RNA–Protein interactions for RNA: ENST00000561026.5

SNX1-213, Transcript of sorting nexin 1, humanhuman

TSL 1 (best) BASIC

Gene SNX1, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-213ENST00000561026 FLYWCH2Q96CP2 140 aaKnown RBP12.51□□□□□ -0.41
SNX1-213ENST00000561026 RAB22AQ9UL26 194 aa12.51□□□□□ -0.41
SNX1-213ENST00000561026 TMEM272A0A1B0GTI8 110 aa12.5□□□□□ -0.41
SNX1-213ENST00000561026 M0R1X1 148 aa12.5□□□□□ -0.41
SNX1-213ENST00000561026 IGHV3-11P01762 117 aa12.5□□□□□ -0.41
SNX1-213ENST00000561026 APOA2P02652 100 aa12.5□□□□□ -0.41
SNX1-213ENST00000561026 SPNP16150 400 aa12.5□□□□□ -0.41
SNX1-213ENST00000561026 TPPP2P59282 170 aa12.5□□□□□ -0.41
SNX1-213ENST00000561026 FXYD3Q14802 87 aa12.5□□□□□ -0.41
SNX1-213ENST00000561026 ACSM6Q6P461 480 aa12.5□□□□□ -0.41
SNX1-213ENST00000561026 ARPC1AQ92747 370 aa12.5□□□□□ -0.41
SNX1-213ENST00000561026 RAB3CQ96E17 227 aa12.5□□□□□ -0.41
SNX1-213ENST00000561026 RHOVQ96L33 236 aa12.5□□□□□ -0.41
SNX1-213ENST00000561026 SLA2Q9H6Q3 261 aa12.5□□□□□ -0.41
SNX1-213ENST00000561026 FABP7O15540 132 aa12.49□□□□□ -0.41
SNX1-213ENST00000561026 SLC25A17O43808 307 aa12.49□□□□□ -0.41
SNX1-213ENST00000561026 CD3GP09693 182 aa12.49□□□□□ -0.41
SNX1-213ENST00000561026 MRPS15P82914 257 aaKnown RBP12.49□□□□□ -0.41
SNX1-213ENST00000561026 HES5Q5TA89 166 aa12.49□□□□□ -0.41
SNX1-213ENST00000561026 ARPC1BO15143 372 aaKnown RBP12.48□□□□□ -0.41
SNX1-213ENST00000561026 BET1O15155 118 aa12.48□□□□□ -0.41
SNX1-213ENST00000561026 TRGV3P03979 118 aa12.48□□□□□ -0.41
SNX1-213ENST00000561026 FCGR3AP08637 254 aa12.48□□□□□ -0.41
SNX1-213ENST00000561026 OR8U9P0C7N5 309 aa12.48□□□□□ -0.41
SNX1-213ENST00000561026 LGALS7P47929 136 aa12.48□□□□□ -0.41
SNX1-213ENST00000561026 SSX1Q16384 188 aa12.48□□□□□ -0.41
SNX1-213ENST00000561026 MOGAT2Q3SYC2 334 aa12.48□□□□□ -0.41
SNX1-213ENST00000561026 IGSF11Q5DX21 431 aa12.48□□□□□ -0.41
SNX1-213ENST00000561026 OR6Q1Q8NGQ2 317 aa12.48□□□□□ -0.41
SNX1-213ENST00000561026 OR10J5Q8NHC4 309 aa12.48□□□□□ -0.41
SNX1-213ENST00000561026 GRPEL2Q8TAA5 225 aa12.48□□□□□ -0.41
SNX1-213ENST00000561026 SLC35D1Q9NTN3 355 aa12.48□□□□□ -0.41
SNX1-213ENST00000561026 TRBV6-7A0A0A0MS04 114 aa12.47□□□□□ -0.41
SNX1-213ENST00000561026 TRAV1-2A0A0B4J238 106 aa12.47□□□□□ -0.41
SNX1-213ENST00000561026 IFITM5A6NNB3 132 aa12.47□□□□□ -0.41
SNX1-213ENST00000561026 PDCD5O14737 125 aa12.47□□□□□ -0.41
SNX1-213ENST00000561026 DIRAS3O95661 229 aa12.47□□□□□ -0.41
SNX1-213ENST00000561026 IGLV2-23P01705 113 aa12.47□□□□□ -0.41
SNX1-213ENST00000561026 GSTT2P0CG29 244 aa12.47□□□□□ -0.41
SNX1-213ENST00000561026 GSTT2BP0CG30 244 aa12.47□□□□□ -0.41
SNX1-213ENST00000561026 GP9P14770 177 aa12.47□□□□□ -0.41
SNX1-213ENST00000561026 OR10A3P58181 314 aa12.47□□□□□ -0.41
SNX1-213ENST00000561026 SSBP2P81877 361 aaPredicted RBP12.47□□□□□ -0.41
SNX1-213ENST00000561026 PITPNAQ00169 270 aa12.47□□□□□ -0.41
SNX1-213ENST00000561026 TBCEQ15813 527 aaPredicted RBP12.47□□□□□ -0.41
SNX1-213ENST00000561026 SBSPONQ8IVN8 264 aa12.47□□□□□ -0.41
SNX1-213ENST00000561026 OR10R2Q8NGX6 335 aa12.47□□□□□ -0.41
SNX1-213ENST00000561026 OR4C12Q96R67 309 aa12.47□□□□□ -0.41
SNX1-213ENST00000561026 CABLES2Q9BTV7 478 aa12.47□□□□□ -0.41
SNX1-213ENST00000561026 OR2D2Q9H210 308 aa12.47□□□□□ -0.41
SNX1-213ENST00000561026 ZNF355PQ9NSJ1 428 aa12.47□□□□□ -0.41
SNX1-213ENST00000561026 SDHAF2Q9NX18 166 aa12.47□□□□□ -0.41
SNX1-213ENST00000561026 SHISA3A0PJX4 238 aa12.46□□□□□ -0.41
SNX1-213ENST00000561026 H3BUA1 57 aa12.46□□□□□ -0.41
SNX1-213ENST00000561026 RAB27BO00194 218 aa12.46□□□□□ -0.41
SNX1-213ENST00000561026 MFNGO00587 321 aa12.46□□□□□ -0.41
SNX1-213ENST00000561026 CNIH1O95406 144 aa12.46□□□□□ -0.41
SNX1-213ENST00000561026 CRYGBP07316 175 aa12.46□□□□□ -0.41
SNX1-213ENST00000561026 GNB3P16520 340 aa12.46□□□□□ -0.41
SNX1-213ENST00000561026 PJVKQ0ZLH3 352 aa12.46□□□□□ -0.41
SNX1-213ENST00000561026 ZNF367Q7RTV3 350 aa12.46□□□□□ -0.41
SNX1-213ENST00000561026 POC5Q8NA72 575 aa12.46□□□□□ -0.41
SNX1-213ENST00000561026 OR5T1Q8NG75 326 aa12.46□□□□□ -0.41
SNX1-213ENST00000561026 ERICH4A6NGS2 130 aa12.45□□□□□ -0.42
SNX1-213ENST00000561026 HIST1H1DP16402 221 aaKnown RBP12.45□□□□□ -0.42
SNX1-213ENST00000561026 RAB6AP20340 208 aa12.45□□□□□ -0.42
SNX1-213ENST00000561026 GADD45AP24522 165 aa12.45□□□□□ -0.42
SNX1-213ENST00000561026 TAGLNQ01995 201 aaKnown RBP12.45□□□□□ -0.42
SNX1-213ENST00000561026 TMEM68Q96MH6 324 aa12.45□□□□□ -0.42
SNX1-213ENST00000561026 VCX3BQ9H321 246 aa12.45□□□□□ -0.42
SNX1-213ENST00000561026 RANGRFQ9HD47 186 aaPredicted RBP12.45□□□□□ -0.42
SNX1-213ENST00000561026 NDUFB11Q9NX14 153 aa12.45□□□□□ -0.42
SNX1-213ENST00000561026 ZNF230Q9UIE0 474 aaPredicted RBP12.45□□□□□ -0.42
SNX1-213ENST00000561026 A0A075B6Q4 140 aa12.44□□□□□ -0.42
SNX1-213ENST00000561026 A0A0G2JLM5 398 aa12.44□□□□□ -0.42
SNX1-213ENST00000561026 C13orf42A0A1B0GVH6 325 aa12.44□□□□□ -0.42
SNX1-213ENST00000561026 SRRM4A7MD48 611 aaKnown RBP12.44□□□□□ -0.42
SNX1-213ENST00000561026 FRMD6-AS1P0C7T7 363 aa12.44□□□□□ -0.42
SNX1-213ENST00000561026 HSPA13P48723 471 aa12.44□□□□□ -0.42
SNX1-213ENST00000561026 TMEM177Q53S58 311 aa12.44□□□□□ -0.42
SNX1-213ENST00000561026 IZUMO2Q6UXV1 221 aa12.44□□□□□ -0.42
SNX1-213ENST00000561026 OVCH2Q7RTZ1 564 aa12.44□□□□□ -0.42
SNX1-213ENST00000561026 MAFIPQ8WZ33 124 aa12.44□□□□□ -0.42
SNX1-213ENST00000561026 C5orf30Q96GV9 206 aa12.44□□□□□ -0.42
SNX1-213ENST00000561026 CNBD2Q96M20 576 aa12.44□□□□□ -0.42
SNX1-213ENST00000561026 HARBI1Q96MB7 349 aa12.44□□□□□ -0.42
SNX1-213ENST00000561026 ELOVL1Q9BW60 279 aa12.44□□□□□ -0.42
SNX1-213ENST00000561026 BLOC1S6Q9UL45 172 aa12.44□□□□□ -0.42
SNX1-213ENST00000561026 TRDV1A0A1B0GX56 115 aa12.43□□□□□ -0.42
SNX1-213ENST00000561026 METTL21EPA6NDL7 271 aa12.43□□□□□ -0.42
SNX1-213ENST00000561026 TRIM64CA6NLI5 447 aa12.43□□□□□ -0.42
SNX1-213ENST00000561026 C3orf84H3BNL1 204 aa12.43□□□□□ -0.42
SNX1-213ENST00000561026 SHOXO15266 292 aa12.43□□□□□ -0.42
SNX1-213ENST00000561026 BRI3O95415 125 aa12.43□□□□□ -0.42
SNX1-213ENST00000561026 RAB3BP20337 219 aa12.43□□□□□ -0.42
SNX1-213ENST00000561026 ZP3P21754 424 aa12.43□□□□□ -0.42
SNX1-213ENST00000561026 MYL9P24844 172 aa12.43□□□□□ -0.42
SNX1-213ENST00000561026 CBX3Q13185 183 aa12.43□□□□□ -0.42
SNX1-213ENST00000561026 SRSF7Q16629 238 aaKnown RBP eCLIP12.43□□□□□ -0.42
SNX1-213ENST00000561026 RTL8BQ17RB0 113 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms