RNA–Protein interactions for RNA: ENST00000596136.5

USE1-207, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 1 (best) BASIC

Gene USE1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-207ENST00000596136 OR2D2Q9H210 308 aa10.2□□□□□ -0.78
USE1-207ENST00000596136 FBXL15Q9H469 300 aa10.2□□□□□ -0.78
USE1-207ENST00000596136 VCX3AQ9NNX9 186 aa10.2□□□□□ -0.78
USE1-207ENST00000596136 SPATA2Q9UM82 520 aa10.2□□□□□ -0.78
USE1-207ENST00000596136 NUBP2Q9Y5Y2 271 aa10.2□□□□□ -0.78
USE1-207ENST00000596136 TRAV41A0A0B4J266 112 aa10.19□□□□□ -0.78
USE1-207ENST00000596136 G3V318 75 aa10.19□□□□□ -0.78
USE1-207ENST00000596136 APOA2P02652 100 aa10.19□□□□□ -0.78
USE1-207ENST00000596136 EGR2P11161 476 aaPredicted RBP10.19□□□□□ -0.78
USE1-207ENST00000596136 NDPQ00604 133 aa10.19□□□□□ -0.78
USE1-207ENST00000596136 IDNKQ5T6J7 187 aa10.19□□□□□ -0.78
USE1-207ENST00000596136 FOXB2Q5VYV0 432 aa10.19□□□□□ -0.78
USE1-207ENST00000596136 CNIH2Q6PI25 160 aa10.19□□□□□ -0.78
USE1-207ENST00000596136 ZNF562Q6V9R5 426 aa10.19□□□□□ -0.78
USE1-207ENST00000596136 LCNL1Q6ZST4 164 aa10.19□□□□□ -0.78
USE1-207ENST00000596136 CROCCP3Q8IVE0 287 aa10.19□□□□□ -0.78
USE1-207ENST00000596136 NUDCD2Q8WVJ2 157 aa10.19□□□□□ -0.78
USE1-207ENST00000596136 RAX2Q96IS3 184 aa10.19□□□□□ -0.78
USE1-207ENST00000596136 TSNAXQ99598 290 aaKnown RBP10.19□□□□□ -0.78
USE1-207ENST00000596136 GINS4Q9BRT9 223 aa10.19□□□□□ -0.78
USE1-207ENST00000596136 ST6GALNAC5Q9BVH7 336 aa10.19□□□□□ -0.78
USE1-207ENST00000596136 NECAP2Q9NVZ3 263 aa10.19□□□□□ -0.78
USE1-207ENST00000596136 FBXO7Q9Y3I1 522 aa10.19□□□□□ -0.78
USE1-207ENST00000596136 WSB1Q9Y6I7 421 aa10.19□□□□□ -0.78
USE1-207ENST00000596136 TNCP24821 2201 aa10.19□□□□□ -0.78
USE1-207ENST00000596136 NUDT19A8MXV4 375 aa10.18□□□□□ -0.78
USE1-207ENST00000596136 AIREO43918 545 aa10.18□□□□□ -0.78
USE1-207ENST00000596136 IGLV2-23P01705 113 aa10.18□□□□□ -0.78
USE1-207ENST00000596136 HLA-DQB1P01920 261 aa10.18□□□□□ -0.78
USE1-207ENST00000596136 CRYGBP07316 175 aa10.18□□□□□ -0.78
USE1-207ENST00000596136 TGFBR1P36897 503 aa10.18□□□□□ -0.78
USE1-207ENST00000596136 RPS19P39019 145 aaKnown RBP10.18□□□□□ -0.78
USE1-207ENST00000596136 LGALS7P47929 136 aa10.18□□□□□ -0.78
USE1-207ENST00000596136 GNG2P59768 71 aa10.18□□□□□ -0.78
USE1-207ENST00000596136 RPS16P62249 146 aaKnown RBP10.18□□□□□ -0.78
USE1-207ENST00000596136 RUNX1Q01196 453 aa10.18□□□□□ -0.78
USE1-207ENST00000596136 TMEM177Q53S58 311 aa10.18□□□□□ -0.78
USE1-207ENST00000596136 TCTEX1D1Q8N7M0 179 aa10.18□□□□□ -0.78
USE1-207ENST00000596136 C4orf3Q8WVX3 66 aa10.18□□□□□ -0.78
USE1-207ENST00000596136 DDB2Q92466 427 aa10.18□□□□□ -0.78
USE1-207ENST00000596136 FLYWCH2Q96CP2 140 aaKnown RBP10.18□□□□□ -0.78
USE1-207ENST00000596136 UBE2E2Q96LR5 201 aa10.18□□□□□ -0.78
USE1-207ENST00000596136 KLK15Q9H2R5 256 aa10.18□□□□□ -0.78
USE1-207ENST00000596136 PARP11Q9NR21 331 aa10.18□□□□□ -0.78
USE1-207ENST00000596136 SLC35D1Q9NTN3 355 aa10.18□□□□□ -0.78
USE1-207ENST00000596136 ANXA10Q9UJ72 324 aa10.18□□□□□ -0.78
USE1-207ENST00000596136 TRAV18A0A075B6X5 111 aa10.17□□□□□ -0.78
USE1-207ENST00000596136 CCL24O00175 119 aa10.17□□□□□ -0.78
USE1-207ENST00000596136 TUSC2O75896 110 aa10.17□□□□□ -0.78
USE1-207ENST00000596136 RRASP10301 218 aa10.17□□□□□ -0.78
USE1-207ENST00000596136 DUTP33316 252 aaKnown RBP10.17□□□□□ -0.78
USE1-207ENST00000596136 EGFEM1PQ0D2K5 195 aa10.17□□□□□ -0.78
USE1-207ENST00000596136 FHL3Q13643 280 aa10.17□□□□□ -0.78
USE1-207ENST00000596136 AKIRIN2Q53H80 203 aa10.17□□□□□ -0.78
USE1-207ENST00000596136 ZNF491Q8N8L2 437 aa10.17□□□□□ -0.78
USE1-207ENST00000596136 ADTRPQ96IZ2 230 aa10.17□□□□□ -0.78
USE1-207ENST00000596136 AUNIPQ9H7T9 357 aa10.17□□□□□ -0.78
USE1-207ENST00000596136 DIABLOQ9NR28 239 aa10.17□□□□□ -0.78
USE1-207ENST00000596136 METTL1Q9UBP6 276 aaKnown RBP10.17□□□□□ -0.78
USE1-207ENST00000596136 OR2W1Q9Y3N9 320 aa10.17□□□□□ -0.78
USE1-207ENST00000596136 LINC00473A8K010 186 aa10.16□□□□□ -0.78
USE1-207ENST00000596136 I3L521 148 aa10.16□□□□□ -0.78
USE1-207ENST00000596136 SOX15O60248 233 aa10.16□□□□□ -0.78
USE1-207ENST00000596136 SLC22A5O76082 557 aa10.16□□□□□ -0.78
USE1-207ENST00000596136 IGLV2-14P01704 120 aa10.16□□□□□ -0.78
USE1-207ENST00000596136 PRB2P02812 416 aaPredicted RBP10.16□□□□□ -0.78
USE1-207ENST00000596136 RAB9AP51151 201 aa10.16□□□□□ -0.78
USE1-207ENST00000596136 LUMP51884 338 aaPredicted RBP10.16□□□□□ -0.78
USE1-207ENST00000596136 SSBP2P81877 361 aaPredicted RBP10.16□□□□□ -0.78
USE1-207ENST00000596136 TMEM267Q0VDI3 215 aaPredicted RBP10.16□□□□□ -0.78
USE1-207ENST00000596136 PLGLAQ15195 96 aa10.16□□□□□ -0.78
USE1-207ENST00000596136 PPP1R27Q86WC6 154 aa10.16□□□□□ -0.78
USE1-207ENST00000596136 HOGA1Q86XE5 327 aa10.16□□□□□ -0.78
USE1-207ENST00000596136 ZNF645Q8N7E2 425 aa10.16□□□□□ -0.78
USE1-207ENST00000596136 MCRIP2Q9BUT9 160 aaKnown RBP10.16□□□□□ -0.78
USE1-207ENST00000596136 GPR61Q9BZJ8 451 aa10.16□□□□□ -0.78
USE1-207ENST00000596136 AURKAIP1Q9NWT8 199 aaPredicted RBP10.16□□□□□ -0.78
USE1-207ENST00000596136 VSIG4Q9Y279 399 aa10.16□□□□□ -0.78
USE1-207ENST00000596136 RBM7Q9Y580 266 aaKnown RBP10.16□□□□□ -0.78
USE1-207ENST00000596136 SRRM4A7MD48 611 aaKnown RBP10.15□□□□□ -0.78
USE1-207ENST00000596136 XRCC3O43542 346 aa10.15□□□□□ -0.78
USE1-207ENST00000596136 SLC25A17O43808 307 aa10.15□□□□□ -0.78
USE1-207ENST00000596136 CA2P00918 260 aa10.15□□□□□ -0.78
USE1-207ENST00000596136 NFYAP23511 347 aaPredicted RBP10.15□□□□□ -0.78
USE1-207ENST00000596136 EIF4EBP1Q13541 118 aaPredicted RBP10.15□□□□□ -0.78
USE1-207ENST00000596136 RTL8BQ17RB0 113 aa10.15□□□□□ -0.78
USE1-207ENST00000596136 MRGPRG-AS1Q2M3A8 158 aa10.15□□□□□ -0.78
USE1-207ENST00000596136 TMEM65Q6PI78 240 aa10.15□□□□□ -0.78
USE1-207ENST00000596136 BVESQ8NE79 360 aa10.15□□□□□ -0.78
USE1-207ENST00000596136 BEST4Q8NFU0 473 aa10.15□□□□□ -0.78
USE1-207ENST00000596136 OR13F1Q8NGS4 319 aa10.15□□□□□ -0.78
USE1-207ENST00000596136 SLC25A46Q96AG3 418 aa10.15□□□□□ -0.78
USE1-207ENST00000596136 KCTD12Q96CX2 325 aaKnown RBP10.15□□□□□ -0.78
USE1-207ENST00000596136 DUX3Q96PT4 197 aa10.15□□□□□ -0.78
USE1-207ENST00000596136 FUNDC2Q9BWH2 189 aa10.15□□□□□ -0.78
USE1-207ENST00000596136 TPSG1Q9NRR2 321 aa10.15□□□□□ -0.78
USE1-207ENST00000596136 FOXA2Q9Y261 457 aaPredicted RBP10.15□□□□□ -0.78
USE1-207ENST00000596136 IGKV1D-13A0A0B4J2D9 117 aa10.14□□□□□ -0.79
USE1-207ENST00000596136 ARPC1BO15143 372 aaKnown RBP10.14□□□□□ -0.79
USE1-207ENST00000596136 IGKV1-13P0DP09 117 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms