RNA–Protein interactions for RNA: ENST00000559108.1

TPM1-217, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-217ENST00000559108 Q8N402 240 aa8.66□□□□□ -1.02
TPM1-217ENST00000559108 C5orf56Q8N8D9 126 aa8.66□□□□□ -1.02
TPM1-217ENST00000559108 Q8N9W7 124 aa8.66□□□□□ -1.02
TPM1-217ENST00000559108 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.66□□□□□ -1.02
TPM1-217ENST00000559108 OR13C8Q8NGS7 320 aa8.66□□□□□ -1.02
TPM1-217ENST00000559108 C15orf40Q8WUR7 153 aa8.66□□□□□ -1.02
TPM1-217ENST00000559108 ZFAND2BQ8WV99 257 aa8.66□□□□□ -1.02
TPM1-217ENST00000559108 S1PR3Q99500 378 aa8.66□□□□□ -1.02
TPM1-217ENST00000559108 SLC5A7Q9GZV3 580 aa8.66□□□□□ -1.02
TPM1-217ENST00000559108 TPSG1Q9NRR2 321 aa8.66□□□□□ -1.02
TPM1-217ENST00000559108 TAS2R8Q9NYW2 309 aa8.66□□□□□ -1.02
TPM1-217ENST00000559108 STAB1Q9NY15 2570 aa8.66□□□□□ -1.02
TPM1-217ENST00000559108 TMEM89A2RUT3 159 aa8.65□□□□□ -1.02
TPM1-217ENST00000559108 BTBD17A6NE02 478 aa8.65□□□□□ -1.02
TPM1-217ENST00000559108 SRRM4A7MD48 611 aaKnown RBP8.65□□□□□ -1.02
TPM1-217ENST00000559108 RNF212BA8MTL3 300 aa8.65□□□□□ -1.02
TPM1-217ENST00000559108 RAB3DO95716 219 aa8.65□□□□□ -1.02
TPM1-217ENST00000559108 IGLV2-23P01705 113 aa8.65□□□□□ -1.02
TPM1-217ENST00000559108 VSIG10L2P0DP72 767 aa8.65□□□□□ -1.02
TPM1-217ENST00000559108 PI3P19957 117 aa8.65□□□□□ -1.02
TPM1-217ENST00000559108 PTBP1P26599 531 aaKnown RBP eCLIP8.65□□□□□ -1.02
TPM1-217ENST00000559108 PPP5CP53041 499 aa8.65□□□□□ -1.02
TPM1-217ENST00000559108 RAG2P55895 527 aa8.65□□□□□ -1.02
TPM1-217ENST00000559108 SSBP2P81877 361 aaPredicted RBP8.65□□□□□ -1.02
TPM1-217ENST00000559108 SSBP1Q04837 148 aaKnown RBP8.65□□□□□ -1.02
TPM1-217ENST00000559108 MRGPRG-AS1Q2M3A8 158 aa8.65□□□□□ -1.02
TPM1-217ENST00000559108 KRTAP21-3Q3LHN1 58 aa8.65□□□□□ -1.02
TPM1-217ENST00000559108 SPANXN2Q5MJ10 180 aa8.65□□□□□ -1.02
TPM1-217ENST00000559108 DHRS7BQ6IAN0 325 aaPredicted RBP8.65□□□□□ -1.02
TPM1-217ENST00000559108 C11orf88Q6PI97 169 aa8.65□□□□□ -1.02
TPM1-217ENST00000559108 FAM71E2Q8N5Q1 922 aa8.65□□□□□ -1.02
TPM1-217ENST00000559108 BVESQ8NE79 360 aa8.65□□□□□ -1.02
TPM1-217ENST00000559108 LINC01006Q8NI28 216 aa8.65□□□□□ -1.02
TPM1-217ENST00000559108 RABL2AQ9UBK7 228 aaPredicted RBP8.65□□□□□ -1.02
TPM1-217ENST00000559108 ZNF107Q9UII5 783 aaPredicted RBP8.65□□□□□ -1.02
TPM1-217ENST00000559108 RABL2BQ9UNT1 228 aa8.65□□□□□ -1.02
TPM1-217ENST00000559108 RAMP3O60896 148 aa8.64□□□□□ -1.03
TPM1-217ENST00000559108 PEX14O75381 377 aa8.64□□□□□ -1.03
TPM1-217ENST00000559108 TSPAN9O75954 239 aa8.64□□□□□ -1.03
TPM1-217ENST00000559108 NDUFA7O95182 113 aa8.64□□□□□ -1.03
TPM1-217ENST00000559108 MOSP00540 346 aa8.64□□□□□ -1.03
TPM1-217ENST00000559108 CSF1P09603 554 aa8.64□□□□□ -1.03
TPM1-217ENST00000559108 FAM106CPP0CH98 169 aa8.64□□□□□ -1.03
TPM1-217ENST00000559108 IL7P13232 177 aa8.64□□□□□ -1.03
TPM1-217ENST00000559108 TBPP20226 339 aa8.64□□□□□ -1.03
TPM1-217ENST00000559108 BTCP35070 178 aa8.64□□□□□ -1.03
TPM1-217ENST00000559108 HERV-K104P61576 105 aa8.64□□□□□ -1.03
TPM1-217ENST00000559108 SRSF4Q08170 494 aaKnown RBP8.64□□□□□ -1.03
TPM1-217ENST00000559108 PHLDA2Q53GA4 152 aa8.64□□□□□ -1.03
TPM1-217ENST00000559108 ACTBL2Q562R1 376 aa8.64□□□□□ -1.03
TPM1-217ENST00000559108 Q8N2B8 174 aa8.64□□□□□ -1.03
TPM1-217ENST00000559108 OR51S1Q8NGJ8 323 aa8.64□□□□□ -1.03
TPM1-217ENST00000559108 OR6F1Q8NGZ6 308 aa8.64□□□□□ -1.03
TPM1-217ENST00000559108 OR2T10Q8NGZ9 312 aa8.64□□□□□ -1.03
TPM1-217ENST00000559108 HSPB9Q9BQS6 159 aa8.64□□□□□ -1.03
TPM1-217ENST00000559108 RSRP1Q9BUV0 290 aa8.64□□□□□ -1.03
TPM1-217ENST00000559108 GHITMQ9H3K2 345 aa8.64□□□□□ -1.03
TPM1-217ENST00000559108 HRASLSQ9HDD0 168 aa8.64□□□□□ -1.03
TPM1-217ENST00000559108 SLC35D1Q9NTN3 355 aa8.64□□□□□ -1.03
TPM1-217ENST00000559108 SERTAD4Q9NUC0 356 aa8.64□□□□□ -1.03
TPM1-217ENST00000559108 MOB4Q9Y3A3 225 aa8.64□□□□□ -1.03
TPM1-217ENST00000559108 WASHC3Q9Y3C0 194 aa8.64□□□□□ -1.03
TPM1-217ENST00000559108 RBM7Q9Y580 266 aaKnown RBP8.64□□□□□ -1.03
TPM1-217ENST00000559108 TET2Q6N021 2002 aaPredicted RBP8.63□□□□□ -1.03
TPM1-217ENST00000559108 RLN1P04808 185 aa8.63□□□□□ -1.03
TPM1-217ENST00000559108 CRYGBP07316 175 aa8.63□□□□□ -1.03
TPM1-217ENST00000559108 AKAIN1P0CW23 69 aa8.63□□□□□ -1.03
TPM1-217ENST00000559108 THBS3P49746 956 aa8.63□□□□□ -1.03
TPM1-217ENST00000559108 NDPQ00604 133 aa8.63□□□□□ -1.03
TPM1-217ENST00000559108 IFITM3Q01628 133 aa8.63□□□□□ -1.03
TPM1-217ENST00000559108 MSMO1Q15800 293 aa8.63□□□□□ -1.03
TPM1-217ENST00000559108 ABCA11PQ4W5N1 156 aa8.63□□□□□ -1.03
TPM1-217ENST00000559108 AWAT1Q58HT5 328 aa8.63□□□□□ -1.03
TPM1-217ENST00000559108 C10orf99Q6UWK7 81 aa8.63□□□□□ -1.03
TPM1-217ENST00000559108 LIAT1Q6ZQX7 453 aa8.63□□□□□ -1.03
TPM1-217ENST00000559108 KCTD9Q7L273 389 aa8.63□□□□□ -1.03
TPM1-217ENST00000559108 ARRDC1Q8N5I2 433 aa8.63□□□□□ -1.03
TPM1-217ENST00000559108 GDPD1Q8N9F7 314 aa8.63□□□□□ -1.03
TPM1-217ENST00000559108 MARCH1Q8TCQ1 289 aa8.63□□□□□ -1.03
TPM1-217ENST00000559108 C16orf95Q9H693 158 aa8.63□□□□□ -1.03
TPM1-217ENST00000559108 TNCP24821 2201 aa8.63□□□□□ -1.03
TPM1-217ENST00000559108 LINC00854A0A1B0GVQ3 168 aa8.62□□□□□ -1.03
TPM1-217ENST00000559108 H7C2Y5 167 aa8.62□□□□□ -1.03
TPM1-217ENST00000559108 FCN1O00602 326 aa8.62□□□□□ -1.03
TPM1-217ENST00000559108 PLA2G10O15496 165 aa8.62□□□□□ -1.03
TPM1-217ENST00000559108 PGLYRP1O75594 196 aaPredicted RBP8.62□□□□□ -1.03
TPM1-217ENST00000559108 NDUFA3O95167 84 aa8.62□□□□□ -1.03
TPM1-217ENST00000559108 CD40LGP29965 261 aa8.62□□□□□ -1.03
TPM1-217ENST00000559108 ARHGDIBP52566 201 aa8.62□□□□□ -1.03
TPM1-217ENST00000559108 UCP3P55916 312 aa8.62□□□□□ -1.03
TPM1-217ENST00000559108 PROK1P58294 105 aa8.62□□□□□ -1.03
TPM1-217ENST00000559108 TSPAN5P62079 268 aa8.62□□□□□ -1.03
TPM1-217ENST00000559108 ZNF45Q02386 682 aa8.62□□□□□ -1.03
TPM1-217ENST00000559108 PJVKQ0ZLH3 352 aa8.62□□□□□ -1.03
TPM1-217ENST00000559108 PSG5Q15238 335 aa8.62□□□□□ -1.03
TPM1-217ENST00000559108 MMDQ15546 238 aa8.62□□□□□ -1.03
TPM1-217ENST00000559108 SCGB2B2Q4G0G5 96 aa8.62□□□□□ -1.03
TPM1-217ENST00000559108 TMEM177Q53S58 311 aa8.62□□□□□ -1.03
TPM1-217ENST00000559108 LINC00299Q6ZSB3 139 aa8.62□□□□□ -1.03
TPM1-217ENST00000559108 VKORC1L1Q8N0U8 176 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms