RNA–Protein interactions for RNA: ENST00000590096.1

ATG4D-212, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 1,282 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-212ENST00000590096 CBX3Q13185 183 aa16.93■□□□□ 0.3
ATG4D-212ENST00000590096 DYRK1AQ13627 763 aa16.93■□□□□ 0.3
ATG4D-212ENST00000590096 PDPNQ86YL7 162 aa16.93■□□□□ 0.3
ATG4D-212ENST00000590096 Q8N9W7 124 aa16.93■□□□□ 0.3
ATG4D-212ENST00000590096 C5orf30Q96GV9 206 aa16.93■□□□□ 0.3
ATG4D-212ENST00000590096 PLSCR3Q9NRY6 295 aa16.93■□□□□ 0.3
ATG4D-212ENST00000590096 SLC35D1Q9NTN3 355 aa16.93■□□□□ 0.3
ATG4D-212ENST00000590096 SERTAD4Q9NUC0 356 aa16.93■□□□□ 0.3
ATG4D-212ENST00000590096 LIN7CQ9NUP9 197 aaKnown RBP16.93■□□□□ 0.3
ATG4D-212ENST00000590096 KIAA1456Q9P272 454 aa16.93■□□□□ 0.3
ATG4D-212ENST00000590096 A3GALT2U3KPV4 340 aa16.93■□□□□ 0.3
ATG4D-212ENST00000590096 NBR2O15453 112 aa16.92■□□□□ 0.3
ATG4D-212ENST00000590096 LINC00205P59089 165 aa16.92■□□□□ 0.3
ATG4D-212ENST00000590096 FXYD4P59646 89 aa16.92■□□□□ 0.3
ATG4D-212ENST00000590096 TMEM95Q3KNT9 176 aa16.92■□□□□ 0.3
ATG4D-212ENST00000590096 LYSMD2Q8IV50 215 aa16.92■□□□□ 0.3
ATG4D-212ENST00000590096 KLHDC1Q8N7A1 406 aa16.92■□□□□ 0.3
ATG4D-212ENST00000590096 SECTM1Q8WVN6 248 aa16.92■□□□□ 0.3
ATG4D-212ENST00000590096 KLK11Q9UBX7 282 aa16.92■□□□□ 0.3
ATG4D-212ENST00000590096 MTFP1Q9UDX5 166 aa16.92■□□□□ 0.3
ATG4D-212ENST00000590096 RBMX2Q9Y388 322 aaKnown RBP16.92■□□□□ 0.3
ATG4D-212ENST00000590096 GABARAPH6UMI1 98 aa16.91■□□□□ 0.3
ATG4D-212ENST00000590096 TNFSF8P32971 234 aa16.91■□□□□ 0.3
ATG4D-212ENST00000590096 DUTP33316 252 aaKnown RBP16.91■□□□□ 0.3
ATG4D-212ENST00000590096 RTL8BQ17RB0 113 aa16.91■□□□□ 0.3
ATG4D-212ENST00000590096 ACTBL2Q562R1 376 aa16.91■□□□□ 0.3
ATG4D-212ENST00000590096 FAM71E2Q8N5Q1 922 aa16.91■□□□□ 0.3
ATG4D-212ENST00000590096 RITA1Q96K30 269 aa16.91■□□□□ 0.3
ATG4D-212ENST00000590096 RNF5Q99942 180 aa16.91■□□□□ 0.3
ATG4D-212ENST00000590096 ZNF2Q9BSG1 426 aaPredicted RBP16.91■□□□□ 0.3
ATG4D-212ENST00000590096 SLC5A7Q9GZV3 580 aa16.91■□□□□ 0.3
ATG4D-212ENST00000590096 FABP12A6NFH5 140 aa16.9■□□□□ 0.3
ATG4D-212ENST00000590096 RRASP10301 218 aa16.9■□□□□ 0.3
ATG4D-212ENST00000590096 CNTFRP26992 372 aa16.9■□□□□ 0.3
ATG4D-212ENST00000590096 TSPAN5P62079 268 aa16.9■□□□□ 0.3
ATG4D-212ENST00000590096 RPS16P62249 146 aaKnown RBP16.9■□□□□ 0.3
ATG4D-212ENST00000590096 DGCR2P98153 550 aa16.9■□□□□ 0.3
ATG4D-212ENST00000590096 DHRS11Q6UWP2 260 aa16.9■□□□□ 0.3
ATG4D-212ENST00000590096 NPBQ8NG41 125 aa16.9■□□□□ 0.3
ATG4D-212ENST00000590096 OR6F1Q8NGZ6 308 aa16.9■□□□□ 0.3
ATG4D-212ENST00000590096 FLYWCH2Q96CP2 140 aaKnown RBP16.9■□□□□ 0.3
ATG4D-212ENST00000590096 CTDSPLO15194 276 aa16.89■□□□□ 0.29
ATG4D-212ENST00000590096 IGKV1-16P04430 117 aa16.89■□□□□ 0.29
ATG4D-212ENST00000590096 SSBP1Q04837 148 aaKnown RBP16.89■□□□□ 0.29
ATG4D-212ENST00000590096 SRSF4Q08170 494 aaKnown RBP16.89■□□□□ 0.29
ATG4D-212ENST00000590096 MSMO1Q15800 293 aa16.89■□□□□ 0.29
ATG4D-212ENST00000590096 KCTD9Q7L273 389 aa16.89■□□□□ 0.29
ATG4D-212ENST00000590096 SLC35E3Q7Z769 313 aa16.89■□□□□ 0.29
ATG4D-212ENST00000590096 TMEM17Q86X19 198 aa16.89■□□□□ 0.29
ATG4D-212ENST00000590096 SMIM4Q8WVI0 70 aa16.89■□□□□ 0.29
ATG4D-212ENST00000590096 TSNAXQ99598 290 aaKnown RBP16.89■□□□□ 0.29
ATG4D-212ENST00000590096 HSD17B10Q99714 261 aaKnown RBP16.89■□□□□ 0.29
ATG4D-212ENST00000590096 CCL28Q9NRJ3 127 aa16.89■□□□□ 0.29
ATG4D-212ENST00000590096 PRELID3BQ9Y3B1 194 aa16.89■□□□□ 0.29
ATG4D-212ENST00000590096 LINC00473A8K010 186 aa16.88■□□□□ 0.29
ATG4D-212ENST00000590096 KCNAB3O43448 404 aa16.88■□□□□ 0.29
ATG4D-212ENST00000590096 NDUFA3O95167 84 aa16.88■□□□□ 0.29
ATG4D-212ENST00000590096 IGLV2-14P01704 120 aa16.88■□□□□ 0.29
ATG4D-212ENST00000590096 IGHG2P01859 326 aa16.88■□□□□ 0.29
ATG4D-212ENST00000590096 KRTAP10-3P60369 221 aa16.88■□□□□ 0.29
ATG4D-212ENST00000590096 PLGLAQ15195 96 aa16.88■□□□□ 0.29
ATG4D-212ENST00000590096 C5orf64Q2M2E5 130 aa16.88■□□□□ 0.29
ATG4D-212ENST00000590096 ZNF660Q6AZW8 331 aaPredicted RBP16.88■□□□□ 0.29
ATG4D-212ENST00000590096 FOXRED2Q8IWF2 684 aa16.88■□□□□ 0.29
ATG4D-212ENST00000590096 ZBTB34Q8NCN2 500 aa16.88■□□□□ 0.29
ATG4D-212ENST00000590096 BVESQ8NE79 360 aa16.88■□□□□ 0.29
ATG4D-212ENST00000590096 BORCS5Q969J3 196 aa16.88■□□□□ 0.29
ATG4D-212ENST00000590096 MOB3AQ96BX8 217 aa16.88■□□□□ 0.29
ATG4D-212ENST00000590096 CITED1Q99966 193 aa16.88■□□□□ 0.29
ATG4D-212ENST00000590096 WNT10AQ9GZT5 417 aa16.88■□□□□ 0.29
ATG4D-212ENST00000590096 RRHO14718 337 aa16.87■□□□□ 0.29
ATG4D-212ENST00000590096 IFNA6P05013 189 aa16.87■□□□□ 0.29
ATG4D-212ENST00000590096 TBPP20226 339 aa16.87■□□□□ 0.29
ATG4D-212ENST00000590096 TAS2R19P59542 299 aa16.87■□□□□ 0.29
ATG4D-212ENST00000590096 RNASE10Q5GAN6 216 aaKnown RBP16.87■□□□□ 0.29
ATG4D-212ENST00000590096 VAX1Q5SQQ9 334 aa16.87■□□□□ 0.29
ATG4D-212ENST00000590096 FOXB2Q5VYV0 432 aa16.87■□□□□ 0.29
ATG4D-212ENST00000590096 CENPVQ7Z7K6 275 aaPredicted RBP16.87■□□□□ 0.29
ATG4D-212ENST00000590096 DDB2Q92466 427 aa16.87■□□□□ 0.29
ATG4D-212ENST00000590096 TAS2R8Q9NYW2 309 aa16.87■□□□□ 0.29
ATG4D-212ENST00000590096 ZNF107Q9UII5 783 aaPredicted RBP16.87■□□□□ 0.29
ATG4D-212ENST00000590096 M0QYG6 137 aa16.86■□□□□ 0.29
ATG4D-212ENST00000590096 SHOXO15266 292 aa16.86■□□□□ 0.29
ATG4D-212ENST00000590096 SPDEFO95238 335 aa16.86■□□□□ 0.29
ATG4D-212ENST00000590096 CD3DP04234 171 aa16.86■□□□□ 0.29
ATG4D-212ENST00000590096 ZNF66Q6ZN08 573 aa16.86■□□□□ 0.29
ATG4D-212ENST00000590096 TMEM229BQ8NBD8 167 aa16.86■□□□□ 0.29
ATG4D-212ENST00000590096 TCTEX1D2Q8WW35 142 aa16.86■□□□□ 0.29
ATG4D-212ENST00000590096 HARBI1Q96MB7 349 aa16.86■□□□□ 0.29
ATG4D-212ENST00000590096 FBXL15Q9H469 300 aa16.86■□□□□ 0.29
ATG4D-212ENST00000590096 FCGR3BO75015 233 aa16.85■□□□□ 0.29
ATG4D-212ENST00000590096 CRYZL1O95825 349 aa16.85■□□□□ 0.29
ATG4D-212ENST00000590096 HLA-DRB1P01911 266 aa16.85■□□□□ 0.29
ATG4D-212ENST00000590096 CSF1P09603 554 aa16.85■□□□□ 0.29
ATG4D-212ENST00000590096 LGALS7P47929 136 aa16.85■□□□□ 0.29
ATG4D-212ENST00000590096 PSG5Q15238 335 aa16.85■□□□□ 0.29
ATG4D-212ENST00000590096 TMEM177Q53S58 311 aa16.85■□□□□ 0.29
ATG4D-212ENST00000590096 LIN54Q6MZP7 749 aa16.85■□□□□ 0.29
ATG4D-212ENST00000590096 ZNF818PQ6ZRF7 136 aa16.85■□□□□ 0.29
ATG4D-212ENST00000590096 MFSD4AQ8N468 514 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms