RNA–Protein interactions for RNA: ENST00000612795.1

CSNK1E-215, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-215ENST00000612795 HARBI1Q96MB7 349 aa12.91□□□□□ -0.34
CSNK1E-215ENST00000612795 MRPS18AQ9NVS2 196 aaKnown RBP12.91□□□□□ -0.34
CSNK1E-215ENST00000612795 TECRQ9NZ01 308 aaKnown RBP12.91□□□□□ -0.34
CSNK1E-215ENST00000612795 OR1A1Q9P1Q5 309 aa12.91□□□□□ -0.34
CSNK1E-215ENST00000612795 C2orf70A6NJV1 201 aa12.9□□□□□ -0.34
CSNK1E-215ENST00000612795 FAM223BA6NKX1 122 aa12.9□□□□□ -0.34
CSNK1E-215ENST00000612795 MPPED1O15442 326 aa12.9□□□□□ -0.34
CSNK1E-215ENST00000612795 RBMXL2O75526 392 aaKnown RBP12.9□□□□□ -0.34
CSNK1E-215ENST00000612795 TUSC2O75896 110 aa12.9□□□□□ -0.34
CSNK1E-215ENST00000612795 OR9G9P0C7N8 305 aa12.9□□□□□ -0.34
CSNK1E-215ENST00000612795 FOLR2P14207 255 aa12.9□□□□□ -0.34
CSNK1E-215ENST00000612795 KIR2DS2P43631 304 aa12.9□□□□□ -0.34
CSNK1E-215ENST00000612795 RHOGP84095 191 aa12.9□□□□□ -0.34
CSNK1E-215ENST00000612795 EWSR1Q01844 656 aaKnown RBP eCLIP12.9□□□□□ -0.34
CSNK1E-215ENST00000612795 LYG2Q86SG7 212 aa12.9□□□□□ -0.34
CSNK1E-215ENST00000612795 FAM223AQ8IWN6 122 aa12.9□□□□□ -0.34
CSNK1E-215ENST00000612795 NKAIN3Q8N8D7 197 aa12.9□□□□□ -0.34
CSNK1E-215ENST00000612795 ADAD2Q8NCV1 583 aaKnown RBP12.9□□□□□ -0.34
CSNK1E-215ENST00000612795 OR52B4Q8NGK2 314 aa12.9□□□□□ -0.34
CSNK1E-215ENST00000612795 FGF20Q9NP95 211 aaPredicted RBP12.9□□□□□ -0.34
CSNK1E-215ENST00000612795 BABAM2Q9NXR7 383 aa12.9□□□□□ -0.34
CSNK1E-215ENST00000612795 GHRLQ9UBU3 117 aa12.9□□□□□ -0.34
CSNK1E-215ENST00000612795 ZNF230Q9UIE0 474 aaPredicted RBP12.9□□□□□ -0.34
CSNK1E-215ENST00000612795 TRBV5-7A0A0A0MS05 114 aa12.89□□□□□ -0.35
CSNK1E-215ENST00000612795 M0R1X1 148 aa12.89□□□□□ -0.35
CSNK1E-215ENST00000612795 DYNC1I1O14576 645 aa12.89□□□□□ -0.35
CSNK1E-215ENST00000612795 NAPSAO96009 420 aa12.89□□□□□ -0.35
CSNK1E-215ENST00000612795 LALBAP00709 142 aa12.89□□□□□ -0.35
CSNK1E-215ENST00000612795 IGLV2-23P01705 113 aa12.89□□□□□ -0.35
CSNK1E-215ENST00000612795 EDN2P20800 178 aa12.89□□□□□ -0.35
CSNK1E-215ENST00000612795 HLA-DRB3P79483 266 aa12.89□□□□□ -0.35
CSNK1E-215ENST00000612795 ATP5G2Q06055 141 aa12.89□□□□□ -0.35
CSNK1E-215ENST00000612795 TNFRSF9Q07011 255 aa12.89□□□□□ -0.35
CSNK1E-215ENST00000612795 CBX3Q13185 183 aa12.89□□□□□ -0.35
CSNK1E-215ENST00000612795 ZNF880Q6PDB4 577 aa12.89□□□□□ -0.35
CSNK1E-215ENST00000612795 ZFP41Q8N8Y5 198 aa12.89□□□□□ -0.35
CSNK1E-215ENST00000612795 UQCC2Q9BRT2 126 aa12.89□□□□□ -0.35
CSNK1E-215ENST00000612795 AKIP1Q9NQ31 210 aa12.89□□□□□ -0.35
CSNK1E-215ENST00000612795 SELENOKQ9Y6D0 94 aa12.89□□□□□ -0.35
CSNK1E-215ENST00000612795 PROP1O75360 226 aa12.88□□□□□ -0.35
CSNK1E-215ENST00000612795 MYL12AP19105 171 aa12.88□□□□□ -0.35
CSNK1E-215ENST00000612795 DCKP27707 260 aa12.88□□□□□ -0.35
CSNK1E-215ENST00000612795 RPS11P62280 158 aaKnown RBP eCLIP12.88□□□□□ -0.35
CSNK1E-215ENST00000612795 LGALS9CQ6DKI2 356 aa12.88□□□□□ -0.35
CSNK1E-215ENST00000612795 KCNG3Q8TAE7 436 aa12.88□□□□□ -0.35
CSNK1E-215ENST00000612795 SLC29A1Q99808 456 aa12.88□□□□□ -0.35
CSNK1E-215ENST00000612795 TMEM59Q9BXS4 323 aa12.88□□□□□ -0.35
CSNK1E-215ENST00000612795 KIAA1109Q2LD37 5005 aa12.88□□□□□ -0.35
CSNK1E-215ENST00000612795 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.87□□□□□ -0.35
CSNK1E-215ENST00000612795 MSGN1A6NI15 193 aa12.87□□□□□ -0.35
CSNK1E-215ENST00000612795 SHOXO15266 292 aa12.87□□□□□ -0.35
CSNK1E-215ENST00000612795 PRH1P02810 166 aa12.87□□□□□ -0.35
CSNK1E-215ENST00000612795 CRYGBP07316 175 aa12.87□□□□□ -0.35
CSNK1E-215ENST00000612795 UBBP0CG47 229 aa12.87□□□□□ -0.35
CSNK1E-215ENST00000612795 BMI1P35226 326 aa12.87□□□□□ -0.35
CSNK1E-215ENST00000612795 TNXAQ16473 311 aa12.87□□□□□ -0.35
CSNK1E-215ENST00000612795 OR10K2Q6IF99 312 aa12.87□□□□□ -0.35
CSNK1E-215ENST00000612795 TMEM61Q8N0U2 210 aa12.87□□□□□ -0.35
CSNK1E-215ENST00000612795 CACNG8Q8WXS5 425 aa12.87□□□□□ -0.35
CSNK1E-215ENST00000612795 PTX4Q96A99 478 aa12.87□□□□□ -0.35
CSNK1E-215ENST00000612795 PGLYRP3Q96LB9 341 aa12.87□□□□□ -0.35
CSNK1E-215ENST00000612795 PNMA8CA0A1B0GUJ8 204 aa12.86□□□□□ -0.35
CSNK1E-215ENST00000612795 PPP5D1E7EU14 171 aa12.86□□□□□ -0.35
CSNK1E-215ENST00000612795 RPS27AP62979 156 aaKnown RBP12.86□□□□□ -0.35
CSNK1E-215ENST00000612795 SMN1Q16637 294 aaKnown RBP12.86□□□□□ -0.35
CSNK1E-215ENST00000612795 ANKRD55Q3KP44 614 aa12.86□□□□□ -0.35
CSNK1E-215ENST00000612795 ZNF57Q68EA5 555 aaPredicted RBP12.86□□□□□ -0.35
CSNK1E-215ENST00000612795 WFDC3Q8IUB2 231 aa12.86□□□□□ -0.35
CSNK1E-215ENST00000612795 CBR4Q8N4T8 237 aa12.86□□□□□ -0.35
CSNK1E-215ENST00000612795 APH1BQ8WW43 257 aa12.86□□□□□ -0.35
CSNK1E-215ENST00000612795 PYDC1Q8WXC3 89 aa12.86□□□□□ -0.35
CSNK1E-215ENST00000612795 SRSF12Q8WXF0 261 aaKnown RBP12.86□□□□□ -0.35
CSNK1E-215ENST00000612795 ACOT12Q8WYK0 555 aa12.86□□□□□ -0.35
CSNK1E-215ENST00000612795 DERL3Q96Q80 235 aa12.86□□□□□ -0.35
CSNK1E-215ENST00000612795 RIMS4Q9H426 269 aaPredicted RBP12.86□□□□□ -0.35
CSNK1E-215ENST00000612795 PLEKHJ1Q9NW61 149 aa12.86□□□□□ -0.35
CSNK1E-215ENST00000612795 MGAT4AQ9UM21 535 aa12.86□□□□□ -0.35
CSNK1E-215ENST00000612795 TP53TG1Q9Y2A0 90 aa12.86□□□□□ -0.35
CSNK1E-215ENST00000612795 SPRY2O43597 315 aa12.85□□□□□ -0.35
CSNK1E-215ENST00000612795 HLA-AP01891 365 aaKnown RBP12.85□□□□□ -0.35
CSNK1E-215ENST00000612795 APOC4P55056 127 aa12.85□□□□□ -0.35
CSNK1E-215ENST00000612795 DEFB135Q30KP9 77 aa12.85□□□□□ -0.35
CSNK1E-215ENST00000612795 FAM209BQ5JX69 171 aa12.85□□□□□ -0.35
CSNK1E-215ENST00000612795 TMEM217Q8N7C4 229 aa12.85□□□□□ -0.35
CSNK1E-215ENST00000612795 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.85□□□□□ -0.35
CSNK1E-215ENST00000612795 NICN1Q9BSH3 213 aa12.85□□□□□ -0.35
CSNK1E-215ENST00000612795 HDHD3Q9BSH5 251 aaPredicted RBP12.85□□□□□ -0.35
CSNK1E-215ENST00000612795 EXOSC1Q9Y3B2 195 aaKnown RBP12.85□□□□□ -0.35
CSNK1E-215ENST00000612795 RYR1P21817 5038 aa12.85□□□□□ -0.35
CSNK1E-215ENST00000612795 LOC100130705A0A1B0GUX0 176 aa12.84□□□□□ -0.35
CSNK1E-215ENST00000612795 IRGMA1A4Y4 181 aa12.84□□□□□ -0.35
CSNK1E-215ENST00000612795 LGALS9O00182 355 aa12.84□□□□□ -0.35
CSNK1E-215ENST00000612795 GGCTO75223 188 aaKnown RBP12.84□□□□□ -0.35
CSNK1E-215ENST00000612795 CIB2O75838 187 aa12.84□□□□□ -0.35
CSNK1E-215ENST00000612795 SCAF4O95104 1147 aaKnown RBP12.84□□□□□ -0.35
CSNK1E-215ENST00000612795 SCTP09683 121 aa12.84□□□□□ -0.35
CSNK1E-215ENST00000612795 ATF4P18848 351 aaPredicted RBP12.84□□□□□ -0.35
CSNK1E-215ENST00000612795 CBLN1P23435 193 aa12.84□□□□□ -0.35
CSNK1E-215ENST00000612795 HTR2CP28335 458 aa12.84□□□□□ -0.35
CSNK1E-215ENST00000612795 MAP2K4P45985 399 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms