RNA–Protein interactions for RNA: ENST00000560316.1

HERC1-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-207ENST00000560316 EI24O14681 340 aa12.4□□□□□ -0.42
HERC1-207ENST00000560316 ITGB1BP1O14713 200 aa12.4□□□□□ -0.42
HERC1-207ENST00000560316 OGG1O15527 345 aa12.4□□□□□ -0.42
HERC1-207ENST00000560316 NDUFB8O95169 186 aa12.4□□□□□ -0.42
HERC1-207ENST00000560316 APOA2P02652 100 aa12.4□□□□□ -0.42
HERC1-207ENST00000560316 CEACAM6P40199 344 aa12.4□□□□□ -0.42
HERC1-207ENST00000560316 ETV1P50549 477 aa12.4□□□□□ -0.42
HERC1-207ENST00000560316 RHOGP84095 191 aa12.4□□□□□ -0.42
HERC1-207ENST00000560316 C6orf201Q7Z4U5 140 aa12.4□□□□□ -0.42
HERC1-207ENST00000560316 WFDC3Q8IUB2 231 aa12.4□□□□□ -0.42
HERC1-207ENST00000560316 CACNG8Q8WXS5 425 aa12.4□□□□□ -0.42
HERC1-207ENST00000560316 NEDD4LQ96PU5 975 aa12.4□□□□□ -0.42
HERC1-207ENST00000560316 CHMP1AQ9HD42 196 aaPredicted RBP12.4□□□□□ -0.42
HERC1-207ENST00000560316 TECRQ9NZ01 308 aaKnown RBP12.4□□□□□ -0.42
HERC1-207ENST00000560316 PPP5D1E7EU14 171 aa12.39□□□□□ -0.43
HERC1-207ENST00000560316 LALBAP00709 142 aa12.39□□□□□ -0.43
HERC1-207ENST00000560316 HLA-AP01891 365 aaKnown RBP12.39□□□□□ -0.43
HERC1-207ENST00000560316 CAPGP40121 348 aa12.39□□□□□ -0.43
HERC1-207ENST00000560316 RPS11P62280 158 aaKnown RBP eCLIP12.39□□□□□ -0.43
HERC1-207ENST00000560316 ATP5G2Q06055 141 aa12.39□□□□□ -0.43
HERC1-207ENST00000560316 Q499Y3 187 aa12.39□□□□□ -0.43
HERC1-207ENST00000560316 ZNF880Q6PDB4 577 aa12.39□□□□□ -0.43
HERC1-207ENST00000560316 OR52B4Q8NGK2 314 aa12.39□□□□□ -0.43
HERC1-207ENST00000560316 RHOXF1Q8NHV9 184 aa12.39□□□□□ -0.43
HERC1-207ENST00000560316 KCNG3Q8TAE7 436 aa12.39□□□□□ -0.43
HERC1-207ENST00000560316 Q96MT0 163 aa12.39□□□□□ -0.43
HERC1-207ENST00000560316 SLC35D1Q9NTN3 355 aa12.39□□□□□ -0.43
HERC1-207ENST00000560316 MRPS18AQ9NVS2 196 aaKnown RBP12.39□□□□□ -0.43
HERC1-207ENST00000560316 TRBV5-7A0A0A0MS05 114 aa12.38□□□□□ -0.43
HERC1-207ENST00000560316 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.38□□□□□ -0.43
HERC1-207ENST00000560316 SPRY2O43597 315 aa12.38□□□□□ -0.43
HERC1-207ENST00000560316 NAPSAO96009 420 aa12.38□□□□□ -0.43
HERC1-207ENST00000560316 OR9G9P0C7N8 305 aa12.38□□□□□ -0.43
HERC1-207ENST00000560316 PRR20EP86478 221 aa12.38□□□□□ -0.43
HERC1-207ENST00000560316 PRR20CP86479 221 aa12.38□□□□□ -0.43
HERC1-207ENST00000560316 PRR20DP86480 221 aa12.38□□□□□ -0.43
HERC1-207ENST00000560316 PRR20BP86481 221 aa12.38□□□□□ -0.43
HERC1-207ENST00000560316 PRR20AP86496 221 aa12.38□□□□□ -0.43
HERC1-207ENST00000560316 ZNF45Q02386 682 aa12.38□□□□□ -0.43
HERC1-207ENST00000560316 MRGPRG-AS1Q2M3A8 158 aa12.38□□□□□ -0.43
HERC1-207ENST00000560316 TMEM61Q8N0U2 210 aa12.38□□□□□ -0.43
HERC1-207ENST00000560316 ZFP41Q8N8Y5 198 aa12.38□□□□□ -0.43
HERC1-207ENST00000560316 PHLDA1Q8WV24 401 aaPredicted RBP12.38□□□□□ -0.43
HERC1-207ENST00000560316 EDARADDQ8WWZ3 215 aa12.38□□□□□ -0.43
HERC1-207ENST00000560316 ZNF221Q9UK13 617 aa12.38□□□□□ -0.43
HERC1-207ENST00000560316 RPL36Q9Y3U8 105 aaKnown RBP12.38□□□□□ -0.43
HERC1-207ENST00000560316 FAM223BA6NKX1 122 aa12.37□□□□□ -0.43
HERC1-207ENST00000560316 M0R1X1 148 aa12.37□□□□□ -0.43
HERC1-207ENST00000560316 ATP8B1O43520 1251 aa12.37□□□□□ -0.43
HERC1-207ENST00000560316 SCAF4O95104 1147 aaKnown RBP12.37□□□□□ -0.43
HERC1-207ENST00000560316 OR2C1O95371 312 aa12.37□□□□□ -0.43
HERC1-207ENST00000560316 ZBTB25P24278 435 aa12.37□□□□□ -0.43
HERC1-207ENST00000560316 BMI1P35226 326 aa12.37□□□□□ -0.43
HERC1-207ENST00000560316 DEFB135Q30KP9 77 aa12.37□□□□□ -0.43
HERC1-207ENST00000560316 OR10K2Q6IF99 312 aa12.37□□□□□ -0.43
HERC1-207ENST00000560316 TMPRSS11AQ6ZMR5 421 aa12.37□□□□□ -0.43
HERC1-207ENST00000560316 FAM223AQ8IWN6 122 aa12.37□□□□□ -0.43
HERC1-207ENST00000560316 CDH26Q8IXH8 852 aa12.37□□□□□ -0.43
HERC1-207ENST00000560316 THRSPQ92748 146 aa12.37□□□□□ -0.43
HERC1-207ENST00000560316 HARBI1Q96MB7 349 aa12.37□□□□□ -0.43
HERC1-207ENST00000560316 BABAM2Q9NXR7 383 aa12.37□□□□□ -0.43
HERC1-207ENST00000560316 DMRT1Q9Y5R6 373 aa12.37□□□□□ -0.43
HERC1-207ENST00000560316 SRRM4A7MD48 611 aaKnown RBP12.36□□□□□ -0.43
HERC1-207ENST00000560316 DYNC1I1O14576 645 aa12.36□□□□□ -0.43
HERC1-207ENST00000560316 MPPED1O15442 326 aa12.36□□□□□ -0.43
HERC1-207ENST00000560316 TUSC2O75896 110 aa12.36□□□□□ -0.43
HERC1-207ENST00000560316 CBLN1P23435 193 aa12.36□□□□□ -0.43
HERC1-207ENST00000560316 YIF1BQ5BJH7 314 aa12.36□□□□□ -0.43
HERC1-207ENST00000560316 C1orf146Q5VVC0 180 aa12.36□□□□□ -0.43
HERC1-207ENST00000560316 ZNF57Q68EA5 555 aaPredicted RBP12.36□□□□□ -0.43
HERC1-207ENST00000560316 PTX4Q96A99 478 aa12.36□□□□□ -0.43
HERC1-207ENST00000560316 PGLYRP3Q96LB9 341 aa12.36□□□□□ -0.43
HERC1-207ENST00000560316 NICN1Q9BSH3 213 aa12.36□□□□□ -0.43
HERC1-207ENST00000560316 HDHD3Q9BSH5 251 aaPredicted RBP12.36□□□□□ -0.43
HERC1-207ENST00000560316 FGF20Q9NP95 211 aaPredicted RBP12.36□□□□□ -0.43
HERC1-207ENST00000560316 MLXQ9UH92 298 aa12.36□□□□□ -0.43
HERC1-207ENST00000560316 TP53TG1Q9Y2A0 90 aa12.36□□□□□ -0.43
HERC1-207ENST00000560316 DNAH6Q9C0G6 4158 aa12.36□□□□□ -0.43
HERC1-207ENST00000560316 TRBV9A0A0B4J1U6 114 aa12.35□□□□□ -0.43
HERC1-207ENST00000560316 SCTP09683 121 aa12.35□□□□□ -0.43
HERC1-207ENST00000560316 ATF4P18848 351 aaPredicted RBP12.35□□□□□ -0.43
HERC1-207ENST00000560316 HTR2CP28335 458 aa12.35□□□□□ -0.43
HERC1-207ENST00000560316 HLA-DRB3P79483 266 aa12.35□□□□□ -0.43
HERC1-207ENST00000560316 TNXAQ16473 311 aa12.35□□□□□ -0.43
HERC1-207ENST00000560316 SMN1Q16637 294 aaKnown RBP12.35□□□□□ -0.43
HERC1-207ENST00000560316 TM4SF20Q53R12 229 aa12.35□□□□□ -0.43
HERC1-207ENST00000560316 MOB1BQ7L9L4 216 aa12.35□□□□□ -0.43
HERC1-207ENST00000560316 APH1BQ8WW43 257 aa12.35□□□□□ -0.43
HERC1-207ENST00000560316 SRSF12Q8WXF0 261 aaKnown RBP12.35□□□□□ -0.43
HERC1-207ENST00000560316 LGALS9O00182 355 aa12.34□□□□□ -0.43
HERC1-207ENST00000560316 SHOXO15266 292 aa12.34□□□□□ -0.43
HERC1-207ENST00000560316 RPS27AP62979 156 aaKnown RBP12.34□□□□□ -0.43
HERC1-207ENST00000560316 C15orf32Q32M92 178 aa12.34□□□□□ -0.43
HERC1-207ENST00000560316 Q6ZWC4 215 aa12.34□□□□□ -0.43
HERC1-207ENST00000560316 DERL3Q96Q80 235 aa12.34□□□□□ -0.43
HERC1-207ENST00000560316 UQCC2Q9BRT2 126 aa12.34□□□□□ -0.43
HERC1-207ENST00000560316 KCNK15Q9H427 330 aa12.34□□□□□ -0.43
HERC1-207ENST00000560316 GHRLQ9UBU3 117 aa12.34□□□□□ -0.43
HERC1-207ENST00000560316 CLEC2DQ9UHP7 191 aa12.34□□□□□ -0.43
HERC1-207ENST00000560316 PNMA8CA0A1B0GUJ8 204 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms