RNA–Protein interactions for RNA: ENST00000595659.5

CCDC9-202, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 356 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-202ENST00000595659 GSTT2P0CG29 244 aa13.14□□□□□ -0.31
CCDC9-202ENST00000595659 GSTT2BP0CG30 244 aa13.14□□□□□ -0.31
CCDC9-202ENST00000595659 SPNP16150 400 aa13.14□□□□□ -0.31
CCDC9-202ENST00000595659 GNB3P16520 340 aa13.14□□□□□ -0.31
CCDC9-202ENST00000595659 FXYD3Q14802 87 aa13.14□□□□□ -0.31
CCDC9-202ENST00000595659 AKIRIN2Q53H80 203 aa13.14□□□□□ -0.31
CCDC9-202ENST00000595659 OVCH2Q7RTZ1 564 aa13.14□□□□□ -0.31
CCDC9-202ENST00000595659 TCTEX1D1Q8N7M0 179 aa13.14□□□□□ -0.31
CCDC9-202ENST00000595659 OR5T1Q8NG75 326 aa13.14□□□□□ -0.31
CCDC9-202ENST00000595659 ZNF355PQ9NSJ1 428 aa13.14□□□□□ -0.31
CCDC9-202ENST00000595659 SLC35D1Q9NTN3 355 aa13.14□□□□□ -0.31
CCDC9-202ENST00000595659 ZNF230Q9UIE0 474 aaPredicted RBP13.14□□□□□ -0.31
CCDC9-202ENST00000595659 RAB22AQ9UL26 194 aa13.14□□□□□ -0.31
CCDC9-202ENST00000595659 SMAD5-AS1Q9Y6J3 95 aa13.14□□□□□ -0.31
CCDC9-202ENST00000595659 RYR3Q15413 4870 aa13.13□□□□□ -0.31
CCDC9-202ENST00000595659 A0A0B4J203 849 aa13.13□□□□□ -0.31
CCDC9-202ENST00000595659 SHISA3A0PJX4 238 aa13.13□□□□□ -0.31
CCDC9-202ENST00000595659 FABP7O15540 132 aa13.13□□□□□ -0.31
CCDC9-202ENST00000595659 APOA2P02652 100 aa13.13□□□□□ -0.31
CCDC9-202ENST00000595659 TRGV3P03979 118 aa13.13□□□□□ -0.31
CCDC9-202ENST00000595659 MRPS15P82914 257 aaKnown RBP13.13□□□□□ -0.31
CCDC9-202ENST00000595659 PJVKQ0ZLH3 352 aa13.13□□□□□ -0.31
CCDC9-202ENST00000595659 SSX1Q16384 188 aa13.13□□□□□ -0.31
CCDC9-202ENST00000595659 HAPLN4Q86UW8 402 aa13.13□□□□□ -0.31
CCDC9-202ENST00000595659 PDPNQ86YL7 162 aa13.13□□□□□ -0.31
CCDC9-202ENST00000595659 FLYWCH2Q96CP2 140 aaKnown RBP13.13□□□□□ -0.31
CCDC9-202ENST00000595659 RAB3CQ96E17 227 aa13.13□□□□□ -0.31
CCDC9-202ENST00000595659 CNBD2Q96M20 576 aa13.13□□□□□ -0.31
CCDC9-202ENST00000595659 ACOT13Q9NPJ3 140 aa13.13□□□□□ -0.31
CCDC9-202ENST00000595659 HSPB1P04792 205 aaKnown RBP13.12□□□□□ -0.31
CCDC9-202ENST00000595659 FCGR3AP08637 254 aa13.12□□□□□ -0.31
CCDC9-202ENST00000595659 CD40LGP29965 261 aa13.12□□□□□ -0.31
CCDC9-202ENST00000595659 PYHIN1Q6K0P9 492 aa13.12□□□□□ -0.31
CCDC9-202ENST00000595659 OR4A4PQ8NGN8 299 aa13.12□□□□□ -0.31
CCDC9-202ENST00000595659 C5orf30Q96GV9 206 aa13.12□□□□□ -0.31
CCDC9-202ENST00000595659 RHOVQ96L33 236 aa13.12□□□□□ -0.31
CCDC9-202ENST00000595659 OR2D2Q9H210 308 aa13.12□□□□□ -0.31
CCDC9-202ENST00000595659 SDHAF2Q9NX18 166 aa13.12□□□□□ -0.31
CCDC9-202ENST00000595659 HUWE1Q7Z6Z7 4374 aaKnown RBP13.11□□□□□ -0.31
CCDC9-202ENST00000595659 SPDEFO95238 335 aa13.11□□□□□ -0.31
CCDC9-202ENST00000595659 CNIH1O95406 144 aa13.11□□□□□ -0.31
CCDC9-202ENST00000595659 IGLV2-23P01705 113 aa13.11□□□□□ -0.31
CCDC9-202ENST00000595659 PSMD7P51665 324 aa13.11□□□□□ -0.31
CCDC9-202ENST00000595659 SSBP2P81877 361 aaPredicted RBP13.11□□□□□ -0.31
CCDC9-202ENST00000595659 DEFA5Q01523 94 aa13.11□□□□□ -0.31
CCDC9-202ENST00000595659 ACSM6Q6P461 480 aa13.11□□□□□ -0.31
CCDC9-202ENST00000595659 IZUMO2Q6UXV1 221 aa13.11□□□□□ -0.31
CCDC9-202ENST00000595659 SBSPONQ8IVN8 264 aa13.11□□□□□ -0.31
CCDC9-202ENST00000595659 OR10R2Q8NGX6 335 aa13.11□□□□□ -0.31
CCDC9-202ENST00000595659 OR10J5Q8NHC4 309 aa13.11□□□□□ -0.31
CCDC9-202ENST00000595659 SMIM30A4D0T7 59 aa13.1□□□□□ -0.31
CCDC9-202ENST00000595659 ANKRD34BA5PLL1 514 aa13.1□□□□□ -0.31
CCDC9-202ENST00000595659 TRIM64CA6NLI5 447 aa13.1□□□□□ -0.31
CCDC9-202ENST00000595659 APELAP0DMC3 54 aa13.1□□□□□ -0.31
CCDC9-202ENST00000595659 GP9P14770 177 aa13.1□□□□□ -0.31
CCDC9-202ENST00000595659 SERPINB10P48595 397 aa13.1□□□□□ -0.31
CCDC9-202ENST00000595659 PITPNAQ00169 270 aa13.1□□□□□ -0.31
CCDC9-202ENST00000595659 ZNF367Q7RTV3 350 aa13.1□□□□□ -0.31
CCDC9-202ENST00000595659 BVESQ8NE79 360 aa13.1□□□□□ -0.31
CCDC9-202ENST00000595659 OR4C12Q96R67 309 aa13.1□□□□□ -0.31
CCDC9-202ENST00000595659 SLA2Q9H6Q3 261 aa13.1□□□□□ -0.31
CCDC9-202ENST00000595659 ELF5Q9UKW6 265 aaPredicted RBP13.1□□□□□ -0.31
CCDC9-202ENST00000595659 RBM7Q9Y580 266 aaKnown RBP13.1□□□□□ -0.31
CCDC9-202ENST00000595659 TRBV6-7A0A0A0MS04 114 aa13.09□□□□□ -0.31
CCDC9-202ENST00000595659 IFITM5A6NNB3 132 aa13.09□□□□□ -0.31
CCDC9-202ENST00000595659 J3QRK9 145 aa13.09□□□□□ -0.31
CCDC9-202ENST00000595659 RAB27BO00194 218 aa13.09□□□□□ -0.31
CCDC9-202ENST00000595659 MFNGO00587 321 aa13.09□□□□□ -0.31
CCDC9-202ENST00000595659 PDCD5O14737 125 aa13.09□□□□□ -0.31
CCDC9-202ENST00000595659 CRYGBP07316 175 aa13.09□□□□□ -0.31
CCDC9-202ENST00000595659 TBCEQ15813 527 aaPredicted RBP13.09□□□□□ -0.31
CCDC9-202ENST00000595659 SRSF7Q16629 238 aaKnown RBP eCLIP13.09□□□□□ -0.31
CCDC9-202ENST00000595659 POC5Q8NA72 575 aa13.09□□□□□ -0.31
CCDC9-202ENST00000595659 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.09□□□□□ -0.31
CCDC9-202ENST00000595659 OR6Q1Q8NGQ2 317 aa13.09□□□□□ -0.31
CCDC9-202ENST00000595659 CABLES2Q9BTV7 478 aa13.09□□□□□ -0.31
CCDC9-202ENST00000595659 RSRP1Q9BUV0 290 aa13.09□□□□□ -0.31
CCDC9-202ENST00000595659 TENM3Q9P273 2699 aa13.09□□□□□ -0.31
CCDC9-202ENST00000595659 IGKV1D-8A0A087WSZ0 117 aa13.08□□□□□ -0.32
CCDC9-202ENST00000595659 TRAV1-2A0A0B4J238 106 aa13.08□□□□□ -0.32
CCDC9-202ENST00000595659 C13orf42A0A1B0GVH6 325 aa13.08□□□□□ -0.32
CCDC9-202ENST00000595659 SRRM4A7MD48 611 aaKnown RBP13.08□□□□□ -0.32
CCDC9-202ENST00000595659 SHOXO15266 292 aa13.08□□□□□ -0.32
CCDC9-202ENST00000595659 FRMD6-AS1P0C7T7 363 aa13.08□□□□□ -0.32
CCDC9-202ENST00000595659 HIST1H1DP16402 221 aaKnown RBP13.08□□□□□ -0.32
CCDC9-202ENST00000595659 GADD45AP24522 165 aa13.08□□□□□ -0.32
CCDC9-202ENST00000595659 MYL9P24844 172 aa13.08□□□□□ -0.32
CCDC9-202ENST00000595659 ARFRP1Q13795 201 aa13.08□□□□□ -0.32
CCDC9-202ENST00000595659 C22orf42Q6IC83 251 aa13.08□□□□□ -0.32
CCDC9-202ENST00000595659 HARBI1Q96MB7 349 aa13.08□□□□□ -0.32
CCDC9-202ENST00000595659 GINS4Q9BRT9 223 aa13.08□□□□□ -0.32
CCDC9-202ENST00000595659 RAB3BP20337 219 aa13.07□□□□□ -0.32
CCDC9-202ENST00000595659 TALDO1P37837 337 aa13.07□□□□□ -0.32
CCDC9-202ENST00000595659 RANBP1P43487 201 aa13.07□□□□□ -0.32
CCDC9-202ENST00000595659 LGALS7P47929 136 aa13.07□□□□□ -0.32
CCDC9-202ENST00000595659 NR2C2APQ86WQ0 139 aa13.07□□□□□ -0.32
CCDC9-202ENST00000595659 ATG5Q9H1Y0 275 aa13.07□□□□□ -0.32
CCDC9-202ENST00000595659 VCX3BQ9H321 246 aa13.07□□□□□ -0.32
CCDC9-202ENST00000595659 NDUFB11Q9NX14 153 aa13.07□□□□□ -0.32
CCDC9-202ENST00000595659 TRDV1A0A1B0GX56 115 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms