RNA–Protein interactions for RNA: ENST00000558855.5

VPS18-203, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS18, Length 1,050 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-203ENST00000558855 HSPA12AO43301 675 aa10.41□□□□□ -0.74
VPS18-203ENST00000558855 SAP30O75446 220 aa10.41□□□□□ -0.74
VPS18-203ENST00000558855 CRYGBP07316 175 aa10.41□□□□□ -0.74
VPS18-203ENST00000558855 FCGR3AP08637 254 aa10.41□□□□□ -0.74
VPS18-203ENST00000558855 GSTT2P0CG29 244 aa10.41□□□□□ -0.74
VPS18-203ENST00000558855 GSTT2BP0CG30 244 aa10.41□□□□□ -0.74
VPS18-203ENST00000558855 ACTBL2Q562R1 376 aa10.41□□□□□ -0.74
VPS18-203ENST00000558855 ACSM6Q6P461 480 aa10.41□□□□□ -0.74
VPS18-203ENST00000558855 PRSS48Q7RTY5 328 aa10.41□□□□□ -0.74
VPS18-203ENST00000558855 GRPEL2Q8TAA5 225 aa10.41□□□□□ -0.74
VPS18-203ENST00000558855 RHOVQ96L33 236 aa10.41□□□□□ -0.74
VPS18-203ENST00000558855 CABLES2Q9BTV7 478 aa10.41□□□□□ -0.74
VPS18-203ENST00000558855 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.41□□□□□ -0.74
VPS18-203ENST00000558855 TPRKBQ9Y3C4 175 aa10.41□□□□□ -0.74
VPS18-203ENST00000558855 V9GY05 133 aa10.41□□□□□ -0.74
VPS18-203ENST00000558855 TNCP24821 2201 aa10.41□□□□□ -0.74
VPS18-203ENST00000558855 SRRM4A7MD48 611 aaKnown RBP10.4□□□□□ -0.74
VPS18-203ENST00000558855 DENRO43583 198 aaKnown RBP10.4□□□□□ -0.74
VPS18-203ENST00000558855 GNB3P16520 340 aa10.4□□□□□ -0.74
VPS18-203ENST00000558855 MC5RP33032 325 aa10.4□□□□□ -0.74
VPS18-203ENST00000558855 TPPP2P59282 170 aa10.4□□□□□ -0.74
VPS18-203ENST00000558855 ZNF562Q6V9R5 426 aa10.4□□□□□ -0.74
VPS18-203ENST00000558855 EDARADDQ8WWZ3 215 aa10.4□□□□□ -0.74
VPS18-203ENST00000558855 OR2D2Q9H210 308 aa10.4□□□□□ -0.74
VPS18-203ENST00000558855 RIMS4Q9H426 269 aaPredicted RBP10.4□□□□□ -0.74
VPS18-203ENST00000558855 SLC35D1Q9NTN3 355 aa10.4□□□□□ -0.74
VPS18-203ENST00000558855 SDHAF2Q9NX18 166 aa10.4□□□□□ -0.74
VPS18-203ENST00000558855 EPPK1P58107 5090 aaKnown RBP10.4□□□□□ -0.75
VPS18-203ENST00000558855 RAB27BO00194 218 aa10.39□□□□□ -0.75
VPS18-203ENST00000558855 BET1O15155 118 aa10.39□□□□□ -0.75
VPS18-203ENST00000558855 FABP7O15540 132 aa10.39□□□□□ -0.75
VPS18-203ENST00000558855 RBBP9O75884 186 aa10.39□□□□□ -0.75
VPS18-203ENST00000558855 ARL6IP5O75915 188 aa10.39□□□□□ -0.75
VPS18-203ENST00000558855 TRBV12-3P01733 135 aa10.39□□□□□ -0.75
VPS18-203ENST00000558855 TFAP2AP05549 437 aa10.39□□□□□ -0.75
VPS18-203ENST00000558855 OR8U9P0C7N5 309 aa10.39□□□□□ -0.75
VPS18-203ENST00000558855 NHLRC4P0CG21 123 aaPredicted RBP10.39□□□□□ -0.75
VPS18-203ENST00000558855 APELAP0DMC3 54 aa10.39□□□□□ -0.75
VPS18-203ENST00000558855 RPS16P62249 146 aaKnown RBP10.39□□□□□ -0.75
VPS18-203ENST00000558855 DCTN2Q13561 401 aaKnown RBP10.39□□□□□ -0.75
VPS18-203ENST00000558855 FXYD3Q14802 87 aa10.39□□□□□ -0.75
VPS18-203ENST00000558855 TBCEQ15813 527 aaPredicted RBP10.39□□□□□ -0.75
VPS18-203ENST00000558855 AKIRIN2Q53H80 203 aa10.39□□□□□ -0.75
VPS18-203ENST00000558855 PDPNQ86YL7 162 aa10.39□□□□□ -0.75
VPS18-203ENST00000558855 OR5T1Q8NG75 326 aa10.39□□□□□ -0.75
VPS18-203ENST00000558855 OR56B1Q8NGI3 324 aa10.39□□□□□ -0.75
VPS18-203ENST00000558855 ZMAT5Q9UDW3 170 aaKnown RBP10.39□□□□□ -0.75
VPS18-203ENST00000558855 SMAD5-AS1Q9Y6J3 95 aa10.39□□□□□ -0.75
VPS18-203ENST00000558855 DNAH1Q9P2D7 4330 aa10.38□□□□□ -0.75
VPS18-203ENST00000558855 A0A075B6Q4 140 aa10.38□□□□□ -0.75
VPS18-203ENST00000558855 TRBV6-7A0A0A0MS04 114 aa10.38□□□□□ -0.75
VPS18-203ENST00000558855 LINC00473A8K010 186 aa10.38□□□□□ -0.75
VPS18-203ENST00000558855 SPDEFO95238 335 aa10.38□□□□□ -0.75
VPS18-203ENST00000558855 TRGV3P03979 118 aa10.38□□□□□ -0.75
VPS18-203ENST00000558855 FRMD6-AS1P0C7T7 363 aa10.38□□□□□ -0.75
VPS18-203ENST00000558855 GP9P14770 177 aa10.38□□□□□ -0.75
VPS18-203ENST00000558855 INSL3P51460 131 aa10.38□□□□□ -0.75
VPS18-203ENST00000558855 PLECQ15149 4684 aaKnown RBP10.38□□□□□ -0.75
VPS18-203ENST00000558855 TRAM1Q15629 374 aa10.38□□□□□ -0.75
VPS18-203ENST00000558855 IZUMO2Q6UXV1 221 aa10.38□□□□□ -0.75
VPS18-203ENST00000558855 ZNF429Q86V71 674 aa10.38□□□□□ -0.75
VPS18-203ENST00000558855 Q8N1Y9 231 aa10.38□□□□□ -0.75
VPS18-203ENST00000558855 TCTEX1D1Q8N7M0 179 aa10.38□□□□□ -0.75
VPS18-203ENST00000558855 BVESQ8NE79 360 aa10.38□□□□□ -0.75
VPS18-203ENST00000558855 OR4A4PQ8NGN8 299 aa10.38□□□□□ -0.75
VPS18-203ENST00000558855 OR10R2Q8NGX6 335 aa10.38□□□□□ -0.75
VPS18-203ENST00000558855 RAB3CQ96E17 227 aa10.38□□□□□ -0.75
VPS18-203ENST00000558855 CNBD2Q96M20 576 aa10.38□□□□□ -0.75
VPS18-203ENST00000558855 RNF5Q99942 180 aa10.38□□□□□ -0.75
VPS18-203ENST00000558855 ACOT13Q9NPJ3 140 aa10.38□□□□□ -0.75
VPS18-203ENST00000558855 GAR1Q9NY12 217 aaKnown RBP10.38□□□□□ -0.75
VPS18-203ENST00000558855 ZNF221Q9UK13 617 aa10.38□□□□□ -0.75
VPS18-203ENST00000558855 ANKRD34BA5PLL1 514 aa10.37□□□□□ -0.75
VPS18-203ENST00000558855 IFITM5A6NNB3 132 aa10.37□□□□□ -0.75
VPS18-203ENST00000558855 HSPB1P04792 205 aaKnown RBP10.37□□□□□ -0.75
VPS18-203ENST00000558855 HIST1H1DP16402 221 aaKnown RBP10.37□□□□□ -0.75
VPS18-203ENST00000558855 PSMA1P25786 263 aaKnown RBP10.37□□□□□ -0.75
VPS18-203ENST00000558855 SRSF7Q16629 238 aaKnown RBP eCLIP10.37□□□□□ -0.75
VPS18-203ENST00000558855 IL34Q6ZMJ4 242 aa10.37□□□□□ -0.75
VPS18-203ENST00000558855 POC5Q8NA72 575 aa10.37□□□□□ -0.75
VPS18-203ENST00000558855 DDB2Q92466 427 aa10.37□□□□□ -0.75
VPS18-203ENST00000558855 RCHY1Q96PM5 261 aa10.37□□□□□ -0.75
VPS18-203ENST00000558855 TSNAXQ99598 290 aaKnown RBP10.37□□□□□ -0.75
VPS18-203ENST00000558855 NDUFB11Q9NX14 153 aa10.37□□□□□ -0.75
VPS18-203ENST00000558855 RAB22AQ9UL26 194 aa10.37□□□□□ -0.75
VPS18-203ENST00000558855 MGAT4AQ9UM21 535 aa10.37□□□□□ -0.75
VPS18-203ENST00000558855 APOA2P02652 100 aa10.36□□□□□ -0.75
VPS18-203ENST00000558855 DYRK1AQ13627 763 aa10.36□□□□□ -0.75
VPS18-203ENST00000558855 C22orf42Q6IC83 251 aa10.36□□□□□ -0.75
VPS18-203ENST00000558855 IDO2Q6ZQW0 420 aa10.36□□□□□ -0.75
VPS18-203ENST00000558855 C19orf35Q6ZS72 473 aa10.36□□□□□ -0.75
VPS18-203ENST00000558855 ZNF367Q7RTV3 350 aa10.36□□□□□ -0.75
VPS18-203ENST00000558855 H1FOOQ8IZA3 346 aaPredicted RBP10.36□□□□□ -0.75
VPS18-203ENST00000558855 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.36□□□□□ -0.75
VPS18-203ENST00000558855 FLYWCH2Q96CP2 140 aaKnown RBP10.36□□□□□ -0.75
VPS18-203ENST00000558855 HARBI1Q96MB7 349 aa10.36□□□□□ -0.75
VPS18-203ENST00000558855 GHITMQ9H3K2 345 aa10.36□□□□□ -0.75
VPS18-203ENST00000558855 TENM2Q9NT68 2774 aa10.35□□□□□ -0.75
VPS18-203ENST00000558855 TRAV1-2A0A0B4J238 106 aa10.35□□□□□ -0.75
VPS18-203ENST00000558855 J3QRK9 145 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms