RNA–Protein interactions for RNA: ENST00000593700.5

CAPN12-202, Transcript of calpain 12, humanhuman

TSL 1 (best)

Gene CAPN12, Length 1,118 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN12-202ENST00000593700 GATA3P23771 443 aa11.97□□□□□ -0.49
CAPN12-202ENST00000593700 ZFP36P26651 326 aaKnown RBP11.97□□□□□ -0.49
CAPN12-202ENST00000593700 LOXL1Q08397 574 aaPredicted RBP11.97□□□□□ -0.49
CAPN12-202ENST00000593700 HLA-DRB5Q30154 266 aa11.97□□□□□ -0.49
CAPN12-202ENST00000593700 FAM53AQ6NSI3 398 aaPredicted RBP11.97□□□□□ -0.49
CAPN12-202ENST00000593700 GSG1LQ6UXU4 331 aa11.97□□□□□ -0.49
CAPN12-202ENST00000593700 C11orf42Q8N5U0 333 aa11.97□□□□□ -0.49
CAPN12-202ENST00000593700 LRTM2Q8N967 370 aa11.97□□□□□ -0.49
CAPN12-202ENST00000593700 OR5M8Q8NGP6 311 aa11.97□□□□□ -0.49
CAPN12-202ENST00000593700 RNASE11Q8TAA1 199 aaKnown RBP11.97□□□□□ -0.49
CAPN12-202ENST00000593700 TP53RKQ96S44 253 aa11.97□□□□□ -0.49
CAPN12-202ENST00000593700 SPIN2AQ99865 258 aa11.97□□□□□ -0.49
CAPN12-202ENST00000593700 SPIN2BQ9BPZ2 258 aa11.97□□□□□ -0.49
CAPN12-202ENST00000593700 UNKLQ9H9P5 680 aaKnown RBP11.97□□□□□ -0.49
CAPN12-202ENST00000593700 TRAV20A0A0B4J274 112 aa11.96□□□□□ -0.49
CAPN12-202ENST00000593700 A0A1W2PPE3 182 aa11.96□□□□□ -0.49
CAPN12-202ENST00000593700 APOA2P02652 100 aa11.96□□□□□ -0.49
CAPN12-202ENST00000593700 COX7A1P24310 79 aa11.96□□□□□ -0.49
CAPN12-202ENST00000593700 CEACAM3P40198 252 aa11.96□□□□□ -0.49
CAPN12-202ENST00000593700 ZNF134P52741 427 aa11.96□□□□□ -0.49
CAPN12-202ENST00000593700 ZNF137PP52743 207 aa11.96□□□□□ -0.49
CAPN12-202ENST00000593700 CD83Q01151 205 aa11.96□□□□□ -0.49
CAPN12-202ENST00000593700 TMEM268Q5VZI3 342 aa11.96□□□□□ -0.49
CAPN12-202ENST00000593700 REC114Q7Z4M0 266 aa11.96□□□□□ -0.49
CAPN12-202ENST00000593700 VMO1Q7Z5L0 202 aa11.96□□□□□ -0.49
CAPN12-202ENST00000593700 OR11H7Q8NGC8 314 aa11.96□□□□□ -0.49
CAPN12-202ENST00000593700 RBPMSQ93062 196 aaKnown RBP11.96□□□□□ -0.49
CAPN12-202ENST00000593700 C18orf12Q96KH6 178 aa11.96□□□□□ -0.49
CAPN12-202ENST00000593700 MDFIQ99750 246 aa11.96□□□□□ -0.49
CAPN12-202ENST00000593700 ZNF436Q9C0F3 470 aaPredicted RBP11.96□□□□□ -0.49
CAPN12-202ENST00000593700 SIRT7Q9NRC8 400 aa11.96□□□□□ -0.49
CAPN12-202ENST00000593700 TMED3Q9Y3Q3 217 aa11.96□□□□□ -0.49
CAPN12-202ENST00000593700 INSIG2Q9Y5U4 225 aa11.96□□□□□ -0.49
CAPN12-202ENST00000593700 ACANP16112 2415 aa11.96□□□□□ -0.5
CAPN12-202ENST00000593700 ABCA2Q9BZC7 2435 aa11.96□□□□□ -0.5
CAPN12-202ENST00000593700 C5orf51A6NDU8 294 aa11.95□□□□□ -0.5
CAPN12-202ENST00000593700 DBX1A6NMT0 343 aa11.95□□□□□ -0.5
CAPN12-202ENST00000593700 ARG1P05089 322 aa11.95□□□□□ -0.5
CAPN12-202ENST00000593700 GIPP09681 153 aaPredicted RBP11.95□□□□□ -0.5
CAPN12-202ENST00000593700 RRASP10301 218 aa11.95□□□□□ -0.5
CAPN12-202ENST00000593700 DUTP33316 252 aaKnown RBP11.95□□□□□ -0.5
CAPN12-202ENST00000593700 AKR1C2P52895 323 aa11.95□□□□□ -0.5
CAPN12-202ENST00000593700 CYCSP99999 105 aaKnown RBP11.95□□□□□ -0.5
CAPN12-202ENST00000593700 PAX2Q02962 417 aa11.95□□□□□ -0.5
CAPN12-202ENST00000593700 RTL8BQ17RB0 113 aa11.95□□□□□ -0.5
CAPN12-202ENST00000593700 ANKRD55Q3KP44 614 aa11.95□□□□□ -0.5
CAPN12-202ENST00000593700 SP6Q3SY56 376 aa11.95□□□□□ -0.5
CAPN12-202ENST00000593700 RPL39P5Q59GN2 51 aa11.95□□□□□ -0.5
CAPN12-202ENST00000593700 DCAF12L2Q5VW00 463 aa11.95□□□□□ -0.5
CAPN12-202ENST00000593700 ZNF833PQ6ZTB9 187 aa11.95□□□□□ -0.5
CAPN12-202ENST00000593700 PNKDQ8N490 385 aa11.95□□□□□ -0.5
CAPN12-202ENST00000593700 Q8N7P7 452 aa11.95□□□□□ -0.5
CAPN12-202ENST00000593700 LINC01356Q8N9X3 169 aa11.95□□□□□ -0.5
CAPN12-202ENST00000593700 OR4S2Q8NH73 311 aa11.95□□□□□ -0.5
CAPN12-202ENST00000593700 GLYATL2Q8WU03 294 aa11.95□□□□□ -0.5
CAPN12-202ENST00000593700 MSI2Q96DH6 328 aaKnown RBP11.95□□□□□ -0.5
CAPN12-202ENST00000593700 TMEM56Q96MV1 263 aa11.95□□□□□ -0.5
CAPN12-202ENST00000593700 REG4Q9BYZ8 158 aa11.95□□□□□ -0.5
CAPN12-202ENST00000593700 SIRPDQ9H106 197 aa11.95□□□□□ -0.5
CAPN12-202ENST00000593700 LPAR2Q9HBW0 351 aa11.95□□□□□ -0.5
CAPN12-202ENST00000593700 TMEM56-RWDD3S4R434 201 aa11.95□□□□□ -0.5
CAPN12-202ENST00000593700 HIVEP1P15822 2718 aa11.95□□□□□ -0.5
CAPN12-202ENST00000593700 FAM25EA8MYX2 175 aa11.94□□□□□ -0.5
CAPN12-202ENST00000593700 SMAD7O15105 426 aaKnown RBP11.94□□□□□ -0.5
CAPN12-202ENST00000593700 RBFOX2O43251 390 aaKnown RBP eCLIP11.94□□□□□ -0.5
CAPN12-202ENST00000593700 CDS2O95674 445 aa11.94□□□□□ -0.5
CAPN12-202ENST00000593700 HLA-GP17693 338 aa11.94□□□□□ -0.5
CAPN12-202ENST00000593700 RAB13P51153 203 aa11.94□□□□□ -0.5
CAPN12-202ENST00000593700 ARHGDIBP52566 201 aa11.94□□□□□ -0.5
CAPN12-202ENST00000593700 LGALS4P56470 323 aa11.94□□□□□ -0.5
CAPN12-202ENST00000593700 RAP2BP61225 183 aa11.94□□□□□ -0.5
CAPN12-202ENST00000593700 EIF4EBP1Q13541 118 aaPredicted RBP11.94□□□□□ -0.5
CAPN12-202ENST00000593700 THOC7Q6I9Y2 204 aaKnown RBP11.94□□□□□ -0.5
CAPN12-202ENST00000593700 DHRS7BQ6IAN0 325 aaPredicted RBP11.94□□□□□ -0.5
CAPN12-202ENST00000593700 TGIF2LXQ8IUE1 241 aa11.94□□□□□ -0.5
CAPN12-202ENST00000593700 ODF3L1Q8IXM7 274 aa11.94□□□□□ -0.5
CAPN12-202ENST00000593700 TCTE3Q8IZS6 198 aa11.94□□□□□ -0.5
CAPN12-202ENST00000593700 SPAG16Q8N0X2 631 aa11.94□□□□□ -0.5
CAPN12-202ENST00000593700 OR11H6Q8NGC7 330 aa11.94□□□□□ -0.5
CAPN12-202ENST00000593700 RPEQ96AT9 228 aa11.94□□□□□ -0.5
CAPN12-202ENST00000593700 C5orf30Q96GV9 206 aa11.94□□□□□ -0.5
CAPN12-202ENST00000593700 C1orf159Q96HA4 380 aa11.94□□□□□ -0.5
CAPN12-202ENST00000593700 NEURL2Q9BR09 285 aa11.94□□□□□ -0.5
CAPN12-202ENST00000593700 PCGF1Q9BSM1 259 aa11.94□□□□□ -0.5
CAPN12-202ENST00000593700 COMMD9Q9P000 198 aa11.94□□□□□ -0.5
CAPN12-202ENST00000593700 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.93□□□□□ -0.5
CAPN12-202ENST00000593700 LEUTXA8MZ59 168 aa11.93□□□□□ -0.5
CAPN12-202ENST00000593700 IGLV1-47P01700 117 aa11.93□□□□□ -0.5
CAPN12-202ENST00000593700 HNRNPCP07910 306 aaKnown RBP eCLIP11.93□□□□□ -0.5
CAPN12-202ENST00000593700 HOXB5P09067 269 aa11.93□□□□□ -0.5
CAPN12-202ENST00000593700 HOXB4P17483 251 aaPredicted RBP11.93□□□□□ -0.5
CAPN12-202ENST00000593700 VDAC1P21796 283 aa11.93□□□□□ -0.5
CAPN12-202ENST00000593700 HTR1DP28221 377 aa11.93□□□□□ -0.5
CAPN12-202ENST00000593700 GZMKP49863 264 aa11.93□□□□□ -0.5
CAPN12-202ENST00000593700 ERVK-16P61578 105 aa11.93□□□□□ -0.5
CAPN12-202ENST00000593700 SLC35G3Q8N808 338 aa11.93□□□□□ -0.5
CAPN12-202ENST00000593700 RRNAD1Q96FB5 475 aaKnown RBP11.93□□□□□ -0.5
CAPN12-202ENST00000593700 GPHA2Q96T91 129 aa11.93□□□□□ -0.5
CAPN12-202ENST00000593700 RANGRFQ9HD47 186 aaPredicted RBP11.93□□□□□ -0.5
CAPN12-202ENST00000593700 MMP26Q9NRE1 261 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms