RNA–Protein interactions for RNA: ENST00000216211.8

UPK3A-201, Transcript of uroplakin 3A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UPK3A, Length 1,051 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3A-201ENST00000216211 CHATP28329 748 aa11.68□□□□□ -0.54
UPK3A-201ENST00000216211 KIAA0141Q14154 515 aaPredicted RBP11.68□□□□□ -0.54
UPK3A-201ENST00000216211 HMGN3Q15651 99 aa11.68□□□□□ -0.54
UPK3A-201ENST00000216211 MOGAT2Q3SYC2 334 aa11.68□□□□□ -0.54
UPK3A-201ENST00000216211 ZNF260Q3ZCT1 412 aa11.68□□□□□ -0.54
UPK3A-201ENST00000216211 TMEM65Q6PI78 240 aa11.68□□□□□ -0.54
UPK3A-201ENST00000216211 ZNF833PQ6ZTB9 187 aa11.68□□□□□ -0.54
UPK3A-201ENST00000216211 C6orf201Q7Z4U5 140 aa11.68□□□□□ -0.54
UPK3A-201ENST00000216211 FAM89BQ8N5H3 189 aa11.68□□□□□ -0.54
UPK3A-201ENST00000216211 ZNF491Q8N8L2 437 aa11.68□□□□□ -0.54
UPK3A-201ENST00000216211 MYOZ3Q8TDC0 251 aa11.68□□□□□ -0.54
UPK3A-201ENST00000216211 CHAC2Q8WUX2 184 aa11.68□□□□□ -0.54
UPK3A-201ENST00000216211 URM1Q9BTM9 101 aaKnown RBP11.68□□□□□ -0.54
UPK3A-201ENST00000216211 OR51J1Q9H342 316 aa11.68□□□□□ -0.54
UPK3A-201ENST00000216211 TAS2R8Q9NYW2 309 aa11.68□□□□□ -0.54
UPK3A-201ENST00000216211 KLK11Q9UBX7 282 aa11.68□□□□□ -0.54
UPK3A-201ENST00000216211 LSM4Q9Y4Z0 139 aaKnown RBP11.68□□□□□ -0.54
UPK3A-201ENST00000216211 I3L521 148 aa11.67□□□□□ -0.54
UPK3A-201ENST00000216211 HLA-DRB1P01911 266 aa11.67□□□□□ -0.54
UPK3A-201ENST00000216211 BTCP35070 178 aa11.67□□□□□ -0.54
UPK3A-201ENST00000216211 RPS27AP62979 156 aaKnown RBP11.67□□□□□ -0.54
UPK3A-201ENST00000216211 LY6G6FQ5SQ64 297 aa11.67□□□□□ -0.54
UPK3A-201ENST00000216211 PLET1Q6UQ28 207 aa11.67□□□□□ -0.54
UPK3A-201ENST00000216211 OR2AK2Q8NG84 335 aa11.67□□□□□ -0.54
UPK3A-201ENST00000216211 OR10R2Q8NGX6 335 aa11.67□□□□□ -0.54
UPK3A-201ENST00000216211 IL1F10Q8WWZ1 152 aa11.67□□□□□ -0.54
UPK3A-201ENST00000216211 UBE2E2Q96LR5 201 aa11.67□□□□□ -0.54
UPK3A-201ENST00000216211 OR5B12Q96R08 314 aa11.67□□□□□ -0.54
UPK3A-201ENST00000216211 NICN1Q9BSH3 213 aa11.67□□□□□ -0.54
UPK3A-201ENST00000216211 TM2D1Q9BX74 207 aa11.67□□□□□ -0.54
UPK3A-201ENST00000216211 TMEM59Q9BXS4 323 aa11.67□□□□□ -0.54
UPK3A-201ENST00000216211 IFI27L2Q9H2X8 130 aa11.67□□□□□ -0.54
UPK3A-201ENST00000216211 A0A0A6YYD4 124 aa11.66□□□□□ -0.54
UPK3A-201ENST00000216211 TRAV41A0A0B4J266 112 aa11.66□□□□□ -0.54
UPK3A-201ENST00000216211 ST8SIA5O15466 376 aa11.66□□□□□ -0.54
UPK3A-201ENST00000216211 IGLV1-40P01703 118 aa11.66□□□□□ -0.54
UPK3A-201ENST00000216211 OR8U8P0C7N1 319 aa11.66□□□□□ -0.54
UPK3A-201ENST00000216211 BLVRBP30043 206 aaPredicted RBP11.66□□□□□ -0.54
UPK3A-201ENST00000216211 VEGFCP49767 419 aa11.66□□□□□ -0.54
UPK3A-201ENST00000216211 GNB1P62873 340 aa11.66□□□□□ -0.54
UPK3A-201ENST00000216211 C5orf64Q2M2E5 130 aa11.66□□□□□ -0.54
UPK3A-201ENST00000216211 ASPHD1Q5U4P2 390 aa11.66□□□□□ -0.54
UPK3A-201ENST00000216211 LIN54Q6MZP7 749 aa11.66□□□□□ -0.54
UPK3A-201ENST00000216211 NPBQ8NG41 125 aa11.66□□□□□ -0.54
UPK3A-201ENST00000216211 OR56B1Q8NGI3 324 aa11.66□□□□□ -0.54
UPK3A-201ENST00000216211 OR1N2Q8NGR9 330 aa11.66□□□□□ -0.54
UPK3A-201ENST00000216211 MARVELD1Q9BSK0 173 aa11.66□□□□□ -0.54
UPK3A-201ENST00000216211 CHMP1AQ9HD42 196 aaPredicted RBP11.66□□□□□ -0.54
UPK3A-201ENST00000216211 HRASLSQ9HDD0 168 aa11.66□□□□□ -0.54
UPK3A-201ENST00000216211 KIAA1456Q9P272 454 aa11.66□□□□□ -0.54
UPK3A-201ENST00000216211 COPZ2Q9P299 210 aa11.66□□□□□ -0.54
UPK3A-201ENST00000216211 VSIG4Q9Y279 399 aa11.66□□□□□ -0.54
UPK3A-201ENST00000216211 HUWE1Q7Z6Z7 4374 aaKnown RBP11.65□□□□□ -0.54
UPK3A-201ENST00000216211 FOXI3A8MTJ6 420 aaPredicted RBP11.65□□□□□ -0.54
UPK3A-201ENST00000216211 NDUFA3O95167 84 aa11.65□□□□□ -0.54
UPK3A-201ENST00000216211 GSTP1P09211 210 aaKnown RBP11.65□□□□□ -0.54
UPK3A-201ENST00000216211 NHLRC4P0CG21 123 aaPredicted RBP11.65□□□□□ -0.54
UPK3A-201ENST00000216211 RAB9AP51151 201 aa11.65□□□□□ -0.54
UPK3A-201ENST00000216211 NDPQ00604 133 aa11.65□□□□□ -0.54
UPK3A-201ENST00000216211 ZNF616Q08AN1 781 aa11.65□□□□□ -0.54
UPK3A-201ENST00000216211 CDNFQ49AH0 187 aa11.65□□□□□ -0.54
UPK3A-201ENST00000216211 RPL39P5Q59GN2 51 aa11.65□□□□□ -0.54
UPK3A-201ENST00000216211 GLDNQ6ZMI3 551 aaPredicted RBP11.65□□□□□ -0.54
UPK3A-201ENST00000216211 TMEM229BQ8NBD8 167 aa11.65□□□□□ -0.54
UPK3A-201ENST00000216211 ASCL2Q99929 193 aa11.65□□□□□ -0.54
UPK3A-201ENST00000216211 NEURL2Q9BR09 285 aa11.65□□□□□ -0.54
UPK3A-201ENST00000216211 FBXO7Q9Y3I1 522 aa11.65□□□□□ -0.54
UPK3A-201ENST00000216211 NAPSAO96009 420 aa11.64□□□□□ -0.55
UPK3A-201ENST00000216211 TMEM50BP56557 158 aa11.64□□□□□ -0.55
UPK3A-201ENST00000216211 RUNX1Q01196 453 aa11.64□□□□□ -0.55
UPK3A-201ENST00000216211 ARL6IP1Q15041 203 aa11.64□□□□□ -0.55
UPK3A-201ENST00000216211 ECSCRQ19T08 205 aa11.64□□□□□ -0.55
UPK3A-201ENST00000216211 FAM71F2Q6NXP2 309 aa11.64□□□□□ -0.55
UPK3A-201ENST00000216211 ZNF880Q6PDB4 577 aa11.64□□□□□ -0.55
UPK3A-201ENST00000216211 PARP12Q9H0J9 701 aaKnown RBP11.64□□□□□ -0.55
UPK3A-201ENST00000216211 ALX4Q9H161 411 aaPredicted RBP11.64□□□□□ -0.55
UPK3A-201ENST00000216211 FBXL15Q9H469 300 aa11.64□□□□□ -0.55
UPK3A-201ENST00000216211 PIPOXQ9P0Z9 390 aa11.64□□□□□ -0.55
UPK3A-201ENST00000216211 ZNF256Q9Y2P7 627 aaPredicted RBP11.64□□□□□ -0.55
UPK3A-201ENST00000216211 NUBP2Q9Y5Y2 271 aa11.64□□□□□ -0.55
UPK3A-201ENST00000216211 U3KQK5 164 aa11.64□□□□□ -0.55
UPK3A-201ENST00000216211 SORL1Q92673 2214 aa11.63□□□□□ -0.55
UPK3A-201ENST00000216211 A0A1W2PN81 502 aa11.63□□□□□ -0.55
UPK3A-201ENST00000216211 TMEM235A6NFC5 223 aa11.63□□□□□ -0.55
UPK3A-201ENST00000216211 INMT-MINDY4F8WBC2 141 aa11.63□□□□□ -0.55
UPK3A-201ENST00000216211 RAB29O14966 203 aa11.63□□□□□ -0.55
UPK3A-201ENST00000216211 SOCS1O15524 211 aa11.63□□□□□ -0.55
UPK3A-201ENST00000216211 LY86O95711 162 aa11.63□□□□□ -0.55
UPK3A-201ENST00000216211 TCRBP04435 133 aa11.63□□□□□ -0.55
UPK3A-201ENST00000216211 AKAIN1P0CW23 69 aa11.63□□□□□ -0.55
UPK3A-201ENST00000216211 CT45A6P0DMU7 189 aa11.63□□□□□ -0.55
UPK3A-201ENST00000216211 CT45A5P0DMU8 189 aa11.63□□□□□ -0.55
UPK3A-201ENST00000216211 CT45A7P0DMV0 189 aa11.63□□□□□ -0.55
UPK3A-201ENST00000216211 HIST1H1DP16402 221 aaKnown RBP11.63□□□□□ -0.55
UPK3A-201ENST00000216211 FAUP35544 74 aaKnown RBP11.63□□□□□ -0.55
UPK3A-201ENST00000216211 CHRNA7P36544 502 aa11.63□□□□□ -0.55
UPK3A-201ENST00000216211 CASTOR1Q8WTX7 329 aa11.63□□□□□ -0.55
UPK3A-201ENST00000216211 DCUN1D4Q92564 292 aa11.63□□□□□ -0.55
UPK3A-201ENST00000216211 RAB3CQ96E17 227 aa11.63□□□□□ -0.55
UPK3A-201ENST00000216211 ABHD14BQ96IU4 210 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms