RNA–Protein interactions for RNA: ENST00000596378.1

SRRM1-222, Transcript of serine and arginine repetitive matrix 1, human

TSL 1 (best)

Gene SRRM1, Length 2,314 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SRRM1-222	ENST00000596378	FAM24B	Q8N5W8	94 aa		18.86	■□□□□ 0.61
SRRM1-222	ENST00000596378	EGLN1	Q9GZT9	426 aa		18.86	■□□□□ 0.61
SRRM1-222	ENST00000596378	ZFP92	A6NM28	416 aa		18.86	■□□□□ 0.61
SRRM1-222	ENST00000596378	RPL35	P42766	123 aa	Known RBP	18.86	■□□□□ 0.61
SRRM1-222	ENST00000596378	AKR1D1	P51857	326 aa		18.86	■□□□□ 0.61
SRRM1-222	ENST00000596378	RAB2A	P61019	212 aa		18.86	■□□□□ 0.61
SRRM1-222	ENST00000596378	DUX4L9	Q6RFH8	374 aa	Predicted RBP	18.86	■□□□□ 0.61
SRRM1-222	ENST00000596378	TAF15	Q92804	592 aa	Known RBP eCLIP	18.86	■□□□□ 0.61
SRRM1-222	ENST00000596378	RCC1L	Q96I51	464 aa	Known RBP	18.86	■□□□□ 0.61
SRRM1-222	ENST00000596378	PSMG3	Q9BT73	122 aa	Predicted RBP	18.86	■□□□□ 0.61
SRRM1-222	ENST00000596378	ADH4	P08319	380 aa		18.85	■□□□□ 0.61
SRRM1-222	ENST00000596378	GPR12	P47775	334 aa		18.85	■□□□□ 0.61
SRRM1-222	ENST00000596378	ZNF787	Q6DD87	383 aa		18.85	■□□□□ 0.61
SRRM1-222	ENST00000596378	ZNF66	Q6ZN08	573 aa		18.85	■□□□□ 0.61
SRRM1-222	ENST00000596378	DTD1	Q8TEA8	209 aa		18.85	■□□□□ 0.61
SRRM1-222	ENST00000596378	HSD17B10	Q99714	261 aa	Known RBP	18.85	■□□□□ 0.61
SRRM1-222	ENST00000596378	MRPL37	Q9BZE1	423 aa	Known RBP	18.85	■□□□□ 0.61
SRRM1-222	ENST00000596378	MUC6	Q6W4X9	2439 aa		18.85	■□□□□ 0.61
SRRM1-222	ENST00000596378	MARCH11	A6NNE9	402 aa		18.85	■□□□□ 0.61
SRRM1-222	ENST00000596378	MGST3	O14880	152 aa		18.85	■□□□□ 0.61
SRRM1-222	ENST00000596378	TIMP3	P35625	211 aa		18.85	■□□□□ 0.61
SRRM1-222	ENST00000596378	NUBP1	P53384	320 aa		18.85	■□□□□ 0.61
SRRM1-222	ENST00000596378	PAX5	Q02548	391 aa		18.85	■□□□□ 0.61
SRRM1-222	ENST00000596378	MORN2	Q502X0	79 aa		18.85	■□□□□ 0.61
SRRM1-222	ENST00000596378	SNX22	Q96L94	193 aa		18.85	■□□□□ 0.61
SRRM1-222	ENST00000596378	HIPK2	Q9H2X6	1198 aa		18.85	■□□□□ 0.61
SRRM1-222	ENST00000596378	LOC102723971	A0A1B0GUV8	181 aa		18.84	■□□□□ 0.61
SRRM1-222	ENST00000596378	RAB29	O14966	203 aa		18.84	■□□□□ 0.61
SRRM1-222	ENST00000596378	HSPB1	P04792	205 aa	Known RBP	18.84	■□□□□ 0.61
SRRM1-222	ENST00000596378	ZNF134	P52741	427 aa		18.84	■□□□□ 0.61
SRRM1-222	ENST00000596378	OR2B8P	P59922	312 aa		18.84	■□□□□ 0.61
SRRM1-222	ENST00000596378	RPL39P5	Q59GN2	51 aa		18.84	■□□□□ 0.61
SRRM1-222	ENST00000596378	LEAP2	Q969E1	77 aa		18.84	■□□□□ 0.61
SRRM1-222	ENST00000596378	RAB39B	Q96DA2	213 aa		18.84	■□□□□ 0.61
SRRM1-222	ENST00000596378	HCFC1	P51610	2035 aa		18.84	■□□□□ 0.61
SRRM1-222	ENST00000596378	PIEZO2	Q9H5I5	2752 aa		18.84	■□□□□ 0.61
SRRM1-222	ENST00000596378	TRAV1-1	A0A0B4J248	108 aa		18.84	■□□□□ 0.61
SRRM1-222	ENST00000596378	FCGR3B	O75015	233 aa		18.84	■□□□□ 0.61
SRRM1-222	ENST00000596378	FOLR2	P14207	255 aa		18.84	■□□□□ 0.61
SRRM1-222	ENST00000596378	DUT	P33316	252 aa	Known RBP	18.84	■□□□□ 0.61
SRRM1-222	ENST00000596378	RPS23	P62266	143 aa	Known RBP	18.84	■□□□□ 0.61
SRRM1-222	ENST00000596378	TRAT1	Q6PIZ9	186 aa		18.84	■□□□□ 0.61
SRRM1-222	ENST00000596378	SSX9	Q7RTT3	188 aa		18.84	■□□□□ 0.61
SRRM1-222	ENST00000596378	ZNF429	Q86V71	674 aa		18.84	■□□□□ 0.61
SRRM1-222	ENST00000596378	ZNF727	A8MUV8	499 aa		18.83	■□□□□ 0.61
SRRM1-222	ENST00000596378	IGKV1D-33	P01593	117 aa		18.83	■□□□□ 0.61
SRRM1-222	ENST00000596378	IGKV1-33	P01594	117 aa		18.83	■□□□□ 0.61
SRRM1-222	ENST00000596378	MT-ND4L	P03901	98 aa		18.83	■□□□□ 0.61
SRRM1-222	ENST00000596378	GZMH	P20718	246 aa		18.83	■□□□□ 0.61
SRRM1-222	ENST00000596378	R3HDM4	Q96D70	268 aa		18.83	■□□□□ 0.61
SRRM1-222	ENST00000596378	QTRT1	Q9BXR0	403 aa	Known RBP	18.83	■□□□□ 0.61
SRRM1-222	ENST00000596378	TUBA4B	Q9H853	241 aa		18.83	■□□□□ 0.61
SRRM1-222	ENST00000596378	BIN3	Q9NQY0	253 aa		18.83	■□□□□ 0.61
SRRM1-222	ENST00000596378	PMS2P5	A8MQ11	134 aa		18.83	■□□□□ 0.6
SRRM1-222	ENST00000596378	LHB	P01229	141 aa		18.83	■□□□□ 0.6
SRRM1-222	ENST00000596378	CRYAB	P02511	175 aa	Known RBP	18.83	■□□□□ 0.6
SRRM1-222	ENST00000596378	OR8U8	P0C7N1	319 aa		18.83	■□□□□ 0.6
SRRM1-222	ENST00000596378	OR9G9	P0C7N8	305 aa		18.83	■□□□□ 0.6
SRRM1-222	ENST00000596378	PTAFR	P25105	342 aa		18.83	■□□□□ 0.6
SRRM1-222	ENST00000596378	CFHR2	P36980	270 aa		18.83	■□□□□ 0.6
SRRM1-222	ENST00000596378	LOXL3	P58215	753 aa		18.83	■□□□□ 0.6
SRRM1-222	ENST00000596378	KLF2	Q9Y5W3	355 aa	Predicted RBP	18.83	■□□□□ 0.6
SRRM1-222	ENST00000596378	IGLV3-9	A0A075B6K5	115 aa		18.82	■□□□□ 0.6
SRRM1-222	ENST00000596378	CEBPZOS	A8MTT3	80 aa		18.82	■□□□□ 0.6
SRRM1-222	ENST00000596378	KHDC3L	Q587J8	217 aa		18.82	■□□□□ 0.6
SRRM1-222	ENST00000596378	TMEM41B	Q5BJD5	291 aa		18.82	■□□□□ 0.6
SRRM1-222	ENST00000596378	FAM90A1	Q86YD7	464 aa		18.82	■□□□□ 0.6
SRRM1-222	ENST00000596378	LINC00518	Q8N0U6	118 aa		18.82	■□□□□ 0.6
SRRM1-222	ENST00000596378	VKORC1L1	Q8N0U8	176 aa		18.82	■□□□□ 0.6
SRRM1-222	ENST00000596378	FAM57A	Q8TBR7	257 aa		18.82	■□□□□ 0.6
SRRM1-222	ENST00000596378	EDARADD	Q8WWZ3	215 aa		18.82	■□□□□ 0.6
SRRM1-222	ENST00000596378	SFXN3	Q9BWM7	321 aa		18.82	■□□□□ 0.6
SRRM1-222	ENST00000596378	RAI1	Q7Z5J4	1906 aa	Predicted RBP	18.82	■□□□□ 0.6
SRRM1-222	ENST00000596378		A0A1W2PPE3	182 aa		18.82	■□□□□ 0.6
SRRM1-222	ENST00000596378		M0R1X1	148 aa		18.82	■□□□□ 0.6
SRRM1-222	ENST00000596378	SLC31A2	O15432	143 aa		18.82	■□□□□ 0.6
SRRM1-222	ENST00000596378	CEACAM8	P31997	349 aa	Predicted RBP	18.82	■□□□□ 0.6
SRRM1-222	ENST00000596378	SERF2	P84101	59 aa		18.82	■□□□□ 0.6
SRRM1-222	ENST00000596378	EIF2S3L	Q2VIR3	472 aa	Known RBP	18.82	■□□□□ 0.6
SRRM1-222	ENST00000596378		Q8TCH9	128 aa		18.82	■□□□□ 0.6
SRRM1-222	ENST00000596378	UNKL	Q9H9P5	680 aa	Known RBP	18.82	■□□□□ 0.6
SRRM1-222	ENST00000596378	JPT1	Q9UK76	154 aa		18.82	■□□□□ 0.6
SRRM1-222	ENST00000596378	CUL9	Q8IWT3	2517 aa		18.81	■□□□□ 0.6
SRRM1-222	ENST00000596378	HMGB3	O15347	200 aa	Known RBP	18.81	■□□□□ 0.6
SRRM1-222	ENST00000596378	RAB5B	P61020	215 aa		18.81	■□□□□ 0.6
SRRM1-222	ENST00000596378	TFF3	Q07654	80 aa		18.81	■□□□□ 0.6
SRRM1-222	ENST00000596378	ACSM6	Q6P461	480 aa		18.81	■□□□□ 0.6
SRRM1-222	ENST00000596378	C1orf229	Q6ZS94	237 aa	Predicted RBP	18.81	■□□□□ 0.6
SRRM1-222	ENST00000596378	TGIF2LY	Q8IUE0	185 aa		18.81	■□□□□ 0.6
SRRM1-222	ENST00000596378	PPP1R35	Q8TAP8	253 aa		18.81	■□□□□ 0.6
SRRM1-222	ENST00000596378	MBD3L1	Q8WWY6	194 aa		18.81	■□□□□ 0.6
SRRM1-222	ENST00000596378	ACACA	Q13085	2346 aa		18.81	■□□□□ 0.6
SRRM1-222	ENST00000596378	ADGRG4	Q8IZF6	3080 aa		18.8	■□□□□ 0.6
SRRM1-222	ENST00000596378		A8MXE2	369 aa		18.8	■□□□□ 0.6
SRRM1-222	ENST00000596378	CYB5R3	P00387	301 aa	Predicted RBP	18.8	■□□□□ 0.6
SRRM1-222	ENST00000596378	BCL2	P10415	239 aa		18.8	■□□□□ 0.6
SRRM1-222	ENST00000596378	RAB5A	P20339	215 aa		18.8	■□□□□ 0.6
SRRM1-222	ENST00000596378	RAB11A	P62491	216 aa		18.8	■□□□□ 0.6
SRRM1-222	ENST00000596378	DLK1	P80370	383 aa		18.8	■□□□□ 0.6
SRRM1-222	ENST00000596378	TCTEX1D1	Q8N7M0	179 aa		18.8	■□□□□ 0.6

Retrieved 100 of 20,778 RNA–protein pairs in 46 ms