09472 2414 aaPredicted RBP13.63□□□□□ -0.23
TM9SF1-201ENST00000261789 PTPRBP23467 1997 aa13.63□□□□□ -0.23
TM9SF1-201ENST00000261789 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.63□□□□□ -0.23
TM9SF1-201ENST00000261789 OR9G9P0C7N8 305 aa13.63□□□□□ -0.23
TM9SF1-201ENST00000261789 OR4X1Q8NH49 305 aa13.63□□□□□ -0.23
TM9SF1-201ENST00000261789 DMRT1Q9Y5R6 373 aa13.63□□□□□ -0.23
TM9SF1-201ENST00000261789 PFDN5Q99471 154 aa13.63□□□□□ -0.23
TM9SF1-201ENST00000261789 LAMP3Q9UQV4 416 aa13.63□□□□□ -0.23
TM9SF1-201ENST00000261789 TRAV38-1A0A0B4J264 116 aa13.62□□□□□ -0.23
TM9SF1-201ENST00000261789 RAB29O14966 203 aa13.62□□□□□ -0.23
TM9SF1-201ENST00000261789 LY86O95711 162 aa13.62□□□□□ -0.23
TM9SF1-201ENST00000261789 CRYAAP02489 173 aa13.62□□□□□ -0.23
TM9SF1-201ENST00000261789 PFN1P07737 140 aaKnown RBP13.62□□□□□ -0.23
TM9SF1-201ENST00000261789 COL8A2P25067 703 aa13.62□□□□□ -0.23
TM9SF1-201ENST00000261789 OR10A7Q8NGE5 316 aa13.62□□□□□ -0.23
TM9SF1-201ENST00000261789 OR51G1Q8NGK1 321 aa13.62□□□□□ -0.23
TM9SF1-201ENST00000261789 LRRC29Q8WV35 223 aa13.62□□□□□ -0.23
TM9SF1-201ENST00000261789 FCGR3BO75015 233 aa13.62□□□□□ -0.23
TM9SF1-201ENST00000261789 COX5AP20674 150 aa13.62□□□□□ -0.23
TM9SF1-201ENST00000261789 NPPCP23582 126 aa13.62□□□□□ -0.23
TM9SF1-201ENST00000261789 UBE2G2P60604 165 aa13.62□□□□□ -0.23
TM9SF1-201ENST00000261789 ATP6V1FQ16864 119 aa13.62□□□□□ -0.23
TM9SF1-201ENST00000261789 UTF1Q5T230 341 aa13.62□□□□□ -0.23
TM9SF1-201ENST00000261789 ZNF709Q8N972 641 aa13.62□□□□□ -0.23
TM9SF1-201ENST00000261789 LOXL4Q96JB6 756 aa13.62□□□□□ -0.23
TM9SF1-201ENST00000261789 ACTR3CQ9C0K3 210 aaPredicted RBP13.62□□□□□ -0.23
TM9SF1-201ENST00000261789 CTDSP1Q9GZU7 261 aa13.62□□□□□ -0.23
TM9SF1-201ENST00000261789 IGHV3OR15-7A0A075B7D8 119 aa13.61□□□□□ -0.23
TM9SF1-201ENST00000261789 C15orf62A8K5M9 175 aa13.61□□□□□ -0.23
TM9SF1-201ENST00000261789 GALR1P47211 349 aa13.61□□□□□ -0.23
TM9SF1-201ENST00000261789 SPRNQ5BIV9 151 aa13.61□□□□□ -0.23
TM9SF1-201ENST00000261789 R3HDM4Q96D70 268 aa13.61□□□□□ -0.23
TM9SF1-201ENST00000261789 PCGF1Q9BSM1 259 aa13.61□□□□□ -0.23
TM9SF1-201ENST00000261789 PRDM13Q9H4Q3 707 aa13.61□□□□□ -0.23
TM9SF1-201ENST00000261789 C15orf65H3BRN8 121 aa13.61□□□□□ -0.23
TM9SF1-201ENST00000261789 EDDM3BP56851 147 aa13.61□□□□□ -0.23
TM9SF1-201ENST00000261789 GAMTQ14353 236 aa13.61□□□□□ -0.23
TM9SF1-201ENST00000261789 GUSBP1Q15486 140 aa13.61□□□□□ -0.23
TM9SF1-201ENST00000261789 LRP11Q86VZ4 500 aa13.61□□□□□ -0.23
TM9SF1-201ENST00000261789 Q8N7P7 452 aa13.61□□□□□ -0.23
TM9SF1-201ENST00000261789 OR2Z1Q8NG97 314 aa13.61□□□□□ -0.23
TM9SF1-201ENST00000261789 ELOA3CA0A087WX78 387 aaPredicted RBP13.6□□□□□ -0.23
TM9SF1-201ENST00000261789 A0A1W2PPQ1 181 aa13.6□□□□□ -0.23
TM9SF1-201ENST00000261789 SMCO3A2RU48 225 aa13.6□□□□□ -0.23
TM9SF1-201ENST00000261789 H7BYZ3 331 aa13.6□□□□□ -0.23
TM9SF1-201ENST00000261789 PRSS8Q16651 343 aa13.6□□□□□ -0.23
TM9SF1-201ENST00000261789 SMIM21Q3B7S5 101 aa13.6□□□□□ -0.23
TM9SF1-201ENST00000261789 RPL39P5Q59GN2 51 aa13.6□□□□□ -0.23
TM9SF1-201ENST00000261789 RHOVQ96L33 236 aa13.6□□□□□ -0.23
TM9SF1-201ENST00000261789 PACRGQ96M98 296 aaPredicted RBP13.6□□□□□ -0.23
TM9SF1-201ENST00000261789 HIST1H2BLQ99880 126 aa13.6□□□□□ -0.23
TM9SF1-201ENST00000261789 MRPL37Q9BZE1 423 aaKnown RBP13.6□□□□□ -0.23
TM9SF1-201ENST00000261789 OPN3Q9H1Y3 402 aaPredicted RBP13.6□□□□□ -0.23
TM9SF1-201ENST00000261789 DUSP13Q9UII6 198 aa13.6□□□□□ -0.23
TM9SF1-201ENST00000261789 RP1L1Q8IWN7 2480 aaPredicted RBP13.6□□□□□ -0.23
TM9SF1-201ENST00000261789 TET2Q6N021 2002 aaPredicted RBP13.6□□□□□ -0.23
TM9SF1-201ENST00000261789 PRDX2P32119 198 aa13.59□□□□□ -0.23
TM9SF1-201ENST00000261789 PMS2P11Q13670 270 aa13.59□□□□□ -0.23
TM9SF1-201ENST00000261789 MSMPQ1L6U9 139 aa13.59□□□□□ -0.23
TM9SF1-201ENST00000261789 PRR7Q8TB68 274 aa13.59□□□□□ -0.23
TM9SF1-201ENST00000261789 Q8TCH9 128 aa13.59□□□□□ -0.23
TM9SF1-201ENST00000261789 LEAP2Q969E1 77 aa13.59□□□□□ -0.23
TM9SF1-201ENST00000261789 LURAP1Q96LR2 239 aa13.59□□□□□ -0.23
TM9SF1-201ENST00000261789 TAAR6Q96RI8 345 aa13.59□□□□□ -0.23
TM9SF1-201ENST00000261789 PATZ1Q9HBE1 687 aaKnown RBP13.59□□□□□ -0.23
TM9SF1-201ENST00000261789 GNG12Q9UBI6 72 aa13.59□□□□□ -0.23
TM9SF1-201ENST00000261789 TRAV3A0A0B4J244 114 aa13.59□□□□□ -0.23
TM9SF1-201ENST00000261789 TMEM250H0YL14 139 aa13.59□□□□□ -0.23
TM9SF1-201ENST00000261789 SPINT2O43291 252 aa13.59□□□□□ -0.23
TM9SF1-201ENST00000261789 MBP02144 154 aa13.59□□□□□ -0.23
TM9SF1-201ENST00000261789 GYPAP02724 150 aa13.59□□□□□ -0.23
TM9SF1-201ENST00000261789 WT1P19544 449 aaPredicted RBP13.59□□□□□ -0.23
TM9SF1-201ENST00000261789 GCH1P30793 250 aa13.59□□□□□ -0.23
TM9SF1-201ENST00000261789 GPR12P47775 334 aa13.59□□□□□ -0.23
TM9SF1-201ENST00000261789 ZNF134P52741 427 aa13.59□□□□□ -0.23
TM9SF1-201ENST00000261789 P2RY6Q15077 328 aa13.59□□□□□ -0.23
TM9SF1-201ENST00000261789 ZNRF1Q8ND25 227 aa13.59□□□□□ -0.23
TM9SF1-201ENST00000261789 CIB3Q96Q77 187 aaPredicted RBP13.59□□□□□ -0.23
TM9SF1-201ENST00000261789 HSD17B10Q99714 261 aaKnown RBP13.59□□□□□ -0.23
TM9SF1-201ENST00000261789 DERL1Q9BUN8 251 aa13.59□□□□□ -0.23
TM9SF1-201ENST00000261789 OR6C3Q9NZP0 311 aa13.59□□□□□ -0.23
TM9SF1-201ENST00000261789 CNOT1A5YKK6 2376 aaKnown RBP13.59□□□□□ -0.23
TM9SF1-201ENST00000261789 IGHV1-18A0A0C4DH31 117 aa13.58□□□□□ -0.23
TM9SF1-201ENST00000261789 C11orf94C9JXX5 98 aa13.58□□□□□ -0.23
TM9SF1-201ENST00000261789 IGHG3P01860 377 aa13.58□□□□□ -0.23
TM9SF1-201ENST00000261789 DUTP33316 252 aaKnown RBP13.58□□□□□ -0.23
TM9SF1-201ENST00000261789 ATP5G3P48201 142 aa13.58□□□□□ -0.23
TM9SF1-201ENST00000261789 CDC34P49427 236 aaPredicted RBP13.58□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms