RNA–Protein interactions for RNA: ENST00000578630.1

ERBB2-208, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 2

Gene ERBB2, Length 874 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-208ENST00000578630 RPS16P62249 146 aaKnown RBP9.18□□□□□ -0.94
ERBB2-208ENST00000578630 MMDQ15546 238 aa9.18□□□□□ -0.94
ERBB2-208ENST00000578630 MSMO1Q15800 293 aa9.18□□□□□ -0.94
ERBB2-208ENST00000578630 RTL8BQ17RB0 113 aa9.18□□□□□ -0.94
ERBB2-208ENST00000578630 RNASE12Q5GAN4 147 aaKnown RBP9.18□□□□□ -0.94
ERBB2-208ENST00000578630 LPCAT3Q6P1A2 487 aa9.18□□□□□ -0.94
ERBB2-208ENST00000578630 SHISA2Q6UWI4 295 aa9.18□□□□□ -0.94
ERBB2-208ENST00000578630 FAM131AQ6UXB0 335 aa9.18□□□□□ -0.94
ERBB2-208ENST00000578630 PDPNQ86YL7 162 aa9.18□□□□□ -0.94
ERBB2-208ENST00000578630 C5orf56Q8N8D9 126 aa9.18□□□□□ -0.94
ERBB2-208ENST00000578630 ZNF383Q8NA42 475 aa9.18□□□□□ -0.94
ERBB2-208ENST00000578630 SECTM1Q8WVN6 248 aa9.18□□□□□ -0.94
ERBB2-208ENST00000578630 HSD17B10Q99714 261 aaKnown RBP9.18□□□□□ -0.94
ERBB2-208ENST00000578630 ZNF2Q9BSG1 426 aaPredicted RBP9.18□□□□□ -0.94
ERBB2-208ENST00000578630 SLC5A7Q9GZV3 580 aa9.18□□□□□ -0.94
ERBB2-208ENST00000578630 ZNF702PQ9H963 129 aa9.18□□□□□ -0.94
ERBB2-208ENST00000578630 PLSCR3Q9NRY6 295 aa9.18□□□□□ -0.94
ERBB2-208ENST00000578630 SLC35D1Q9NTN3 355 aa9.18□□□□□ -0.94
ERBB2-208ENST00000578630 LIN7CQ9NUP9 197 aaKnown RBP9.18□□□□□ -0.94
ERBB2-208ENST00000578630 TAS2R8Q9NYW2 309 aa9.18□□□□□ -0.94
ERBB2-208ENST00000578630 ZNF107Q9UII5 783 aaPredicted RBP9.18□□□□□ -0.94
ERBB2-208ENST00000578630 RBMX2Q9Y388 322 aaKnown RBP9.18□□□□□ -0.94
ERBB2-208ENST00000578630 PRELID3BQ9Y3B1 194 aa9.18□□□□□ -0.94
ERBB2-208ENST00000578630 IGKV1D-13A0A0B4J2D9 117 aa9.17□□□□□ -0.94
ERBB2-208ENST00000578630 AMY1AP04745 511 aa9.17□□□□□ -0.94
ERBB2-208ENST00000578630 AMY2AP04746 511 aa9.17□□□□□ -0.94
ERBB2-208ENST00000578630 IGKV1-13P0DP09 117 aa9.17□□□□□ -0.94
ERBB2-208ENST00000578630 PTBP1P26599 531 aaKnown RBP eCLIP9.17□□□□□ -0.94
ERBB2-208ENST00000578630 DUTP33316 252 aaKnown RBP9.17□□□□□ -0.94
ERBB2-208ENST00000578630 LGALS7P47929 136 aa9.17□□□□□ -0.94
ERBB2-208ENST00000578630 TAS2R19P59542 299 aa9.17□□□□□ -0.94
ERBB2-208ENST00000578630 FXYD4P59646 89 aa9.17□□□□□ -0.94
ERBB2-208ENST00000578630 FBLN7Q53RD9 439 aa9.17□□□□□ -0.94
ERBB2-208ENST00000578630 RNASE10Q5GAN6 216 aaKnown RBP9.17□□□□□ -0.94
ERBB2-208ENST00000578630 VAX1Q5SQQ9 334 aa9.17□□□□□ -0.94
ERBB2-208ENST00000578630 LIN54Q6MZP7 749 aa9.17□□□□□ -0.94
ERBB2-208ENST00000578630 ZNF66Q6ZN08 573 aa9.17□□□□□ -0.94
ERBB2-208ENST00000578630 CENPVQ7Z7K6 275 aaPredicted RBP9.17□□□□□ -0.94
ERBB2-208ENST00000578630 Q8N9W7 124 aa9.17□□□□□ -0.94
ERBB2-208ENST00000578630 TMEM229BQ8NBD8 167 aa9.17□□□□□ -0.94
ERBB2-208ENST00000578630 NPBQ8NG41 125 aa9.17□□□□□ -0.94
ERBB2-208ENST00000578630 TSNAXQ99598 290 aaKnown RBP9.17□□□□□ -0.94
ERBB2-208ENST00000578630 SOSTQ9BQB4 213 aa9.17□□□□□ -0.94
ERBB2-208ENST00000578630 CCL28Q9NRJ3 127 aa9.17□□□□□ -0.94
ERBB2-208ENST00000578630 SIGLEC9Q9Y336 463 aa9.17□□□□□ -0.94
ERBB2-208ENST00000578630 NBR2O15453 112 aa9.16□□□□□ -0.94
ERBB2-208ENST00000578630 KCNAB3O43448 404 aa9.16□□□□□ -0.94
ERBB2-208ENST00000578630 GSTZ1O43708 216 aaPredicted RBP9.16□□□□□ -0.94
ERBB2-208ENST00000578630 VSIG10L2P0DP72 767 aa9.16□□□□□ -0.94
ERBB2-208ENST00000578630 S100GP29377 79 aa9.16□□□□□ -0.94
ERBB2-208ENST00000578630 LINC00205P59089 165 aa9.16□□□□□ -0.94
ERBB2-208ENST00000578630 DGCR2P98153 550 aa9.16□□□□□ -0.94
ERBB2-208ENST00000578630 PLGLAQ15195 96 aa9.16□□□□□ -0.94
ERBB2-208ENST00000578630 PYDC2Q56P42 97 aa9.16□□□□□ -0.94
ERBB2-208ENST00000578630 SPANXN2Q5MJ10 180 aa9.16□□□□□ -0.94
ERBB2-208ENST00000578630 Q6ZS46 218 aa9.16□□□□□ -0.94
ERBB2-208ENST00000578630 SLC35E3Q7Z769 313 aa9.16□□□□□ -0.94
ERBB2-208ENST00000578630 FOXRED2Q8IWF2 684 aa9.16□□□□□ -0.94
ERBB2-208ENST00000578630 CMTM1Q8IZ96 169 aa9.16□□□□□ -0.94
ERBB2-208ENST00000578630 MFSD4AQ8N468 514 aa9.16□□□□□ -0.94
ERBB2-208ENST00000578630 BVESQ8NE79 360 aa9.16□□□□□ -0.94
ERBB2-208ENST00000578630 SMIM4Q8WVI0 70 aa9.16□□□□□ -0.94
ERBB2-208ENST00000578630 MOB3AQ96BX8 217 aa9.16□□□□□ -0.94
ERBB2-208ENST00000578630 RITA1Q96K30 269 aa9.16□□□□□ -0.94
ERBB2-208ENST00000578630 BATF3Q9NR55 127 aa9.16□□□□□ -0.94
ERBB2-208ENST00000578630 SERTAD4Q9NUC0 356 aa9.16□□□□□ -0.94
ERBB2-208ENST00000578630 SH2D7A6NKC9 451 aaPredicted RBP9.15□□□□□ -0.94
ERBB2-208ENST00000578630 RRHO14718 337 aa9.15□□□□□ -0.94
ERBB2-208ENST00000578630 SHOXO15266 292 aa9.15□□□□□ -0.94
ERBB2-208ENST00000578630 RAB3DO95716 219 aa9.15□□□□□ -0.94
ERBB2-208ENST00000578630 IGLV2-14P01704 120 aa9.15□□□□□ -0.94
ERBB2-208ENST00000578630 IGHG2P01859 326 aa9.15□□□□□ -0.94
ERBB2-208ENST00000578630 CD3DP04234 171 aa9.15□□□□□ -0.94
ERBB2-208ENST00000578630 CSF1P09603 554 aa9.15□□□□□ -0.94
ERBB2-208ENST00000578630 KIR2DS2P43631 304 aa9.15□□□□□ -0.94
ERBB2-208ENST00000578630 CATR1Q13166 79 aa9.15□□□□□ -0.94
ERBB2-208ENST00000578630 MEF2DQ14814 521 aa9.15□□□□□ -0.94
ERBB2-208ENST00000578630 C5orf64Q2M2E5 130 aa9.15□□□□□ -0.94
ERBB2-208ENST00000578630 ZNF660Q6AZW8 331 aaPredicted RBP9.15□□□□□ -0.94
ERBB2-208ENST00000578630 STEAP1BQ6NZ63 245 aa9.15□□□□□ -0.94
ERBB2-208ENST00000578630 KCTD9Q7L273 389 aa9.15□□□□□ -0.94
ERBB2-208ENST00000578630 ARRDC1Q8N5I2 433 aa9.15□□□□□ -0.94
ERBB2-208ENST00000578630 FAM71E2Q8N5Q1 922 aa9.15□□□□□ -0.94
ERBB2-208ENST00000578630 POC5Q8NA72 575 aa9.15□□□□□ -0.94
ERBB2-208ENST00000578630 OR6Q1Q8NGQ2 317 aa9.15□□□□□ -0.94
ERBB2-208ENST00000578630 WFDC12Q8WWY7 111 aa9.15□□□□□ -0.94
ERBB2-208ENST00000578630 THAP7Q9BT49 309 aaPredicted RBP9.15□□□□□ -0.94
ERBB2-208ENST00000578630 GON7Q9BXV9 100 aa9.15□□□□□ -0.94
ERBB2-208ENST00000578630 A6NHS1 94 aa9.14□□□□□ -0.95
ERBB2-208ENST00000578630 LINC00473A8K010 186 aa9.14□□□□□ -0.95
ERBB2-208ENST00000578630 DISC1C4P0D8 188 aa9.14□□□□□ -0.95
ERBB2-208ENST00000578630 M0QYG6 137 aa9.14□□□□□ -0.95
ERBB2-208ENST00000578630 AP4M1O00189 453 aa9.14□□□□□ -0.95
ERBB2-208ENST00000578630 FCGR3BO75015 233 aa9.14□□□□□ -0.95
ERBB2-208ENST00000578630 NDUFA3O95167 84 aa9.14□□□□□ -0.95
ERBB2-208ENST00000578630 SPDEFO95238 335 aa9.14□□□□□ -0.95
ERBB2-208ENST00000578630 CD74P04233 296 aa9.14□□□□□ -0.95
ERBB2-208ENST00000578630 IGKV1-16P04430 117 aa9.14□□□□□ -0.95
ERBB2-208ENST00000578630 AKAIN1P0CW23 69 aa9.14□□□□□ -0.95
ERBB2-208ENST00000578630 GNRHRP30968 328 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms