RNA–Protein interactions for RNA: ENST00000587945.1

VMP1-206, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-206ENST00000587945 OR8U9P0C7N5 309 aa11.06□□□□□ -0.64
VMP1-206ENST00000587945 SPNP16150 400 aa11.06□□□□□ -0.64
VMP1-206ENST00000587945 TPPP2P59282 170 aa11.06□□□□□ -0.64
VMP1-206ENST00000587945 SSX1Q16384 188 aa11.06□□□□□ -0.64
VMP1-206ENST00000587945 AKIRIN2Q53H80 203 aa11.06□□□□□ -0.64
VMP1-206ENST00000587945 IGSF11Q5DX21 431 aa11.06□□□□□ -0.64
VMP1-206ENST00000587945 GRPEL2Q8TAA5 225 aa11.06□□□□□ -0.64
VMP1-206ENST00000587945 MAFIPQ8WZ33 124 aa11.06□□□□□ -0.64
VMP1-206ENST00000587945 SLC35D1Q9NTN3 355 aa11.06□□□□□ -0.64
VMP1-206ENST00000587945 RAB22AQ9UL26 194 aa11.06□□□□□ -0.64
VMP1-206ENST00000587945 SMAD5-AS1Q9Y6J3 95 aa11.06□□□□□ -0.64
VMP1-206ENST00000587945 A0A075B6Q4 140 aa11.05□□□□□ -0.64
VMP1-206ENST00000587945 A0A0B4J203 849 aa11.05□□□□□ -0.64
VMP1-206ENST00000587945 SPDEFO95238 335 aa11.05□□□□□ -0.64
VMP1-206ENST00000587945 APOA2P02652 100 aa11.05□□□□□ -0.64
VMP1-206ENST00000587945 FCGR3AP08637 254 aa11.05□□□□□ -0.64
VMP1-206ENST00000587945 GSTT2P0CG29 244 aa11.05□□□□□ -0.64
VMP1-206ENST00000587945 GSTT2BP0CG30 244 aa11.05□□□□□ -0.64
VMP1-206ENST00000587945 GNB3P16520 340 aa11.05□□□□□ -0.64
VMP1-206ENST00000587945 PJVKQ0ZLH3 352 aa11.05□□□□□ -0.64
VMP1-206ENST00000587945 FXYD3Q14802 87 aa11.05□□□□□ -0.64
VMP1-206ENST00000587945 PYHIN1Q6K0P9 492 aa11.05□□□□□ -0.64
VMP1-206ENST00000587945 PDPNQ86YL7 162 aa11.05□□□□□ -0.64
VMP1-206ENST00000587945 OR4A4PQ8NGN8 299 aa11.05□□□□□ -0.64
VMP1-206ENST00000587945 FLYWCH2Q96CP2 140 aaKnown RBP11.05□□□□□ -0.64
VMP1-206ENST00000587945 RAB3CQ96E17 227 aa11.05□□□□□ -0.64
VMP1-206ENST00000587945 C5orf30Q96GV9 206 aa11.05□□□□□ -0.64
VMP1-206ENST00000587945 RHOVQ96L33 236 aa11.05□□□□□ -0.64
VMP1-206ENST00000587945 CNBD2Q96M20 576 aa11.05□□□□□ -0.64
VMP1-206ENST00000587945 ACOT13Q9NPJ3 140 aa11.05□□□□□ -0.64
VMP1-206ENST00000587945 ZNF230Q9UIE0 474 aaPredicted RBP11.05□□□□□ -0.64
VMP1-206ENST00000587945 IGLV2-23P01705 113 aa11.04□□□□□ -0.64
VMP1-206ENST00000587945 TRGV3P03979 118 aa11.04□□□□□ -0.64
VMP1-206ENST00000587945 HSPB1P04792 205 aaKnown RBP11.04□□□□□ -0.64
VMP1-206ENST00000587945 PSMD7P51665 324 aa11.04□□□□□ -0.64
VMP1-206ENST00000587945 SSBP2P81877 361 aaPredicted RBP11.04□□□□□ -0.64
VMP1-206ENST00000587945 MRPS15P82914 257 aaKnown RBP11.04□□□□□ -0.64
VMP1-206ENST00000587945 ACSM6Q6P461 480 aa11.04□□□□□ -0.64
VMP1-206ENST00000587945 OVCH2Q7RTZ1 564 aa11.04□□□□□ -0.64
VMP1-206ENST00000587945 HAPLN4Q86UW8 402 aa11.04□□□□□ -0.64
VMP1-206ENST00000587945 OR5T1Q8NG75 326 aa11.04□□□□□ -0.64
VMP1-206ENST00000587945 OR2D2Q9H210 308 aa11.04□□□□□ -0.64
VMP1-206ENST00000587945 ZNF355PQ9NSJ1 428 aa11.04□□□□□ -0.64
VMP1-206ENST00000587945 SDHAF2Q9NX18 166 aa11.04□□□□□ -0.64
VMP1-206ENST00000587945 CNIH1O95406 144 aa11.03□□□□□ -0.64
VMP1-206ENST00000587945 CRYGBP07316 175 aa11.03□□□□□ -0.64
VMP1-206ENST00000587945 GP9P14770 177 aa11.03□□□□□ -0.64
VMP1-206ENST00000587945 CD40LGP29965 261 aa11.03□□□□□ -0.64
VMP1-206ENST00000587945 SERPINB10P48595 397 aa11.03□□□□□ -0.64
VMP1-206ENST00000587945 TBCEQ15813 527 aaPredicted RBP11.03□□□□□ -0.64
VMP1-206ENST00000587945 IZUMO2Q6UXV1 221 aa11.03□□□□□ -0.64
VMP1-206ENST00000587945 ZNF367Q7RTV3 350 aa11.03□□□□□ -0.64
VMP1-206ENST00000587945 SBSPONQ8IVN8 264 aa11.03□□□□□ -0.64
VMP1-206ENST00000587945 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.03□□□□□ -0.64
VMP1-206ENST00000587945 OR10R2Q8NGX6 335 aa11.03□□□□□ -0.64
VMP1-206ENST00000587945 OR10J5Q8NHC4 309 aa11.03□□□□□ -0.64
VMP1-206ENST00000587945 CABLES2Q9BTV7 478 aa11.03□□□□□ -0.64
VMP1-206ENST00000587945 TRBV6-7A0A0A0MS04 114 aa11.02□□□□□ -0.65
VMP1-206ENST00000587945 TRAV1-2A0A0B4J238 106 aa11.02□□□□□ -0.65
VMP1-206ENST00000587945 SMIM30A4D0T7 59 aa11.02□□□□□ -0.65
VMP1-206ENST00000587945 TRIM64CA6NLI5 447 aa11.02□□□□□ -0.65
VMP1-206ENST00000587945 IFITM5A6NNB3 132 aa11.02□□□□□ -0.65
VMP1-206ENST00000587945 SRRM4A7MD48 611 aaKnown RBP11.02□□□□□ -0.65
VMP1-206ENST00000587945 RAB27BO00194 218 aa11.02□□□□□ -0.65
VMP1-206ENST00000587945 MFNGO00587 321 aa11.02□□□□□ -0.65
VMP1-206ENST00000587945 PDCD5O14737 125 aa11.02□□□□□ -0.65
VMP1-206ENST00000587945 HIST1H1DP16402 221 aaKnown RBP11.02□□□□□ -0.65
VMP1-206ENST00000587945 PITPNAQ00169 270 aa11.02□□□□□ -0.65
VMP1-206ENST00000587945 DEFA5Q01523 94 aa11.02□□□□□ -0.65
VMP1-206ENST00000587945 POC5Q8NA72 575 aa11.02□□□□□ -0.65
VMP1-206ENST00000587945 BVESQ8NE79 360 aa11.02□□□□□ -0.65
VMP1-206ENST00000587945 SLA2Q9H6Q3 261 aa11.02□□□□□ -0.65
VMP1-206ENST00000587945 ELF5Q9UKW6 265 aaPredicted RBP11.02□□□□□ -0.65
VMP1-206ENST00000587945 IGKV1D-8A0A087WSZ0 117 aa11.01□□□□□ -0.65
VMP1-206ENST00000587945 ANKRD34BA5PLL1 514 aa11.01□□□□□ -0.65
VMP1-206ENST00000587945 APELAP0DMC3 54 aa11.01□□□□□ -0.65
VMP1-206ENST00000587945 GADD45AP24522 165 aa11.01□□□□□ -0.65
VMP1-206ENST00000587945 MYL9P24844 172 aa11.01□□□□□ -0.65
VMP1-206ENST00000587945 RANBP1P43487 201 aa11.01□□□□□ -0.65
VMP1-206ENST00000587945 LGALS7P47929 136 aa11.01□□□□□ -0.65
VMP1-206ENST00000587945 NR2C2APQ86WQ0 139 aa11.01□□□□□ -0.65
VMP1-206ENST00000587945 OR6Q1Q8NGQ2 317 aa11.01□□□□□ -0.65
VMP1-206ENST00000587945 HARBI1Q96MB7 349 aa11.01□□□□□ -0.65
VMP1-206ENST00000587945 OR4C12Q96R67 309 aa11.01□□□□□ -0.65
VMP1-206ENST00000587945 NDUFB11Q9NX14 153 aa11.01□□□□□ -0.65
VMP1-206ENST00000587945 RBM7Q9Y580 266 aaKnown RBP11.01□□□□□ -0.65
VMP1-206ENST00000587945 C13orf42A0A1B0GVH6 325 aa11□□□□□ -0.65
VMP1-206ENST00000587945 TRDV1A0A1B0GX56 115 aa11□□□□□ -0.65
VMP1-206ENST00000587945 J3QRK9 145 aa11□□□□□ -0.65
VMP1-206ENST00000587945 SHOXO15266 292 aa11□□□□□ -0.65
VMP1-206ENST00000587945 FRMD6-AS1P0C7T7 363 aa11□□□□□ -0.65
VMP1-206ENST00000587945 RAB3BP20337 219 aa11□□□□□ -0.65
VMP1-206ENST00000587945 RAB6AP20340 208 aa11□□□□□ -0.65
VMP1-206ENST00000587945 ARFRP1Q13795 201 aa11□□□□□ -0.65
VMP1-206ENST00000587945 SRSF7Q16629 238 aaKnown RBP eCLIP11□□□□□ -0.65
VMP1-206ENST00000587945 C22orf42Q6IC83 251 aa11□□□□□ -0.65
VMP1-206ENST00000587945 GINS4Q9BRT9 223 aa11□□□□□ -0.65
VMP1-206ENST00000587945 RSRP1Q9BUV0 290 aa11□□□□□ -0.65
VMP1-206ENST00000587945 VCX3BQ9H321 246 aa11□□□□□ -0.65
VMP1-206ENST00000587945 RANGRFQ9HD47 186 aaPredicted RBP11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms