RNA–Protein interactions for RNA: ENST00000558989.1

SPG11-214, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 1,816 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-214ENST00000558989 Q6ZPA2 131 aa7.71□□□□□ -1.18
SPG11-214ENST00000558989 Q6ZTK2 550 aa7.71□□□□□ -1.18
SPG11-214ENST00000558989 OR2W3Q7Z3T1 314 aa7.71□□□□□ -1.18
SPG11-214ENST00000558989 NR2C2APQ86WQ0 139 aa7.71□□□□□ -1.18
SPG11-214ENST00000558989 OR10A7Q8NGE5 316 aa7.71□□□□□ -1.18
SPG11-214ENST00000558989 FCGR1BQ92637 280 aa7.71□□□□□ -1.18
SPG11-214ENST00000558989 PECRQ9BY49 303 aa7.71□□□□□ -1.18
SPG11-214ENST00000558989 PRSS22Q9GZN4 317 aa7.71□□□□□ -1.18
SPG11-214ENST00000558989 LINC00574Q9H8X3 128 aa7.71□□□□□ -1.18
SPG11-214ENST00000558989 SSR3Q9UNL2 185 aa7.71□□□□□ -1.18
SPG11-214ENST00000558989 PLXNB1O43157 2135 aa7.7□□□□□ -1.18
SPG11-214ENST00000558989 A0A1W2PPI3 338 aa7.7□□□□□ -1.18
SPG11-214ENST00000558989 IFITM5A6NNB3 132 aa7.7□□□□□ -1.18
SPG11-214ENST00000558989 ZNF736B4DX44 427 aaPredicted RBP7.7□□□□□ -1.18
SPG11-214ENST00000558989 KCNAB3O43448 404 aa7.7□□□□□ -1.18
SPG11-214ENST00000558989 CD36P16671 472 aa7.7□□□□□ -1.18
SPG11-214ENST00000558989 ZNF182P17025 639 aaPredicted RBP7.7□□□□□ -1.18
SPG11-214ENST00000558989 GADD45AP24522 165 aa7.7□□□□□ -1.18
SPG11-214ENST00000558989 TGFBR1P36897 503 aa7.7□□□□□ -1.18
SPG11-214ENST00000558989 VDAC2P45880 294 aaPredicted RBP7.7□□□□□ -1.18
SPG11-214ENST00000558989 DYNLT3P51808 116 aa7.7□□□□□ -1.18
SPG11-214ENST00000558989 TMEM50BP56557 158 aa7.7□□□□□ -1.18
SPG11-214ENST00000558989 PRR20EP86478 221 aa7.7□□□□□ -1.18
SPG11-214ENST00000558989 PRR20CP86479 221 aa7.7□□□□□ -1.18
SPG11-214ENST00000558989 PRR20DP86480 221 aa7.7□□□□□ -1.18
SPG11-214ENST00000558989 PRR20BP86481 221 aa7.7□□□□□ -1.18
SPG11-214ENST00000558989 PRR20AP86496 221 aa7.7□□□□□ -1.18
SPG11-214ENST00000558989 ANKRD55Q3KP44 614 aa7.7□□□□□ -1.18
SPG11-214ENST00000558989 CT45A1Q5HYN5 189 aa7.7□□□□□ -1.18
SPG11-214ENST00000558989 CD200R1LQ6Q8B3 271 aa7.7□□□□□ -1.18
SPG11-214ENST00000558989 CT45A3Q8NHU0 189 aa7.7□□□□□ -1.18
SPG11-214ENST00000558989 MAFIPQ8WZ33 124 aa7.7□□□□□ -1.18
SPG11-214ENST00000558989 ST8SIA2Q92186 375 aa7.7□□□□□ -1.18
SPG11-214ENST00000558989 AUNIPQ9H7T9 357 aa7.7□□□□□ -1.18
SPG11-214ENST00000558989 DMRT1Q9Y5R6 373 aa7.7□□□□□ -1.18
SPG11-214ENST00000558989 TRAV1-2A0A0B4J238 106 aa7.69□□□□□ -1.18
SPG11-214ENST00000558989 IGHV1-3A0A0C4DH29 117 aa7.69□□□□□ -1.18
SPG11-214ENST00000558989 CA11O75493 328 aa7.69□□□□□ -1.18
SPG11-214ENST00000558989 APOA1P02647 267 aa7.69□□□□□ -1.18
SPG11-214ENST00000558989 GAPDHP04406 335 aaKnown RBP7.69□□□□□ -1.18
SPG11-214ENST00000558989 GLAP06280 429 aa7.69□□□□□ -1.18
SPG11-214ENST00000558989 FAM106CPP0CH98 169 aa7.69□□□□□ -1.18
SPG11-214ENST00000558989 CD37P11049 281 aa7.69□□□□□ -1.18
SPG11-214ENST00000558989 PSMD7P51665 324 aa7.69□□□□□ -1.18
SPG11-214ENST00000558989 LSM3P62310 102 aaKnown RBP7.69□□□□□ -1.18
SPG11-214ENST00000558989 NSUN5P1Q3KNT7 163 aa7.69□□□□□ -1.18
SPG11-214ENST00000558989 MORN2Q502X0 79 aa7.69□□□□□ -1.18
SPG11-214ENST00000558989 GAPTQ8N292 157 aa7.69□□□□□ -1.18
SPG11-214ENST00000558989 GALMQ96C23 342 aa7.69□□□□□ -1.18
SPG11-214ENST00000558989 CMSS1Q9BQ75 279 aaKnown RBP7.69□□□□□ -1.18
SPG11-214ENST00000558989 MRPL18Q9H0U6 180 aaKnown RBP7.69□□□□□ -1.18
SPG11-214ENST00000558989 ATG5Q9H1Y0 275 aa7.69□□□□□ -1.18
SPG11-214ENST00000558989 RANBP3Q9H6Z4 567 aaPredicted RBP7.69□□□□□ -1.18
SPG11-214ENST00000558989 SERTAD4Q9NUC0 356 aa7.69□□□□□ -1.18
SPG11-214ENST00000558989 ABRACLQ9P1F3 81 aa7.69□□□□□ -1.18
SPG11-214ENST00000558989 MBD2Q9UBB5 411 aa7.69□□□□□ -1.18
SPG11-214ENST00000558989 DAPK2Q9UIK4 370 aa7.69□□□□□ -1.18
SPG11-214ENST00000558989 NCBP2LA6PVI3 153 aaKnown RBP7.68□□□□□ -1.18
SPG11-214ENST00000558989 H3BS24 57 aa7.68□□□□□ -1.18
SPG11-214ENST00000558989 ST8SIA5O15466 376 aa7.68□□□□□ -1.18
SPG11-214ENST00000558989 OR2F2O95006 317 aa7.68□□□□□ -1.18
SPG11-214ENST00000558989 TSPAN15O95858 294 aa7.68□□□□□ -1.18
SPG11-214ENST00000558989 CD28P10747 220 aa7.68□□□□□ -1.18
SPG11-214ENST00000558989 VPREB1P12018 145 aa7.68□□□□□ -1.18
SPG11-214ENST00000558989 SNRPBP14678 240 aaKnown RBP7.68□□□□□ -1.18
SPG11-214ENST00000558989 GNB3P16520 340 aa7.68□□□□□ -1.18
SPG11-214ENST00000558989 IL3RAP26951 378 aa7.68□□□□□ -1.18
SPG11-214ENST00000558989 SDC2P34741 201 aa7.68□□□□□ -1.18
SPG11-214ENST00000558989 OR3A3P47888 321 aa7.68□□□□□ -1.18
SPG11-214ENST00000558989 RAB7AP51149 207 aa7.68□□□□□ -1.18
SPG11-214ENST00000558989 B2MP61769 119 aa7.68□□□□□ -1.18
SPG11-214ENST00000558989 HERPUD1Q15011 391 aa7.68□□□□□ -1.18
SPG11-214ENST00000558989 PDLIM3Q53GG5 364 aaPredicted RBP7.68□□□□□ -1.18
SPG11-214ENST00000558989 TREML4Q6UXN2 200 aa7.68□□□□□ -1.18
SPG11-214ENST00000558989 ZNF439Q8NDP4 499 aa7.68□□□□□ -1.18
SPG11-214ENST00000558989 AKR1E2Q96JD6 320 aa7.68□□□□□ -1.18
SPG11-214ENST00000558989 PARP12Q9H0J9 701 aaKnown RBP7.68□□□□□ -1.18
SPG11-214ENST00000558989 TMEM231Q9H6L2 316 aa7.68□□□□□ -1.18
SPG11-214ENST00000558989 RAB9BQ9NP90 201 aa7.68□□□□□ -1.18
SPG11-214ENST00000558989 MBNL3Q9NUK0 354 aaKnown RBP7.68□□□□□ -1.18
SPG11-214ENST00000558989 LINC00527Q9UJ94 153 aa7.68□□□□□ -1.18
SPG11-214ENST00000558989 ELF5Q9UKW6 265 aaPredicted RBP7.68□□□□□ -1.18
SPG11-214ENST00000558989 RAB22AQ9UL26 194 aa7.68□□□□□ -1.18
SPG11-214ENST00000558989 PKD1L1Q8TDX9 2849 aa7.68□□□□□ -1.18
SPG11-214ENST00000558989 OOSP1A8MZH6 123 aa7.68□□□□□ -1.18
SPG11-214ENST00000558989 M0QZ24 198 aa7.68□□□□□ -1.18
SPG11-214ENST00000558989 HSPA12AO43301 675 aa7.68□□□□□ -1.18
SPG11-214ENST00000558989 NAPSAO96009 420 aa7.68□□□□□ -1.18
SPG11-214ENST00000558989 SCTP09683 121 aa7.68□□□□□ -1.18
SPG11-214ENST00000558989 CD3GP09693 182 aa7.68□□□□□ -1.18
SPG11-214ENST00000558989 HMGN3Q15651 99 aa7.68□□□□□ -1.18
SPG11-214ENST00000558989 ACSM6Q6P461 480 aa7.68□□□□□ -1.18
SPG11-214ENST00000558989 C10orf99Q6UWK7 81 aa7.68□□□□□ -1.18
SPG11-214ENST00000558989 SLC16A12Q6ZSM3 486 aa7.68□□□□□ -1.18
SPG11-214ENST00000558989 SLC25A48Q6ZT89 311 aaKnown RBP7.68□□□□□ -1.18
SPG11-214ENST00000558989 TGIF2LXQ8IUE1 241 aa7.68□□□□□ -1.18
SPG11-214ENST00000558989 IZUMO1Q8IYV9 350 aa7.68□□□□□ -1.18
SPG11-214ENST00000558989 FAM89BQ8N5H3 189 aa7.68□□□□□ -1.18
SPG11-214ENST00000558989 RTN4IP1Q8WWV3 396 aaPredicted RBP7.68□□□□□ -1.18
SPG11-214ENST00000558989 RAB3CQ96E17 227 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms